mRNA_P-littoralis_Contig103.95.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig103.95.2
Unique NamemRNA_P-littoralis_Contig103.95.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 2.810e-143
Identity = 204/342 (59.65%), Postives = 258/342 (75.44%), Query Frame = 3
Query:  525 LVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1550
            LVD LRP L++N  MG LRNGA+PVE QV  TLRWLAGG + +   GHVIA+STAY     VI A+NAC  L C+WPE + D    A  F++RS+  V+ KCVGA DGLFVR ++P++++  EPN +Y+GHKKGFGMNFQA+CDAQYRI AW MNCPGSQNDRTAF  SGF KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   73 LVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 413          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 422 bits (1085), Expect = 3.350e-139
Identity = 214/385 (55.58%), Postives = 266/385 (69.09%), Query Frame = 3
Query:  387 DKHQKPKHRSTLVRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1541
            D+   P+ R   VRR+RRSW  Y+KP++ DGTFR  FRMD+ +F  L DMLRP+LERN  MG+LRNG +PVE+Q+   LR+LAGG + ++  G+VIA+STAY    RVI AIN    L+C WPE +   D     ++ RSTNGVI  CVGAMDGLFVR  +P+ R    P SFYSGHKKGFGMNFQ +C+A+Y I AWTMNCPGS NDRTAFK S F  +L+ LP G YIVGDAAYP SD VLVPYPGT ++ SQDA N+Y SQ RI+IEQ FGI+V+ WGILW+PL++RL  V+ ++ S+VRLHNF R R+  +P      V  P  + F   G     +F+T P+  GR  R   R SAPRE IR+ LEQ  +GRP  N+ RN
Sbjct:   34 DEGDPPQTRDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRRARIPR-SPWRVTQPVEVRFRPDGSLEGTYFDTVPTR-GRQTRG-GRASAPREAIRQYLEQYSIGRPRWNLQRN 414          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 400 bits (1029), Expect = 1.100e-130
Identity = 207/383 (54.05%), Postives = 264/383 (68.93%), Query Frame = 3
Query:  402 PKHRSTLVRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1550
            P HR   V R+RRS+  Y +P++ D TFR  FRMD+ DFM L D+LRP+L+R+  MG+LRNGA+PVE+Q+  TLR+LAGG + ++   +VIAKSTAY    RVI AIN    L C+WP    D ++ A  ++ RSTNGVI +CVGAMDGLFVR + P  +    P SFYSGHKK FGMNFQ IC+A Y I  WTMNCPGSQNDRTAFK SGF  LL  +P   +IVGDAAYP S+ VLVP PGT ++ SQDA N+Y SQ RI+IEQ FGILV+ W ILWKPL +RL  V  ++ ++VRLHNF R R+  V    A +V +P ++ F+  G     +++T P+  GRP++  A V  PRE IR  L+Q  MGRP  N++RN +R
Sbjct:   43 PAHRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGD-DAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRRRAPV-LQSAWNVPMPESVTFHPDGGIDGSYYDTVPTR-GRPSKA-AEVCMPREIIRDYLDQKSMGRPRFNLNRNVNR 421          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 6.610e-121
Identity = 192/382 (50.26%), Postives = 251/382 (65.71%), Query Frame = 3
Query:  405 KHRSTLVRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1550
            ++RSTLV R+RR +  Y KP+L D TF   FRM++DDF  LVD LRP L++N   G LRNGA+PVEYQV  TLRWLAGG + +   GHVIA+STAY     VI A+NAC  L C+WPE + D     +   + +   V+ KCVGAMDGLFVR ++P++++  EPN +Y+GHKKGFGMNFQ +C               SQNDRTAF  SGF KLL  LP+G+++VG+AAY  S+ V+VP+PGT                    EQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFC DRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   44 RNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 392          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 1.430e-104
Identity = 149/245 (60.82%), Postives = 193/245 (78.78%), Query Frame = 3
Query:  816 VIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1550
