mRNA_P-littoralis_Contig103.37.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: A0A6H5K059_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K059_9PHAE) HSP 1 Score: 485 bits (1248), Expect = 3.650e-160 Identity = 327/574 (56.97%), Postives = 360/574 (62.72%), Query Frame = 3
Query: 558 GAGEDSAESELLQQLEEEYSTLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVYACGRTGANVNKLLAWATERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQV------------------------ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFMLRVVRSRRLSGSASKKSRSAPFAPASTSAADIATAARSSAWDVTRKNSTWQXXXXXXXXXXXAIAAWLLSQEEGTGTVAPQRTTALPPRLDHYDDEDGGVVVGAENANAARTDGDGEDVGVGSDRGAEEERDAREQE-EYDMEALLEAVERESGAEGKPVPEARRICCRFLLDAFRDGQFGTITLDSVPRRK--------KMENSPGQGGWAKGLVVAEREGDTIEARRPGGLGGDVGEAASGXXXXXXXXXXXXAEVCEKTGRQPLGSSPDGELAERLVRDWSSAEAWERPAA--RRT 2174
G E+ +SEL++ LEEEY+TLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSAN DLDKIVGPSKARLIVLNKA + Q L ++ F GK AVYACGRTG NVNKLLAWA ERGARRGEFSTTGA+AMVVGMPNVGKSSLINLLRGKAN G EGAKQV ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVE TAGL LALTRAVPDSA+PPDVLVGFMLRVVRSRR SG A +S +AP AP +TS A AAR A + AIAAWLL A P + DDE V + A R S+ G +E+ D + E E DMEALLEAVERESGAEGKP EARRICCRFLLDAFRDGQFG ITLDSVPRR+ ++ + P GWA+ +VA R G D G A +G + GR+P +S + +LAERLVRDWSSA+AWE A RRT
Sbjct: 49 GMDENPTDSELMR-LEEEYATLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANQDLDKIVGPSKARLIVLNKAR-ARQCLV--AVRDFPALGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANWSGSGGGDG---------EGAKQVCNRPALAAPFSPLRLCRAVPSREVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRSSG-ARDRSVTAPSAPRATSRA----AARRPASQPSPSK---------------AIAAWLLQPAGKAERTTTDANGATGPSISD-DDETSAVGKHGKQRQADRE--------YTSEPGDDEKEDRGDWEREDDMEALLEAVERESGAEGKPALEARRICCRFLLDAFRDGQFGRITLDSVPRRRVLKTNTAAELASGPLPPGWAQ--LVARR-------------GKDRGRAEAGRVV--------------REGRRP-SASQESDLAERLVRDWSSADAWEGADADARRT 550
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: A0A835Z590_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z590_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.460e-46 Identity = 124/330 (37.58%), Postives = 168/330 (50.91%), Query Frame = 3
Query: 591 LQQLEEEYSTLKVNWFPGHMVKATKVIREKLKQ------------------VDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQ------------------------GKTAVYACG------------RTGA---------------NVNKLLAWATERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQ-------------VSAFRIASNP-PLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFMLRVVRSR 1331
+++ E ++ ++VNWFPGHM KA K +R +LKQ VD+V EVRDARIPF+SAN +LD+++G SKARL+VLNK DL+ ++ V +R R + GK +Y G RTG + LL WA E+GA RG+F T GA+AMVVGMPNVGKS+LIN +R G+ ++V RVGA PGV + +FR++ P PLY+VDTPGVMVP + T GL LALT AVPDS + +VLV ++ ++ +R
Sbjct: 1 MEEWERPFAGVRVNWFPGHMAKAQKSMRTRLKQRLPLSPLPPPPLLLLALGVDVVLEVRDARIPFSSANHELDRLIG-SKARLVVLNKEDLAEPSMRSAVTERLRAERKDTGETTAVMDTASEVSRVRRALGKGVLYTNGSESDPPTCLWHPRTGXXXXXXXXGDGPGGGKGIPGLLRWAREKGALRGQFVTLGAMAMVVGMPNVGKSTLINHMRRLCRGGGKGA--------------GRKVVRVGATPGVXXXXXXXXXXXXXXXXIDSFRVSELPQPLYMVDTPGVMVPNIASPTVGLRLALTAAVPDSVVGEEVLVQYLCALLNAR 315
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: A0A1V9YN62_9STRA (Mitochondrial GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN62_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.040e-45 Identity = 97/234 (41.45%), Postives = 140/234 (59.83%), Query Frame = 3
Query: 615 STLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVYACGRTGANVNKLLAWATERGARRGEFS-TTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFML 1313
+T +NWFPGHM A ++ +L +D++ EVRDARIPF+SAN LD I G K RL+VLNK+DL+N ++ RV RF + G +++ G ++ K+L W T G + +F T G V MVVG+PNVGKSSLIN R ++S + K+ A VGA PGVT + F++ +P +Y++DTPGVM+P + GL LALT A+ D + +++ +ML
