mRNA_P-littoralis_Contig1030.25.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 394 bits (1012), Expect = 1.390e-134 Identity = 187/241 (77.59%), Postives = 209/241 (86.72%), Query Frame = 1
Query: 4 RFRMDYTEFTALADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
RFRMDYTEF LAD+LRPKLER+++ G G + VEFQLAM LRFLAGGSVFEVMD NVI +STAYAIVHRV+DAINQ+REL+C WP+GEDA C MY +RSTNGVI+ CVGAMDGLFVR+ QPSLRRH NP SFYSGHKKGFG+NFQGVCNARYEI AWTMNCPGS NDRTAFKHS F ++ TLP G +IVGDAAYP S +VLVPYPGT+++RSQDAYNFYQSQARISIEQAFGI+V
Sbjct: 69 RFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMV 309
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 392 bits (1008), Expect = 7.100e-134 Identity = 187/242 (77.27%), Postives = 208/242 (85.95%), Query Frame = 1
Query: 1 KRFRMDYTEFTALADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
KRFRMDYT+F LADILRPKL+RD++ G GA+ VEFQLAMTLRFLAGGSVFEVMDSNVI KSTAYAIVHRV+DAINQ+R+L C WP G+DA +Y +RSTNGVI+RCVGAMDGLFVRL+ P L+RHA P SFYSGHKK FG+NFQG+CNA YEI WTMNCPGSQNDRTAFKHSGFD L+ +P CFIVGDAAYP S+RVLVP PGTA++ SQDAYNFYQSQARISIEQAFGILV
Sbjct: 72 KRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILV 313
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 303 bits (776), Expect = 1.000e-99 Identity = 140/193 (72.54%), Postives = 161/193 (83.42%), Query Frame = 1
Query: 148 GGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
GGS+FEVMD V KSTAYAIV+RV+DAINQ+RE +C WP+G+DA C +Y QRSTN VI CVGAMDGLFV + +PSLRRH NP FYSGHKKGFG+NFQ VCNARY+ITAWTMNCPGS NDRTAFKHSGF+ ++ TLP G +IVGD AYP S +VLVPYPGT ++ SQD+YNFYQSQARI IEQAFG +V
Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMV 243
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 292 bits (747), Expect = 1.860e-94 Identity = 135/230 (58.70%), Postives = 176/230 (76.52%), Query Frame = 1
Query: 37 LADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
L D LRP L+++QQ G GA+ VE Q+AMTLR+LAGGS++E MD +VI +STAY + V++A+N EL C WP+GEDAAR ++ RS+ V+++CVGA DGLFVR+++PS + A P +Y+GHKKGFG+NFQ VC+A+Y I AW MNCPGSQNDRTAF SGFD L+ LP+G F+VGDAAY S RV+VP+PGT++S SQDA N+Y SQ R++IEQ +GILV
Sbjct: 73 LVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 302
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 217 bits (553), Expect = 1.610e-65 Identity = 107/214 (50.00%), Postives = 145/214 (67.76%), Query Frame = 1
Query: 4 RFRMDYTEFTALADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTA 645
RFRM+Y +F L D LRP L+++++ G GA+ VE+Q+AMTLR+LAGGS++E MD +VI +STAY + V++A+N EL C WP+GED + V+++CVGAMDGLFVR+++PS + A P +Y+GHKKGFG+NFQ VC SQNDRTAF SGFD L+ LP+G F+VG+AAY S RV+VP+PGT+
Sbjct: 73 RFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTS 270
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.320e-56 Identity = 84/134 (62.69%), Postives = 109/134 (81.34%), Query Frame = 1
Query: 325 VIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
V+++CVGAMDGLFVR+++PS + A P +Y+GHK GFG+NFQ VC+A+Y I AWTM+CPGSQNDRTAF + FD L+ LP+G F+VGDAAY S RV+VP+PGT++S SQDA N+Y SQ R++IEQ +GILV
Sbjct: 17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 150
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.800e-55 Identity = 109/246 (44.31%), Postives = 147/246 (59.76%), Query Frame = 1
Query: 1 KRFRMDYTEFTALADILRPKLERDQQQGERPG--GAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSREL-ECSWPQG-EDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
