mRNA_P-littoralis_Contig1027.29.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: D7FUA9_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUA9_ECTSI) HSP 1 Score: 620 bits (1598), Expect = 1.790e-208 Identity = 345/488 (70.70%), Postives = 385/488 (78.89%), Query Frame = 3
Query: 468 KNARRWHLSGFLPVGFVPSLAVPLGQRRE--RTCSSSHA-----VRSLSGSKEARSWQGAGGRRTARSGRRQRHFLPW------EGRRRSSDVVVVDGGTGDTEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEEMEDTGEKVLYLCLEKAVDMEALAENSMPGDWEGVLEGEEPLNLYYPDKDKDFDVDAYVKKMGYDRDRDIGKVDKAMFSNLTEEMKQNLETTLPKSAFTDKDDMIPVMAEPKVSPIIDTGVLGLPPPPPLEPEIVTEVAVNVNADGTVDDG----TVVDAEVMREESWAAGFAPDLGGATAGDDSGSGGYSPAGFRAGADFNVPVKEGGGTRELTERQREVSAGLRDTYEKLVKRGMIKDTNSDGTPAKVPDMDEMARSYETEGFMFKDGDFSEEELSKYMDMXXXXXX-------DADLPGGDIDLSDPAVRSAFGLE 1859
++AR+ LSG LP GF+ S A LGQ+R RTC S + +RS G +EA + G RT + GR+QR +PW GGTGDTE+YSWTETDSD+EVRV LPPGTAAKSVQLSVTKT+LTLGLKGREGPVLKGSLKG+V ADESHWTMEEMEDTGEKVLYLCLEK DMEALA NSMP DW GVLEGEEPLN+YYPDKDKDFDV YVK+MGYDR+RDIGKVDKAMFS+LT EMK+NL+TTLPKS+FTDKDDMIPVMA+PKVSP+IDTGVLGLP PPP EPE V + VNVNADGTV +G +DAEV+RE SW AGFAPDLGGA AG YSPAGFRA ADFNVP+K+G ELTERQREV+AGLR TYEKLVK GM+++TN DGTPAK+PDM+EMAR+YETEGFMFK+GDFSEEELSKYMDMXXXXXX D DLPGGDIDL DPA RSAFGL+
Sbjct: 110 QHARKPRLSGDLPAGFIASPAAALGQQRRGTRTCGGSSSGGDSPLRSFGGGREA-GVRRDGWVRTKQPGRQQRQPVPWGXXXXXXXXXXXXXXXXXGGGTGDTEYYSWTETDSDMEVRVPLPPGTAAKSVQLSVTKTSLTLGLKGREGPVLKGSLKGQVHADESHWTMEEMEDTGEKVLYLCLEKVADMEALAANSMPQDWVGVLEGEEPLNVYYPDKDKDFDVGEYVKRMGYDRERDIGKVDKAMFSDLTAEMKENLQTTLPKSSFTDKDDMIPVMADPKVSPVIDTGVLGLPTPPPREPEAVPDETVNVNADGTVSNGGGGAAAIDAEVVREGSWEAGFAPDLGGAAAGGGPDDSAYSPAGFRADADFNVPMKDGE-AGELTERQREVAAGLRRTYEKLVKTGMVQETNPDGTPAKMPDMEEMARAYETEGFMFKEGDFSEEELSKYMDMXXXXXXXXAGLALDDDLPGGDIDLDDPATRSAFGLD 595
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: A0A7R9Y333_9VIRI (Hypothetical protein (Fragment) n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y333_9VIRI) HSP 1 Score: 75.1 bits (183), Expect = 1.580e-10 Identity = 45/122 (36.89%), Postives = 75/122 (61.48%), Query Frame = 3
Query: 705 VVVVDGGTGDTEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEE---MEDTGEKVLYLC-----LEKAVDMEA---LAENSMPGDWEG 1037
V+ G G+ + Y+WT+T S++EVRV +P GT A+++ + ++K AL++ LKG+E P++ G L V+ DES W++E+ + T KV +C LE V+++ + ENS GD +G
Sbjct: 209 VLPSAGNGGEADGYTWTQTLSEVEVRVLVPQGTPARALDVRISKNALSVALKGQE-PIVSGDLSKPVVVDESMWSLEDKTWVVVTFTKVDQMCWWSCVLEGDVEIDTQKVVPENSKLGDLDG 329
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: A0A7S4MF94_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MF94_9EUKA) HSP 1 Score: 69.7 bits (169), Expect = 7.380e-10 Identity = 37/125 (29.60%), Postives = 61/125 (48.80%), Query Frame = 3
Query: 711 VVDGGTGDTEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEEMEDTGEKVLYLCLEKAVDMEALAENSMPGDWEGVLEGEEPLNLYYPDKD 1085
V D G+T + SW +T ++ V LPPG + + + TA+ + +KG+ P+L L V+AD W + E + + LEK + +A G WE V++G+EP Y D++