            V+ KCVGAMDGLFVR ++P++++  EPN +Y+GHK GFGMNFQA+CDAQYRI AWTM+CPGSQNDRTAF  + F KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 261          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 3.620e-100
Identity = 162/302 (53.64%), Postives = 202/302 (66.89%), Query Frame = 3
Query:  636 GGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1541
            GG + ++  G V AKSTAY    RVI AIN     +C WPE     D     ++ RSTN VI  CVGAMDGLFV    P+ R    P  FYSGHKKGFGMNFQA+C+A+Y+I AWTMNCPGS NDRTAFK SGF ++L+ LPKG YIVGD AYP SD VLVPYPGT ++ SQD+ N+Y SQ RI IEQ FG +V+ WGILW+PL+++LG V+ ++ ++VRLHNF R  + +VP      V  P  + F   G     +++T P+  GRP   Q RVSAPRE IR+ L+Q  +GRP  N+ RN
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGV-YRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLRRWRAKVPQ-SPWRVDQPQEVRFAPDGSLEGTYYDTVPTR-GRPTTGQ-RVSAPREAIRQYLKQYSIGRPRWNLQRN 348          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 1.760e-96
Identity = 174/380 (45.79%), Postives = 214/380 (56.32%), Query Frame = 3
Query:  411 RSTLVRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1550
            RSTLV R RR +  Y KP+L D TF   FRM++DDF  LVD LRP L++N  MG LRNGA+PVEYQV  TLRWLAGG   +   GHVIA+STAY                                                                                    A+CDAQYRI AW MNCPGSQNDRTAF  SGF KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILV   G+    +E        +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   46 RSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYH-----------------------------------------------------------------------------------AVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 335          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 2.930e-89
Identity = 162/382 (42.41%), Postives = 215/382 (56.28%), Query Frame = 3
Query:  405 KHRSTLVRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1550
            ++RSTLV R+RR +  + KPLL D TF   FRM++DDF  L+D LRP L +N  MG LR GA+PVEYQ+  TLRWLAGG + +   GHVIA+STAY     VI A+NAC  L C+WPE + D               V+ KCVGAMDGLFVR ++P++++  EPN +Y+GH+KG                                                 +VGDAAY  S+ V+VP+PGT +S SQDA N Y+SQ R+AIEQT+GILVRRWGILW+P+E+R+     +V                                F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+ +R
Sbjct:   44 RNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD---------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV-------------------------------AFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLIRPEHNIARSHNR 331          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 1.580e-66
Identity = 126/311 (40.51%), Postives = 179/311 (57.56%), Query Frame = 3
Query:  402 PKHRSTLVRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLR--NGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINAC-EALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKV 1325
            P  R  +   QR  W  ++  L     F+  +RM    F  L ++L P L  N H   LR  NGA+ V+ ++   LR LAG   LD+     +   T Y T   VI AIN+  E     +P+ + D    AA FK +STNG+ + CV  +DGLFV+TL P+ +DT    ++YSG K  +G+N QA+C A YR  + +   PG+ ND  A+  S   + +  LPKG+Y++GDAAYP S+ +L PYPG  +   +D+ N++LSQ R+ IEQ+FGILV  WGILW+PL++       L+ +L RLHNF RD +V
Sbjct:   56 PAIRRPVYEPQRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLRDEQV 366          
