mRNA_P-littoralis_Contig1028.10.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1028.10.1
Unique NamemRNA_P-littoralis_Contig1028.10.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 3.340e-194
Identity = 270/324 (83.33%), Postives = 289/324 (89.20%), Query Frame = 1
Query:    1 DLYDAFKKCDGQWIQRRRKIDTFSLFYTLTKCYIQERGVAHIVRMEDEHYSSQAIHSARKKLPIEALKEVNRFLHRGPHEPRVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFNSCHMESTCLVLGVEARLLKYFIGGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTITLRLQKRINEPSYIYTLDTYVTHILGNVKKVSSRVR 972
            ++YDAFKKCDGQW+QRRRK+DT SLFYTLTKC IQERGVAHI+RME+E YSSQAIHSARKKLP  A KEVNRFL RGPHEPRVFA+D S VHVHPSFIGAG  TRTN+KPVP PAKRPLVMLSSM+ VK K C+DFELTKHFNERKAA  MLR VRKGDTL+FDRGYYSK+LLRSVHDS A GVWR K+NA KG + FFNSCH E+TCL+LGV ARLLKYFI GKTYVCLTND SLSRRDIK MYASRWRVEES KRLKSNLKLEKAHAKTPALYIQEVEARVLL TITLRLQK I EPSYIYTLDTYVTHIL NVK+VS+ V+
Sbjct:    8 EIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYVTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRCVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTRPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESLKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSIKEPSYIYTLDTYVTHILNNVKRVSNPVK 331          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 1.390e-187
Identity = 260/324 (80.25%), Postives = 285/324 (87.96%), Query Frame = 1
Query:    1 DLYDAFKKCDGQWIQRRRKIDTFSLFYTLTKCYIQERGVAHIVRMEDEHYSSQAIHSARKKLPIEALKEVNRFLHRGPHEPRVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFNSCHMESTCLVLGVEARLLKYFIGGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTITLRLQKRINEPSYIYTLDTYVTHILGNVKKVSSRVR 972
            ++YDAFKKCDGQW+QRRRK+DT SLFYTLTKC IQERGVAHI+RME+E YSSQAIHSARKKLP  A KEVNRFL RGPHEPRVFA+D S VHVHPSFIGAG  TRTN+KPVP PAKRPLVMLSSM+ VK K C+DFELTKHFNERKAA  MLR VRKGDTL+FDRGYYSK+LLRSVHDS A GVWR K++A KG + FFNSC  E+ CL+LG+EARLLKYFI GKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNL+LEKAHA+TP LYIQEVEARVLL TITLR+Q    E SY+YTLDT+VT+IL NVK+VS   R
Sbjct:    8 EIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSGPSR 331          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 513 bits (1322), Expect = 7.310e-181
Identity = 252/324 (77.78%), Postives = 282/324 (87.04%), Query Frame = 1
Query:    1 DLYDAFKKCDGQWIQRRRKIDTFSLFYTLTKCYIQERGVAHIVRMEDEHYSSQAIHSARKKLPIEALKEVNRFLHRGPHEPRVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFNSCHMESTCLVLGVEARLLKYFIGGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTITLRLQKRINEPSYIYTLDTYVTHILGNVKKVSSRVR 972
            ++YDAFKKCD QW+QRRRK+DT SLFYTLT+C +Q RGV H+++MEDE YSSQA+HSARKKLP+ A KEVNRFLHRGPHEPRVFA+D S VHVHPSFI AG KTRTND+PV  PAKRPLVMLSSM+ VK K CIDFELTKHFNER+AA SMLRSV+KGDTLLFDRGYYSKDLL SVH S A GVWR K++A +G + FFNSC  E+TCL+LGV+ARLLKYFI GKTYVCLT DPSLSR  IKTMYASRWRVEESFKRLKSNL+LEKAHA+TP LYIQEVEARVLL TITLR+Q    E SY+YTLDT+VT+IL NVK+VSS  R
Sbjct:    8 EIYDAFKKCDQQWMQRRRKMDTSSLFYTLTRCCVQGRGVNHVLKMEDEAYSSQAVHSARKKLPMGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINAGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVQKGDTLLFDRGYYSKDLLHSVHGSHAFGVWRLKIDAFRGTRSFFNSCRTEATCLILGVKARLLKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSSPSR 331          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 526 bits (1355), Expect = 1.540e-180