Sbjct: 21 VNDKNGGETSWGSWEQTKPEVTAFVKLPPGVKPRDCNVKFSSTAIKVSVKGQPDPLLDDMLAAAVVADGCFW------EISEGSMVITLEKELQAKACGREDKTGWWERVVQGDEPKETLYCDRE 139
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: C1MNP5_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MNP5_MICPC) HSP 1 Score: 71.2 bits (173), Expect = 1.460e-9 Identity = 48/149 (32.21%), Postives = 82/149 (55.03%), Query Frame = 3
Query: 720 GGTGDTEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEEMEDTGEKVLYLCLEKAVDME----ALAENSMPGDWEGVLEGEEPLNLYYPDKDKDFDVDAYVKKMGYDR-DRDIGK 1151
G G+ E Y+WT+T ++++VR+ +P GT +K + +T+ L GL+G E P++KG G+V+ D+ WTM + + + L ++K DME + +++P D + V E NL D D + + V+KM YD + +GK
Sbjct: 125 GNGGEAEHYTWTQTLTEVDVRMRVPTGTTSKQIACEMTRNHLAFGLRG-EPPLVKGEWHGEVVPDDCFWTMWD-----KSTVQLTIQKKSDMEWWNVVVKGDAVPIDTKKVQP--ENSNL----SDLDGETRSTVEKMMYDNAQKQMGK 261
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: A0A7S1VPT8_9EUKA (Hypothetical protein n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VPT8_9EUKA) HSP 1 Score: 73.2 bits (178), Expect = 2.260e-9 Identity = 46/150 (30.67%), Postives = 78/150 (52.00%), Query Frame = 3
Query: 675 PWEGRRRSSDVVVVDGGTGDTEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEEMEDTGEKVLYLCLEKAVDMEALAENSMPGDWEGVLEGEEPLNLYYPDKDKDF-DVDAYVKKM 1121
PW+G ++ + GG G + Y+WT+T +++EVR+ +P ++ + +T + + L GR P+L+G+L G V ++ WT+E T +KV L L KA ALA + + W V+E +P D+ D+DA + M
Sbjct: 556 PWDGVLQTPNARG--GGLGPDKLYAWTQTATEVEVRLPVPAEVTKDLIRFKIRRTTVDVRLVGRRQPLLRGTLGGAVKFSDAWWTLESRSRTDDKVFVLTLPKAEA--ALANDPLARFWSCVVET-------HPQIDRSMLDMDALMSAM 694
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: A0A0G4I482_9ALVE (CS domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I482_9ALVE) HSP 1 Score: 72.4 bits (176), Expect = 4.530e-9 Identity = 38/122 (31.15%), Postives = 66/122 (54.10%), Query Frame = 3
Query: 708 VVVDGGTGDTEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEEMEDTGEKVLYLCLEKAVDMEALAENSMPGDWEGVLEGEEPLNLYY 1073
V+V G G TE+YSW ETDS++++RV LP T ++ + K + + LK E P+++G KG + +S W++ + +L L L + +W GV+EG++P+++ Y
Sbjct: 103 VLVARGFGCTEYYSWKETDSEMDIRVKLPQETNVDNIVCDIGKDWIYVRLKTAEEPIIRGQSKGLIRVHDSFWSVSREPE------FLMLNMR-----LQKRDSRVEWGGVIEGDQPMSIAY 213
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: A0A812TJV4_SYMMI (NUDC protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TJV4_SYMMI) HSP 1 Score: 65.5 bits (158), Expect = 1.450e-8 Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 3
Query: 735 TEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEEMEDTGEKVLYLCLEKAVDMEALAENSMPGDWEGVLEGEEPLNL--YYPDKDKDFDVDA----YVKKMGYD-RDRDIGK 1151
T+ Y WT++ S++ V V +PPGT K + + + + +GLKG E P++ G L +V+ D+S WT+E+ + + L+K ME W V+EG+ +N P+ K D+D V+KM YD R + +GK
Sbjct: 2 TDKYVWTQSLSELNVVVPVPPGTKTKQILVEIKNKRIKVGLKG-EPPLVDGELHKRVIVDDSVWTLEDNREVA-----INLQKDNKMEW---------WNCVVEGDPTINTKKVQPENSKLADLDGDTRQTVEKMMYDQRQKAMGK 132