+ +RM+ F LAD+LRP LER+ + GAV V+ +LA+ LR LAG S +V I K T + ++ VVDAIN + E+ +PQ E+ AR +E +ST G I CV A DGLFV+ + PS N S++SG+K G+GLN Q C+A Y + + G+ ND TA+ S + LP G +++GDAAYP S ++L PYPG + R QDAYNFY SQ R+ IEQAFGILV
Sbjct: 89 RTYRMEEGCFDKLADLLRPILERNDFYARKRTRHGAVPVKHRLAVALRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTGGAISGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLSQLRVKIEQAFGILV 334
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE) HSP 1 Score: 188 bits (477), Expect = 1.060e-53 Identity = 104/246 (42.28%), Postives = 144/246 (58.54%), Query Frame = 1
Query: 1 KRFRMDYTEFTALADILRPKLERDQQQGE--RPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSREL-ECSWPQG-EDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
+ +RM+ F LA++LRP LER+ GAV V+ +LA+ LR AG S +V I K + + ++ +VVDAIN + + +PQ E+ R +E +ST G CV A DGLFV+ P++ N SF+SGHK G+GLN Q C+A Y + + GS ND TA+ S + + LP G +++GDAAYP S ++L PYPG + R QDA+NFY SQ R+ IEQAFGILV
Sbjct: 86 RMYRMEEHSFDKLAELLRPILERNDYSARLRTSSGAVPVKIRLAVALRMFAGASYIDVALLFGIAKESVFNVMWQVVDAINNTPTVGPFFFPQTVEECTRQAREWEVKSTGGAFAGCVAAGDGLFVKTFAPTVVNTPNVLSFFSGHKNGYGLNIQATCDANYRFCSMSAIAAGSTNDWTAWNRSELSDSVARLPPGFYMLGDAAYPLSDQLLTPYPGKLLPRDQDAFNFYLSQLRVKIEQAFGILV 331
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE) HSP 1 Score: 182 bits (462), Expect = 2.230e-51 Identity = 100/246 (40.65%), Postives = 142/246 (57.72%), Query Frame = 1
Query: 1 KRFRMDYTEFTALADILRPKLERDQQQGERP--GGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSREL-ECSWPQGED-AAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
+ +RM+ F LA +L P L+ + GAV + +LA+ LR +AG S + + K TA++I+ +VVDAIN + E+ +PQ ED R +E++ST G + V A DGLFV+ + P+ N S+YSG K G+G+N Q C+A Y + + PGS ND TA+ HS + LP G +++GDAAYP S +L PYPG + +DA+NFY SQ R+ IEQAFGILV
Sbjct: 92 RMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILV 337
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 175 bits (444), Expect = 6.530e-50 Identity = 97/241 (40.25%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 4 RFRMDYTEFTALADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
RFRM+Y +F L D LRP L ++++ G GA+ VE+Q+AMTLR+LAGGS++E MD +VI +STAY + V++A+N EL C WP+ V+++CVGAMDGLFVR+++PS + A P +Y+GH+KG +VGDAAY S RV+VP+PGT++S SQDA N Y SQ R++IEQ +GILV
Sbjct: 73 RFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEAR--------------MDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILV 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1030.25.1 >prot_P-littoralis_Contig1030.25.1 ID=prot_P-littoralis_Contig1030.25.1|Name=mRNA_P-littoralis_Contig1030.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=147bp MYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNback to top mRNA from alignment at P-littoralis_Contig1030:68403..69926- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1030.25.1 ID=mRNA_P-littoralis_Contig1030.25.1|Name=mRNA_P-littoralis_Contig1030.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1524bp|location=Sequence derived from alignment at P-littoralis_Contig1030:68403..69926- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1030:68403..69926- >mRNA_P-littoralis_Contig1030.25.1 ID=mRNA_P-littoralis_Contig1030.25.1|Name=mRNA_P-littoralis_Contig1030.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=441bp|location=Sequence derived from alignment at P-littoralis_Contig1030:68403..69926- (Pylaiella littoralis U1_48)back to top |