Identity = 257/320 (80.31%), Postives = 284/320 (88.75%), Query Frame = 1
Query:   13 AFKKCDGQWIQRRRKIDTFSLFYTLTKCYIQERGVAHIVRMEDEHYSSQAIHSARKKLPIEALKEVNRFLHRGPHEPRVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFNSCHMESTCLVLGVEARLLKYFIGGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTITLRLQKRINEPSYIYTLDTYVTHILGNVKKVSSRVR 972
            +++KCD QWIQRRRK+DT SLF+TLT+C +Q RGV+H+++MEDE YSSQA+HSARKKLPI A KEVNRFLHRGPHEPRVFA+D S VHVHPSFI +G KTRTND+PV  PAKRPLVMLSSM+ VK K CIDFELTKHFNER+AA SMLRSVRKGDTLLFDRGYYSKDLLRSVHDS A GVWR K++A KG + FFNSC  E+ CL+LG+EARLLKYFI GKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLL TITLR+Q    E SY+YTLDT+VTHIL NVK+VSS  R
Sbjct:   27 SYQKCDQQWIQRRRKMDTSSLFFTLTRCCVQGRGVSHVLKMEDEAYSSQAVHSARKKLPIGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINSGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVRKGDTLLFDRGYYSKDLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVSSPTR 346          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 491 bits (1264), Expect = 3.290e-166
Identity = 245/320 (76.56%), Postives = 270/320 (84.38%), Query Frame = 1
Query:    1 DLYDAFKKCDGQWIQRRRKIDTFSLFYTLTKCYIQERGVAHIVRMEDEHYSSQAIHSARKKLPIEALKEVNRFLHRGPHEPRVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFNSCHMESTCLVLGVEARLLKYFIGGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTITLRLQKRINEPSYIYTLDTYVTHILGNVKKVS 960
            ++YDAFKKCD QW+QRRRK+DT S+FYT+TKC  +ERGV+H+++ME E YSSQA+H ARKKLPI A KEVNRFLHRGPHEPR+FAID S VHVHPSFI AG KTRTNDKPVP PAKRPLVMLSSM+ V+ K CIDFELTKHF+ER+AA+SMLRSVRK DTLLFDRGYYSKDLLRSVHDS A GVWR ++                  CL+LGV  RLLKYFI GKTYVCLTNDPSLSRRDIKTMYA RWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLL TITLR+Q    E SY+YTLDT+VTHIL NVK+VS
Sbjct:    8 EIYDAFKKCDAQWMQRRRKLDTSSVFYTITKCCTRERGVSHVLKMEAEEYSSQAVHLARKKLPIGAFKEVNRFLHRGPHEPRIFAIDGSKVHVHPSFIKAGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKSCIDFELTKHFDERRAAVSMLRSVRKSDTLLFDRGYYSKDLLRSVHDSGAFGVWRLRI----------------MPCLILGVRVRLLKYFIKGKTYVCLTNDPSLSRRDIKTMYAWRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVS 311          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 1.350e-111
Identity = 173/250 (69.20%), Postives = 196/250 (78.40%), Query Frame = 1
Query:  133 MEDEHYSSQAIHSARKKLPIEALKEVNRFLHRGPHEPRVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFNSCHMESTCLVLGVEARLLKYFIGGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTITLRLQK 882
            M +E YSSQAIH ARKKLP+ A KEVNRFLH+GPHEPRVFA+D S VHVHPSFIGAG KTRTNDKPVP PAK PLVMLSSM+ VK K C+DFELTKHFNE  + I                 Y  K  LRS+HDS+A GVWR K+NA KG K F +S   E+TCL+LGV++RL+KY I GKTYVCLTNDP+LSRRDIK +YASRWR E+S  RLKSN++LEKAHA+TP LYIQEVEARVLL TITLRLQ+
Sbjct:    1 MGNEQYSSQAIHLARKKLPVGAFKEVNRFLHQGPHEPRVFAVDGSKVHVHPSFIGAGYKTRTNDKPVPRPAKSPLVMLSSMVDVKTKACVDFELTKHFNEDGSRI-----------------YTQK--LRSIHDSQAFGVWRLKINAFKGTKSFISSWRTETTCLILGVQSRLVKYSINGKTYVCLTNDPTLSRRDIKAIYASRWRGEQSL-RLKSNVRLEKAHARTPDLYIQEVEARVLLDTITLRLQR 230          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: A0A6H5K4T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 3.120e-38
Identity = 90/171 (52.63%), Postives = 101/171 (59.06%), Query Frame = 1