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: A0A4S2N7K8_9PEZI (CS-domain-containing protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N7K8_9PEZI) HSP 1 Score: 65.1 bits (157), Expect = 2.620e-8 Identity = 43/143 (30.07%), Postives = 77/143 (53.85%), Query Frame = 3
Query: 744 YSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEEMEDTGEKVLYLCLEKAVDMEALAENSMPGDWEGVLEGEEPLNL--YYPDKDKDFDVD----AYVKKMGYD-RDRDIGK 1151
YSW +T SD++V + +P GT + + +S+ +T +++GLKG+E P++ GSL ++ D+S W++ + V+ L +EK E W V+ ++ P+ K D+D + V+KM YD R +++GK
Sbjct: 19 YSWKQTLSDVDVSIPVPAGTRGRDLSVSIERTTISVGLKGKE-PIISGSLPHPIVPDDSTWSLSD------NVVELHIEKQNQQEW---------WAHVMTHHPKIDTSKIQPENSKLSDLDGETRSMVEKMMYDQRQKEMGK 145
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: A0A7S0CSR0_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CSR0_MICPS) HSP 1 Score: 65.9 bits (159), Expect = 6.320e-8 Identity = 52/145 (35.86%), Postives = 70/145 (48.28%), Query Frame = 3
Query: 720 GGTGDTEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREG-------PVLKGSLKGKVLADESHWTMEEMEDTGEKVLYLCLEKAVDMEALAENSMPGDWEGVLEGEEPLNLYYPDKDKDFDVDAYVKKMGYDR 1133
G GD E Y+WT+T S++EVRV +P T A+SV V K LT G K E +L G+V D+ WT+E+ + + L L K DME ++ GD E +P N D D D A V+KM YD+
Sbjct: 89 GNGGDAEHYTWTQTLSEVEVRVRVPNDTPARSVVCDVKKKHLTFGYKSVESNATTNVTTLLDADFFGEVKVDDCFWTVED-----KSTVVLTLAKKNDMEWW-RCALLGDPEIDTRKVQPENSQLSDLDGD--TRATVEKMMYDQ 225
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Match: A0A4P2TZ10_9EUGL (NudC2 protein (Fragment) n=2 Tax=Bodo sp. ATCC 50149 TaxID=155205 RepID=A0A4P2TZ10_9EUGL) HSP 1 Score: 63.9 bits (154), Expect = 8.190e-8 Identity = 32/78 (41.03%), Postives = 51/78 (65.38%), Query Frame = 3
Query: 705 VVVVDGGTGDTEFYSWTETDSDIEVRVALPPGTAAKSVQLSVTKTALTLGLKGREGPVLKGSLKGKVLADESHWTMEE 938
+ DG GD EFY++T+T+S++ V V LPPGT +K + + ++ T L +G+KG VL G+L + A ES W++E+
Sbjct: 27 IPCNDGCGGDYEFYTFTQTESEVVVHVPLPPGTLSKQLIVELSTTKLVVGIKGSP-VVLSGTLFKPIKAAESSWSIED 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1027.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1027.29.1 >prot_P-littoralis_Contig1027.29.1 ID=prot_P-littoralis_Contig1027.29.1|Name=mRNA_P-littoralis_Contig1027.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=596bp MTASARAPLWLSPLVLVLAFTTCSSSAATATAATTTSSATNPPDPREASCback to top mRNA from alignment at P-littoralis_Contig1027:60657..70744+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1027.29.1 ID=mRNA_P-littoralis_Contig1027.29.1|Name=mRNA_P-littoralis_Contig1027.29.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10088bp|location=Sequence derived from alignment at P-littoralis_Contig1027:60657..70744+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1027:60657..70744+ >mRNA_P-littoralis_Contig1027.29.1 ID=mRNA_P-littoralis_Contig1027.29.1|Name=mRNA_P-littoralis_Contig1027.29.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1788bp|location=Sequence derived from alignment at P-littoralis_Contig1027:60657..70744+ (Pylaiella littoralis U1_48)back to top |