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.710e-63
Identity = 141/385 (36.62%), Postives = 208/385 (54.03%), Query Frame = 3
Query:  402 PKHRSTLVRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLR---NGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEAL-ECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFNQSGEFS-NDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1541
            P+ R  +   +R  WA +   L     +R S+R++   F  LV++LRP LE     G+LR   NGA+ VE +V   L  LA     D+     ++ +  Y     VI AIN   A+    +P  +      A  FK +ST+G+ +  V A+DGLF++   P +++T    ++YSG K  +G+N QA+C A YR  A +   PGS ND  A+  S   K +  LP G++I+GDAAYP  + +L PYPG ++   +D+ N++LSQ R+ IEQ+FGILV  WGILW+PL ++LG  A L+ +L  LHNF +D KV    +   D R   N     + + +  D + TEP+ S R     AR +     IR+ LE     RP +N+ RN
Sbjct:   68 PQEREPINEPKRLPWAQHEADLDKRRGWRRSYRLEKGSFHKLVELLRPSLEVIAFFGALRSPRNGAIAVEVRVAVALTILADASYWDVLLMFGLSVAVTYLVLWEVIDAINNTPAVGPFAFPLTEKGCMRNANRFKDKSTDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQLGGRADLITALFHLHNFLQDEKVAPIQLSEEDSRSRLNRPALCATQHTLPDDWGTEPAPS-RSGETPARAA-----IRKALELKKQWRPDYNLQRN 446          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig103.95.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6B6_9PHAE2.810e-14359.65DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5K3F2_9PHAE3.350e-13955.58DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE1.100e-13054.05DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE6.610e-12150.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNF2_9PHAE1.430e-10460.82DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE3.620e-10053.64DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K540_9PHAE1.760e-9645.79DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JVS8_9PHAE2.930e-8942.41DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE1.580e-6640.51DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KNZ9_9PHAE1.710e-6336.62DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig103contigP-littoralis_Contig103:563712..566899 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size2001
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons4
Evalue6.86e-50
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size1227
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig103.95.2prot_P-littoralis_Contig103.95.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig103 564154..566535 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789369.6513474-UTR-P-littoralis_Contig103:563711..5641531680789369.6513474-UTR-P-littoralis_Contig103:563711..564153Pylaiella littoralis U1_48UTRP-littoralis_Contig103 563712..564153 -
1680789369.6989295-UTR-P-littoralis_Contig103:566535..5666991680789369.6989295-UTR-P-littoralis_Contig103:566535..566699Pylaiella littoralis U1_48UTRP-littoralis_Contig103 566536..566699 -
1680789369.7115936-UTR-P-littoralis_Contig103:566731..5668991680789369.7115936-UTR-P-littoralis_Contig103:566731..566899Pylaiella littoralis U1_48UTRP-littoralis_Contig103 566732..566899 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789369.6633863-CDS-P-littoralis_Contig103:564153..5644981680789369.6633863-CDS-P-littoralis_Contig103:564153..564498Pylaiella littoralis U1_48CDSP-littoralis_Contig103 564154..564498 -