Query:   31 GQWIQRRRKIDTFSLFYTLTKCYIQERGVAHIVRMEDEHYSSQAIHSARKKLPIEALKEVNRFLHRGPHEPRVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRA 543
            G  IQRRRKIDT SLFYTLTK  IQERGV HI+R +DE YSSQA+HSARKKLP  A KE                                        PVP PA RPLVMLSSM+            TK FNERKA +SMLRSV +GDTL+FD+ YYS+ LLR+VHDS+A
Sbjct:  172 GDEIQRRRKIDTSSLFYTLTKRCIQERGVGHILRTDDEQYSSQAVHSARKKLPAGAFKE----------------------------------------PVPRPATRPLVMLSSMVD-----------TKLFNERKADVSMLRSVHQGDTLVFDKEYYSRGLLRNVHDSKA 291          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: A0A2Z2NHE4_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2NHE4_9GAMM)

HSP 1 Score: 102 bits (253), Expect = 2.960e-20
Identity = 90/325 (27.69%), Postives = 152/325 (46.77%), Query Frame = 1
Query:   28 DGQWIQRRRKIDTFSLF--------------YTLTKCYIQER-GVAHIVRMEDEHYSSQAIHSARKKLPIEALKEVN-RFLHRGPHEP-------RVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVG-VWRFKVNALKGIKYFFNSCHMESTCLVLGVEA-------------------RLLKYFIGGKTYVC---LTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTI 864
            D QW +R+R +++  +               Y +T   + E+     I   +    ++ A  +AR KL  E  K +  + L +   +P       R+ A+D S +++    I AG KT +++      A  P   +S +  +K K+ IDF+L  H +ERK AIS L S+ + D +++DRGYYS D+L   HD R +  ++R K  A + ++ F NS  +++   +   ++                   RL+KY  GG +Y+    L +    S   +  +Y SRW VEE +K  K  +K+E  HA++     QE+ A   L T+
Sbjct:  342 DRQWQKRQRVLNSLLIMLFIFRLVFSTNKQGYAITTAELWEQCRTLGIDLPQPTPVAASAFCNARAKLDEEVFKLLQVQILQQAKPDPKKLWQGHRLMAVDGSKLNLPRQLIRAGYKTPSDN------AHYPQGTVSCLYELKTKIPIDFDLASHRDERKMAISHLNSLSETDVVVYDRGYYSYDMLHE-HDKRHIHPIFRLKTTACRVVEAFANSDDIDAVVQIFPSQSKRTSIPAHDPQPDYPALALRLVKYDAGGTSYILGTTLWDQKKYSIEQLSAVYHSRWGVEELYKISKQLMKVEDFHAQSERGVKQELFAHFNLITL 659          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: A0A661PAZ3_9DELT (IS4 family transposase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661PAZ3_9DELT)

HSP 1 Score: 89.0 bits (219), Expect = 7.580e-16
Identity = 84/326 (25.77%), Postives = 146/326 (44.79%), Query Frame = 1
Query:   28 DGQWIQRRRKIDTFSLFYTLTKCYIQERGVAH---IVRM------------EDEHYSSQAIHSARKKLPIEALKEVNRFLHRGPHEP----------RVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFNSCHMESTCLV-------------------LGVEARLLKYFIGGKTYVCLTN--DPSLSRRD-IKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTI 864
            D QW QRRR I+T  L   + +    +    +   IV +            + +  ++ A  +ARKKL     K +N  +    +EP          R+FA+D   +++ P  +        +DK     +  P  ++S +  +K ++  DFEL  H +ER+ A + L+++R GD +++DRGY+S  +L +   +    ++R    A KGI+ F +S   E T  +                     +  RL+KY   G TY   T   D +L ++     +Y +RW +EE +K  K  + ++  HA+T     QE+ A  +L T+
Sbjct:  349 DAQWRQRRRVINTLLLILFIFRLVFSKNQQGYGTTIVELWAQCQQMGVPLPQPKPVAASAFCNARKKLDAAIFKTLNSRI-IATYEPLPESYHWLGRRLFAVDGMKINL-PRPLRHADYAMPSDK-----SHYPQGLVSCLYQLKSQIPYDFELASHMDERRMAQAHLKTLRSGDVVVYDRGYFSYVMLYAHQRAGVDVIFRLSRRAGKGIEVFMDSSETEKTVTIEMPPVRQKTILEKHPDMEFQPLSLRLIKYVFDGTTYTLGTTLLDGNLYQKAAFPDLYHARWGIEELYKVSKKLVGVDDFHAQTERGVKQELFAHFVLLTL 667          
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Match: A0A6L8GGC8_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GGC8_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 6.750e-13