Sbjct: 13 TTSPINWFPGHMNTAKNSMKAQLGNIDVIIEVRDARIPFSSANPLLDGI-GNHKPRLVVLNKSDLANSNMKARVEARFEDAGMDSLFTSVAKGKHIQKILQWCTTHG--KSQFQQTAGTVVMVVGVPNVGKSSLINSFRSISSS--------------LKLAKGKKKATVGATPGVTVRTDIFKVNESPAIYVMDTPGVMLPNIPSPDVGLKLALTGAIKDEVVGTELIADYML 229
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: A0A1V9Y456_9STRA (Mitochondrial GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y456_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.360e-44 Identity = 98/237 (41.35%), Postives = 142/237 (59.92%), Query Frame = 3
Query: 615 STLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVYACGRTGANVNKLLAWATERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFMLRVV 1322
+T +NWFPGHM A ++ +L +D++ EVRDARIPFTSAN LD I G K RL+VLNK+DL+N ++ RV RF + +++ G ++ K+L W T G + +F ST G V M+VG+PNVGKSS+IN R ++S V K+ A VGA PGVT + F++ +P +Y++DTPGVM+P + GL LALT A+ D + ++L +ML ++
Sbjct: 11 TTSVINWFPGHMNMAKNSMKAQLGNIDVIIEVRDARIPFTSANPLLDGI-GNHKPRLVVLNKSDLANSNMKARVEARFDHENIDSMFTSVIKGKHIQKILQWCTAAG--KSQFQSTAGTVVMIVGIPNVGKSSMINAFRSLSSS--------------LKVSKGKKKAVVGATPGVTVRTDMFKVNESPAIYVMDTPGVMLPNIPTPEVGLKLALTGAIKDDIVGVELLADYMLFIL 230
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: A0A418AEZ7_9STRA (CP-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AEZ7_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.440e-44 Identity = 95/230 (41.30%), Postives = 136/230 (59.13%), Query Frame = 3
Query: 627 VNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVYACGRTGANVNKLLAWATERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFML 1313
+NWFPGHM A ++ +L VD++ EVRDARIP++SAN LD I G K RL+VLNK+DL+N +++RV RF EQ ++ G ++ +L W TE G + +F ST G V MVVG+PNVGKSS+IN R + S + K+ A VG PGVT + ++ P +Y++DTPGVM+P + + GL LALT A+ D + +++ +ML
Sbjct: 40 INWFPGHMNSARNAMKAQLNSVDVIIEVRDARIPWSSANPVLDGI-GSHKPRLVVLNKSDLANSNMKERVEYRFDEQNMDCMFTSVIKGKHIRNILQWCTEHG--KSQFQSTAGTVVMVVGVPNVGKSSMINAFRSISTS--------------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPSPSVGLKLALTGAIKDEIVGEELIADYML 252
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: A0A024UI85_9STRA (Mitochondrial GTPase 1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UI85_9STRA) HSP 1 Score: 171 bits (432), Expect = 5.110e-44 Identity = 95/230 (41.30%), Postives = 136/230 (59.13%), Query Frame = 3
Query: 627 VNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVYACGRTGANVNKLLAWATERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFML 1313
+NWFPGHM A ++ +L VD++ EVRDARIP++SAN LD I G K RL+VLNK+DL+N +++RV RF EQ ++ G ++ +L W TE G + +F ST G V MVVG+PNVGKSS+IN R + S + K+ A VG PGVT + ++ P +Y++DTPGVM+P + + GL LALT A+ D + +++ +ML
Sbjct: 17 INWFPGHMNSARNAMKAQLNSVDVIIEVRDARIPWSSANPVLDGI-GSHKPRLVVLNKSDLANSNMKERVEYRFDEQNMDCMFTSVIKGKHMRNILQWCTEHG--KSQFQSTAGTVVMVVGVPNVGKSSMINAFRSISTS--------------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPSPSVGLKLALTGAIKDEIVGEELIADYML 229
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: A0A6G0WZQ3_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZQ3_9STRA) HSP 1 Score: 171 bits (432), Expect = 5.110e-44 Identity = 95/230 (41.30%), Postives = 134/230 (58.26%), Query Frame = 3
Query: 627 VNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVYACGRTGANVNKLLAWATERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFML 1313
+NWFPGHM A ++ +L VD++ EVRDARIP++SAN LD I G K RL+VLNK DL+N +++RV RF EQ ++ G ++ +L W TE G + +F ST G V MVVG+PNVGKSS+IN R + S + K+ A VG PGVT + ++ P +Y++DTPGVM+P + GL LALT A+ D + +++ +ML
Sbjct: 17 INWFPGHMNSARNAMKAQLNSVDVIIEVRDARIPYSSANPLLDGI-GNHKPRLVVLNKTDLANSNMKERVAYRFHEQNMDCMFTSVIKGKHIRNILDWCTEHG--KSQFKSTAGTVVMVVGIPNVGKSSMINAFRSISTS--------------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPTPDVGLKLALTGAIKDDIVGVELIADYML 229