1680789369.6769469-CDS-P-littoralis_Contig103:564743..5650131680789369.6769469-CDS-P-littoralis_Contig103:564743..565013Pylaiella littoralis U1_48CDSP-littoralis_Contig103 564744..565013 -
1680789369.6864603-CDS-P-littoralis_Contig103:565923..5665351680789369.6864603-CDS-P-littoralis_Contig103:565923..566535Pylaiella littoralis U1_48CDSP-littoralis_Contig103 565924..566535 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig103.95.2

>prot_P-littoralis_Contig103.95.2 ID=prot_P-littoralis_Contig103.95.2|Name=mRNA_P-littoralis_Contig103.95.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=409bp
MLTQLLDLLTLLDKLESLDKHQKPKHRSTLVRRQRRSWAAYSKPLLADGT
FRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWL
AGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSI
AAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFG
MNFQAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVG
DAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGI
LWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTVEAGDVRIPSNIGFN
QSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNI
SRNKDRKR*
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mRNA from alignment at P-littoralis_Contig103:563712..566899-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig103.95.2 ID=mRNA_P-littoralis_Contig103.95.2|Name=mRNA_P-littoralis_Contig103.95.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3188bp|location=Sequence derived from alignment at P-littoralis_Contig103:563712..566899- (Pylaiella littoralis U1_48)
ATTAACGGAAGGCCAATAAAAACGAAATAGCGGAAACAAAAACGAAATAA CTTCGTTCTTCTGGAAAAAAAAAAAAAAACTCCCTTTCGGTATTAACGCG TTTCTGCTGCGAGGAGCTGGAGCAGCGGAATAGAGGAGATGACGCCAAAA ATGATGTAAACCCAGAGCGCGATAACGCCAAAAATGATGTAAACCCAGAG CGCGCGGGGCCCAATTCCAAAAGACGCGGTGGAATGCAGCTCGCGGAACG TACAGCGCACGCCACGACCAGCTCTCGGCAACAACACGGCCATCCTGCTC GACTACGGGGCCTCCTCCTAGCTCAAGAACCAAGCGCCTTCGCCGTTTGG CGAAGTTGACGGCAATGTTAACGCAGCTGCTGGATCTGCTGACTTTGTTG GACAAGCTGGAATCGTTGGACAAGCATCAGAAACCGAAGCACCGCAGCAC GCTGGTCCGGCGTCAAAGGCGAAGCTGGGCGGCTTACAGCAAGCCCCTCC TCGCAGACGGGACCTTCAGATCGAGTTTCCGCATGGACCACGACGACTTC ATGGACCTGGTGGATATGCTCCGCCCTGAACTGGAGAGAAACCCTCACAT GGGGAGCCTTCGCAACGGTGCGGTCCCTGTAGAGTACCAGGTCGGGAATA CTCTGCGGTGGTTGGCTGGTGGTCAAATGCTCGACATCAAGCAAGGCCAT GTGATCGCGAAGAGCACGGCGTACCAGACGGCCGTCCGTGTCATCAAGGC GATCAATGCCTGTGAGGCGCTGGAATGCCGATGGCCCGAGAAACAGACGG ATTACGACAGCATCGCGGCCGGGTTCAAGAGCCGCAGCACGAACGGTGTG ATCGCCAAGTGCGTGGGAGCCATGGACGGGCTTTTCGTCCGCACCCTGAG GCCGAACTCCCGGGACACACATGAGCCCAACTCCTTCTACAGTGGCCACA AGAAGGGTTTCGGGATGAACTTCCAGGCAAGAACAATGATTAAGCGCCTA CTTGGTTGGGGGTGCTGCTATTTTTTTTTGATAAGGGATGAAACATTAGG AATCATGTGCCCCGAACGCCGCTGCGGCAGCAGCAGATACTTTTGCCGGT GCTGTTTGCTGTAATTGTTGTAGATTCTCACATTAGCTCACTACCGCCGC AGTCTCGCCCGTGGTCACAAACCATTCACATATCGTGCAAAAAGAAATAA AAACCAAATAAATGGACCATTATCACCCACAGTCAAATCAGAGAGGGTAC CGTTGGGGTACCATCTGTGGTGGTCAAAGTATCAAACAAAATACAGAAAA AAATAGGTTCGACAGAAAAAAACAAAAAAGGACCAACAAAAAATTGTCAA CAGTACGACGAAAAACAAAACAAAAACAAAAACAAGACAAACCTCAACCA TAACCAAATACTTCGAAATACTTCGTACATCGAACCAGGGCCCAGGGCCA TGACAGACCAAGGCAAAGGCTGTAATACCATGAGGGGGTGCAGATCTCGG GAATGTTGCGGAGGTATCACATATTTCGGACATAATAATTTAACACAACG TGACTCCCGTGATATATGCTGTGTAACTTTCAAGCAGCGTTGTCGACGTA GGTCACATACCACGTTATCCCACGTCAGCGACGAAGTTCATCGTCACAGC