Identity = 78/331 (23.56%), Postives = 141/331 (42.60%), Query Frame = 1
Query:   28 DGQWIQRRRKIDTF---------------SLFYTLTKCYIQERGVAHIVRMEDEHYSSQAIHSARKKLPIEALKEVNR-FLHRGPHEP-----RVFAIDVSTVHVHPSFIGAGCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAISMLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFNSCHMESTCLVLG-------------------VEARLLKYFIGGKTYVC---LTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTITLRLQKRIN 891
            D +W  RRR + TF               S    L + +   R +  +   +D   +  A+  AR K+  E  +E++R  L + P  P     RVF +D + +++    + AG  T  +       A  P  ++S +  ++P++  DF L    +ER+AA   L+++  GD +++DRGY+S ++L +        V+R K +A      F      + T  +                     ++ RL++Y  G   +     L  D      D+  +Y +RWR+EE +K  K  L +E   A++    +QE+ A  ++ T T  +   I+
Sbjct:  321 DREWRVRRRLVGTFLVVLFVLRLVFGTGRSYGEALAEIWESARRMG-VALPQDRPVTPGAMSRARAKVDPEVFRELHREILAQAPDRPLWKGRRVFGVDGAKINLPRPLVEAGYATPGDH------AHYPQGLVSCLYELEPRLPFDFGLHADTSERRAAAEHLKALSAGDVVVYDRGYFSYEMLLAHVVRGQDAVFRLKRDANAETVAFLAGPLDDRTVEIRPDDKARARLKARHPGAAFGPLKLRLVRYAAGDTVFALGTTLAEDDGFGLEDLAAIYRARWRIEEHYKIAKWFLAVESFRAESERGVLQELYANFVMVTATRLMTNEID 644          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1028.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LP60_ECTSI3.340e-19483.33EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
D8LP47_ECTSI1.390e-18780.25EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNB6_ESV1K7.310e-18177.78EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5K772_9PHAE1.540e-18080.31DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA56_9PHAE3.290e-16676.56DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0K9_9PHAE1.350e-11169.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4T1_9PHAE3.120e-3852.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2Z2NHE4_9GAMM2.960e-2027.69Uncharacterized protein n=1 Tax=Granulosicoccus an... [more]
A0A661PAZ3_9DELT7.580e-1625.77IS4 family transposase n=1 Tax=Deltaproteobacteria... [more]
A0A6L8GGC8_9BACT6.750e-1323.56IS4 family transposase n=1 Tax=Acidobacteria bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1028contigP-littoralis_Contig1028:46587..47558 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1046724.KB889834_gene1048
PFAMsDDE_Tnp_1,Nterm_IS4
Model size972
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.56e-17
EggNOG OGsCOG3385@1|root,COG3385@2|Bacteria,1MVRM@1224|Proteobacteria,1RRFT@1236|Gammaproteobacteria,464GA@72275|Alteromonadaceae
DescriptionCOG3385 FOG Transposase and inactivated derivatives
Cds size972
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789365.5218856-CDS-P-littoralis_Contig1028:46586..475581680789365.5218856-CDS-P-littoralis_Contig1028:46586..47558Pylaiella littoralis U1_48CDSP-littoralis_Contig1028 46587..47558 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1028.10.1prot_P-littoralis_Contig1028.10.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1028 46587..47558 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1028.10.1

>prot_P-littoralis_Contig1028.10.1 ID=prot_P-littoralis_Contig1028.10.1|Name=mRNA_P-littoralis_Contig1028.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=324bp