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: A0A485KRB5_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRB5_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.190e-43 Identity = 95/234 (40.60%), Postives = 136/234 (58.12%), Query Frame = 3
Query: 615 STLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVYACGRTGANVNKLLAWATERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFML 1313
+T +NWFPGHM A ++ +L VD++ EVRDARIP++SAN LD I G K RL+VLNK+DL+N + +RV RF EQ ++ G ++ +L W TE G + +F ST G V M+ G+PNVGKSS+IN RG + S + K+ A VG PGVT + ++ P +Y++DTPGVM+P + GL LALT A+ D + +++ +ML
Sbjct: 20 TTSNINWFPGHMNSARNAMKAQLNSVDVIIEVRDARIPWSSANPLLDGI-GNHKPRLVVLNKSDLANSNMRERVEYRFHEQDMDCMFTSVIKGKHIRNILQWCTEHG--KSQFQSTAGTVVMICGIPNVGKSSMINAFRGISTS--------------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPTPDIGLKLALTGAIKDDIVGVELIADYML 236
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: T0RG29_SAPDV (Mitochondrial GTPase 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RG29_SAPDV) HSP 1 Score: 167 bits (422), Expect = 1.180e-42 Identity = 94/234 (40.17%), Postives = 136/234 (58.12%), Query Frame = 3
Query: 615 STLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVYACGRTGANVNKLLAWATERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFML 1313
+T +NWFPGHM A ++ +L +D++ EVRDARIPF+SAN LD I G K RL+VLNK+DL+N ++ RV RF E ++ G ++ +L W G + +F ST G V M+VG+PNVGKSS+IN R ++S + K+ A VGA PGVT + F++ P +Y++DTPGVM+P + GL LALT A+ D + +++ +ML
Sbjct: 12 TTSAINWFPGHMNSAKNSMKAQLGSIDVIIEVRDARIPFSSANPLLDGI-GNHKPRLVVLNKSDLANSNMKARVEARFEEADMDCLFTSVIKGKHIQHILKWCNTHG--KSQFQSTAGTVVMIVGVPNVGKSSMINAFRSISSS--------------LKLSKGKKKATVGATPGVTVRTDIFKVNEAPAIYVMDTPGVMLPNIPSPDVGLKLALTGAIKDDIVGAELIADYML 228
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Match: F0W0F1_9STRA (Mitochondrial GTPase 1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0F1_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.460e-42 Identity = 101/240 (42.08%), Postives = 136/240 (56.67%), Query Frame = 3
Query: 624 KVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGKTAVY-----ACGRT----GANVNKLLAWATERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANSRGRXXXXXXXXXXXXXVEGAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVEKVTAGLCLALTRAVPDSALPPDVLVGFML 1313
K+NWFPGHM A K ++ +L VD++ EVRDARIPFTSAN LD SK RL+V NK DL+N + + V +F + G+ + AC T G VN +L W E R +F +T G + MV+G+PNVGKSSLIN R ++S + K+ A VG PGVT + ++ + P +Y+VDTPGVM+P VE GL LALT A+ D + +VL +ML
Sbjct: 10 KINWFPGHMAAAKKQMQAQLDSVDVLIEVRDARIPFTSANPILDTAFNHSKPRLVVFNKCDLANSNMRRLVETQFMQDGERTIENSFPRACMFTSVLKGKKVNSILQWCDEN--TRAQFKNTAGTMVMVLGIPNVGKSSLINAFRSLSSSA--------------KLAKGKKRALVGPTPGVTIRKDIIQVNATPAIYVVDTPGVMLPNVENQETGLKLALTGAIRDDIVGKEVLADYML 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig103.37.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig103.37.2 >prot_P-littoralis_Contig103.37.2 ID=prot_P-littoralis_Contig103.37.2|Name=mRNA_P-littoralis_Contig103.37.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=614bp MMIPRRRMPQALTIAAAAAAGRRGTLLTRRCLQQQRQQLQTAAPAPASAAback to top mRNA from alignment at P-littoralis_Contig103:281833..289877- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig103.37.2 ID=mRNA_P-littoralis_Contig103.37.2|Name=mRNA_P-littoralis_Contig103.37.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8045bp|location=Sequence derived from alignment at P-littoralis_Contig103:281833..289877- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig103:281833..289877- >mRNA_P-littoralis_Contig103.37.2 ID=mRNA_P-littoralis_Contig103.37.2|Name=mRNA_P-littoralis_Contig103.37.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1842bp|location=Sequence derived from alignment at P-littoralis_Contig103:281833..289877- (Pylaiella littoralis U1_48)back to top |