GCGTGACATGTGCTGCGGCCGAAATAAATTTTGTTGGCGGTGAATGCACA GGGTTGAAGTTGTCCGTAGTACAGCAGCGGTACGGAGCCTTTTCTGAATC TTTGTCGGCGTCGTGCACAGGAAAATATATTTTCGTACGACGTTCGTACA ATGCAGTGGAGGCGCTTGCTACTGTTGTGCGTTCCCTCGCATCTGACACC ATCTACGCACAAACTCGATGTTGATCTGTTGAACAGGCTATCTGCGACGC GCAATACAGGATCAGGGCATGGACTATGAACTGCCCGGGAAGCCAAAACG ACCGCACGGCCTTTAAGGTTTCCGGCTTCCCCAAGCTCCTCGAAGCTTTG CCGAAAGGTTACTACATCGTGGGGGACGCGGCGTACCCGGGTTCGGACGT CGTTCTCGTTCCGTACCCGGGAACGAAGGTGTCGGATAGCCAGGATGCGT TGAACTACTACCTGTCTCAGTGCAGGATTGCCATCGAGCAGACGTTCGGG ATCCTGGTGAGTATCAAGTGTCAACTTCTGTGTTCGCATAGAACGGGTGC TGTTGTTGTCGGATACTATTTTGTTCTCGTGCACGTAAAACTTAGGTTTT ACGTGTGGGTCTGCACGGGGTGATTTCTTCGGAACAGTCTTGTTGCGTGA GTTTTGCTGAACCTTATAGATCACGAGCACACGAGCAGGTTTCTATATCA TTCATTCCTGACTGTCCACCTATTTTTGGCGTTTCTCTTGATGATATGTA GGTCAGGAGGTGGGGCATCCTCTGGAAGCCGTTGGAGCTCCGGCTGGGCA ACGTTGCCCCGCTTGTCGAGAGTCTCGTTCGCCTGCACAACTTCTGCCGA GACCGAAAGGTGGAGGTGCCAACGGTGGAGGCTGGAGACGTTCGTATCCC CAGCAACATCGGCTTCAACCAAAGCGGAGAGTTCAGCAACGACTTTTTCG AAACCGAGCCCTCCTCGTCTGGTCGCCCGGCGAGAAACCAGGCTCGGGTG TCGGCTCCCCGGGAGGACATCCGCCGACAGCTCGAACAACTAGGCATGGG GCGGCCGGCGCACAACATTTCTAGGAACAAAGACCGCAAGCGGTGAATCG TTGAATTAATTGTGTCGAGGGCACGGTGTTCGTCGCAGTTTACGTTTGGG ATGGGGGTATTGCTTATCTATCCTCTCGGTTTGAGTGCAGGTCGCGGTAG GTAGGCGCGTGCGCTCGGCCTATGGGGTAATGCCCCAGATAACCTCTGCC ACGTCGAGGAAAGGAAACTAACATGGGTGGACTTTCTTTGTCTCTTTGGT TTTGGAACGGGCTTTGTGTGTCTCAAGTTGATTTGTCGTCTTCTTACGGC TTCCTCTTCAAATTTTTCTAATGCTCACACCTCTATATGTTGTGTGTGTT GGGACAGTATTCATGTATTGTATATTGTCGCGGAGGAATGCTGTGTTGAT TGTGAGGAAGATCAATTACCTTGGATAGCCTTTGTGAAGTCTGTGTCGTC CTAACTTTTTTCACGCTTTCATTTTGTTTTATCTTAAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig103:563712..566899-

>mRNA_P-littoralis_Contig103.95.2 ID=mRNA_P-littoralis_Contig103.95.2|Name=mRNA_P-littoralis_Contig103.95.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1227bp|location=Sequence derived from alignment at P-littoralis_Contig103:563712..566899- (Pylaiella littoralis U1_48)
ATGTTAACGCAGCTGCTGGATCTGCTGACTTTGTTGGACAAGCTGGAATC
GTTGGACAAGCATCAGAAACCGAAGCACCGCAGCACGCTGGTCCGGCGTC
AAAGGCGAAGCTGGGCGGCTTACAGCAAGCCCCTCCTCGCAGACGGGACC
TTCAGATCGAGTTTCCGCATGGACCACGACGACTTCATGGACCTGGTGGA
TATGCTCCGCCCTGAACTGGAGAGAAACCCTCACATGGGGAGCCTTCGCA
ACGGTGCGGTCCCTGTAGAGTACCAGGTCGGGAATACTCTGCGGTGGTTG
GCTGGTGGTCAAATGCTCGACATCAAGCAAGGCCATGTGATCGCGAAGAG
CACGGCGTACCAGACGGCCGTCCGTGTCATCAAGGCGATCAATGCCTGTG
AGGCGCTGGAATGCCGATGGCCCGAGAAACAGACGGATTACGACAGCATC
GCGGCCGGGTTCAAGAGCCGCAGCACGAACGGTGTGATCGCCAAGTGCGT
GGGAGCCATGGACGGGCTTTTCGTCCGCACCCTGAGGCCGAACTCCCGGG
ACACACATGAGCCCAACTCCTTCTACAGTGGCCACAAGAAGGGTTTCGGG
ATGAACTTCCAGGCTATCTGCGACGCGCAATACAGGATCAGGGCATGGAC
TATGAACTGCCCGGGAAGCCAAAACGACCGCACGGCCTTTAAGGTTTCCG
GCTTCCCCAAGCTCCTCGAAGCTTTGCCGAAAGGTTACTACATCGTGGGG
GACGCGGCGTACCCGGGTTCGGACGTCGTTCTCGTTCCGTACCCGGGAAC
GAAGGTGTCGGATAGCCAGGATGCGTTGAACTACTACCTGTCTCAGTGCA
GGATTGCCATCGAGCAGACGTTCGGGATCCTGGTCAGGAGGTGGGGCATC
CTCTGGAAGCCGTTGGAGCTCCGGCTGGGCAACGTTGCCCCGCTTGTCGA
GAGTCTCGTTCGCCTGCACAACTTCTGCCGAGACCGAAAGGTGGAGGTGC
CAACGGTGGAGGCTGGAGACGTTCGTATCCCCAGCAACATCGGCTTCAAC
CAAAGCGGAGAGTTCAGCAACGACTTTTTCGAAACCGAGCCCTCCTCGTC
TGGTCGCCCGGCGAGAAACCAGGCTCGGGTGTCGGCTCCCCGGGAGGACA
TCCGCCGACAGCTCGAACAACTAGGCATGGGGCGGCCGGCGCACAACATT
TCTAGGAACAAAGACCGCAAGCGGTGA
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