DLYDAFKKCDGQWIQRRRKIDTFSLFYTLTKCYIQERGVAHIVRMEDEHY
SSQAIHSARKKLPIEALKEVNRFLHRGPHEPRVFAIDVSTVHVHPSFIGA
GCKTRTNDKPVPCPAKRPLVMLSSMIHVKPKVCIDFELTKHFNERKAAIS
MLRSVRKGDTLLFDRGYYSKDLLRSVHDSRAVGVWRFKVNALKGIKYFFN
SCHMESTCLVLGVEARLLKYFIGGKTYVCLTNDPSLSRRDIKTMYASRWR
VEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLGTITLRLQKRINEPS
YIYTLDTYVTHILGNVKKVSSRVR
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mRNA from alignment at P-littoralis_Contig1028:46587..47558+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1028.10.1 ID=mRNA_P-littoralis_Contig1028.10.1|Name=mRNA_P-littoralis_Contig1028.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=972bp|location=Sequence derived from alignment at P-littoralis_Contig1028:46587..47558+ (Pylaiella littoralis U1_48)
GACCTGTACGACGCCTTCAAAAAGTGCGACGGACAGTGGATACAGAGACG ACGAAAGATAGACACATTTTCCCTTTTCTACACGCTCACGAAGTGTTATA TTCAAGAGAGAGGTGTTGCTCATATAGTGAGGATGGAGGACGAACACTAC TCGTCACAAGCGATACACTCGGCCAGGAAGAAGCTTCCAATAGAGGCTTT GAAGGAGGTAAATCGGTTCTTACATCGAGGACCACACGAGCCACGTGTAT TCGCCATAGATGTTTCGACAGTGCACGTGCACCCTTCGTTCATCGGCGCT GGCTGTAAGACCCGGACGAATGATAAGCCGGTACCGTGTCCTGCCAAGAG ACCTCTCGTTATGCTTTCGTCGATGATACATGTCAAACCTAAAGTTTGTA TAGACTTCGAGCTCACGAAGCACTTCAATGAACGAAAAGCAGCTATTTCG ATGCTCCGAAGTGTGCGGAAAGGTGACACGCTGTTGTTTGACAGAGGATA TTACTCCAAAGACTTACTGCGCAGTGTCCACGACTCCCGTGCGGTTGGCG TTTGGCGATTTAAGGTAAATGCGCTTAAGGGTATCAAGTATTTCTTCAAC TCGTGTCACATGGAGTCAACATGCCTTGTTCTTGGTGTTGAGGCGCGTCT CTTGAAATACTTCATCGGTGGTAAAACGTACGTTTGTCTGACGAACGACC CGTCGCTATCTCGAAGGGATATCAAGACCATGTACGCGTCGAGGTGGAGG GTGGAAGAATCATTCAAACGATTGAAATCAAACCTCAAGCTCGAGAAAGC CCATGCAAAAACGCCGGCTCTTTACATTCAGGAGGTAGAGGCACGGGTCT TGTTGGGCACAATCACTCTGAGGCTTCAAAAAAGGATAAATGAACCGTCC TATATTTATACCCTTGACACATACGTCACACACATCCTCGGTAACGTAAA AAAAGTTTCGAGTCGTGTGAGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1028:46587..47558+

>mRNA_P-littoralis_Contig1028.10.1 ID=mRNA_P-littoralis_Contig1028.10.1|Name=mRNA_P-littoralis_Contig1028.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=972bp|location=Sequence derived from alignment at P-littoralis_Contig1028:46587..47558+ (Pylaiella littoralis U1_48)
GACCTGTACGACGCCTTCAAAAAGTGCGACGGACAGTGGATACAGAGACG
ACGAAAGATAGACACATTTTCCCTTTTCTACACGCTCACGAAGTGTTATA
TTCAAGAGAGAGGTGTTGCTCATATAGTGAGGATGGAGGACGAACACTAC
TCGTCACAAGCGATACACTCGGCCAGGAAGAAGCTTCCAATAGAGGCTTT
GAAGGAGGTAAATCGGTTCTTACATCGAGGACCACACGAGCCACGTGTAT
TCGCCATAGATGTTTCGACAGTGCACGTGCACCCTTCGTTCATCGGCGCT
GGCTGTAAGACCCGGACGAATGATAAGCCGGTACCGTGTCCTGCCAAGAG
ACCTCTCGTTATGCTTTCGTCGATGATACATGTCAAACCTAAAGTTTGTA
TAGACTTCGAGCTCACGAAGCACTTCAATGAACGAAAAGCAGCTATTTCG
ATGCTCCGAAGTGTGCGGAAAGGTGACACGCTGTTGTTTGACAGAGGATA
TTACTCCAAAGACTTACTGCGCAGTGTCCACGACTCCCGTGCGGTTGGCG
TTTGGCGATTTAAGGTAAATGCGCTTAAGGGTATCAAGTATTTCTTCAAC
TCGTGTCACATGGAGTCAACATGCCTTGTTCTTGGTGTTGAGGCGCGTCT
CTTGAAATACTTCATCGGTGGTAAAACGTACGTTTGTCTGACGAACGACC
CGTCGCTATCTCGAAGGGATATCAAGACCATGTACGCGTCGAGGTGGAGG
GTGGAAGAATCATTCAAACGATTGAAATCAAACCTCAAGCTCGAGAAAGC
CCATGCAAAAACGCCGGCTCTTTACATTCAGGAGGTAGAGGCACGGGTCT
TGTTGGGCACAATCACTCTGAGGCTTCAAAAAAGGATAAATGAACCGTCC
TATATTTATACCCTTGACACATACGTCACACACATCCTCGGTAACGTAAA
AAAAGTTTCGAGTCGTGTGAGA
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