Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1127 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 633 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789364.2627609-UTR-P-littoralis_Contig1027:41671..41690 | 1680789364.2627609-UTR-P-littoralis_Contig1027:41671..41690 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1027 41672..41690 + |
| 1680789364.2894294-UTR-P-littoralis_Contig1027:42366..42841 | 1680789364.2894294-UTR-P-littoralis_Contig1027:42366..42841 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1027 42367..42841 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789364.2731678-CDS-P-littoralis_Contig1027:41690..42257 | 1680789364.2731678-CDS-P-littoralis_Contig1027:41690..42257 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1027 41691..42257 + |
| 1680789364.2814834-CDS-P-littoralis_Contig1027:42300..42366 | 1680789364.2814834-CDS-P-littoralis_Contig1027:42300..42366 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1027 42301..42366 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1027.12.1 >prot_P-littoralis_Contig1027.12.1 ID=prot_P-littoralis_Contig1027.12.1|Name=mRNA_P-littoralis_Contig1027.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp
MSVGSGGAAAGGRRGDARGGASDAGPAVRGGGHAARGRGGGRGSNGKGKA
ISRSRGPPAGSRSPSVVPPSGSQGSGAGPGLQQFQGSDDVRNAHVSAVTS
SAQSGQGATGGAGGSGHVDEDDESERESAQIAADDTEATALSGGTLGRQQ
RSGQIGRTRATVYRGDPATFDGNMGHQISSVLSMVVNKYEAQACPEMVVD
LGTSPRRILA* back to topmRNA from alignment at P-littoralis_Contig1027:41672..42841+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1027.12.1 ID=mRNA_P-littoralis_Contig1027.12.1|Name=mRNA_P-littoralis_Contig1027.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1170bp|location=Sequence derived from alignment at P-littoralis_Contig1027:41672..42841+ (Pylaiella littoralis U1_48)
GGACATCGCAGCGCTGTCGATGTCGGTTGGCAGTGGTGGTGCTGCGGCCG
GTGGACGTCGCGGTGACGCGCGTGGAGGTGCGAGTGATGCAGGTCCTGCA
GTTCGAGGAGGCGGTCACGCGGCAAGGGGAAGGGGAGGCGGCCGTGGTTC
GAATGGTAAGGGTAAGGCTATTTCACGTTCTCGTGGCCCCCCCGCTGGGT
CTAGGAGCCCCAGCGTTGTGCCTCCCTCGGGTTCGCAAGGATCTGGCGCT
GGTCCCGGCCTACAGCAGTTCCAGGGTTCGGACGATGTGCGGAATGCACA
TGTTTCAGCCGTAACCAGCAGCGCCCAGAGTGGGCAGGGCGCAACAGGCG
GGGCGGGAGGGTCAGGGCATGTAGATGAAGACGACGAATCCGAGCGTGAA
TCCGCCCAGATAGCAGCTGACGACACCGAAGCAACGGCCCTTTCTGGAGG
TACTTTGGGTAGGCAACAGCGGTCAGGACAGATCGGAAGGACGCGTGCAA
CGGTATACCGTGGCGACCCAGCGACCTTTGACGGCAACATGGGGCACCAA
ATTAGCTCTGTCCTCAGCATGGTGGTCAACAAGTACGCTGACCCGAACCG
GGGTGGAGCTGGCAGCGGGGGTGGTTTAGGAGGCGCAAGCGTGTCCGGAG
ATGGTGGTGGACCTGGGGACATCGCCGCGACGAATTCTCGCCTAACAGCA
TTGGAGGGCAGAGTGAAAAGCATCAAGGATCTTCTACTCCAACAGCAACA
GCAGAGGGTCATGAGCCACCCGCCGCCGCAGATCCCAGGCTGACCCCACC
CGTAATGGGGCCCGCCAGGGGCGCCAGGAGGTCCCTACCATCCCTACTCT
TTTGGCGGAATGGCAGCAGCGGCTGGACCCATGGCAGGAGTTCAACAGAA
TGTGCCTGCTCCATCTGCCTTGCCTGGGTCGGGGGCGGGTCAGGCGGCGG
GTGACGGTGACGCGCAGGGCCGACGTGGTGGAAGTCCTGCAGCTGTTTTA
CCTGAATCTGGTATCGTAGAGTCAGCTCCTGCAGGGACAGTTGGTCCTCC
CGGACAGGCTGTTGGCCTGCCACGCACTCCCTCTTCCTCCCGGACGGTTG
CAGCGGGGGAGGCGATGCAGGGGGGGGGCAGTGATTCGGCAAGCGGAGTA
CGACAGGCGCGCAGCGACGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1027:41672..42841+ >mRNA_P-littoralis_Contig1027.12.1 ID=mRNA_P-littoralis_Contig1027.12.1|Name=mRNA_P-littoralis_Contig1027.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig1027:41672..42841+ (Pylaiella littoralis U1_48)
ATGTCGGTTGGCAGTGGTGGTGCTGCGGCCGGTGGACGTCGCGGTGACGC
GCGTGGAGGTGCGAGTGATGCAGGTCCTGCAGTTCGAGGAGGCGGTCACG
CGGCAAGGGGAAGGGGAGGCGGCCGTGGTTCGAATGGTAAGGGTAAGGCT
ATTTCACGTTCTCGTGGCCCCCCCGCTGGGTCTAGGAGCCCCAGCGTTGT
GCCTCCCTCGGGTTCGCAAGGATCTGGCGCTGGTCCCGGCCTACAGCAGT
TCCAGGGTTCGGACGATGTGCGGAATGCACATGTTTCAGCCGTAACCAGC
AGCGCCCAGAGTGGGCAGGGCGCAACAGGCGGGGCGGGAGGGTCAGGGCA
TGTAGATGAAGACGACGAATCCGAGCGTGAATCCGCCCAGATAGCAGCTG
ACGACACCGAAGCAACGGCCCTTTCTGGAGGTACTTTGGGTAGGCAACAG
CGGTCAGGACAGATCGGAAGGACGCGTGCAACGGTATACCGTGGCGACCC
AGCGACCTTTGACGGCAACATGGGGCACCAAATTAGCTCTGTCCTCAGCA
TGGTGGTCAACAAGTACGAGGCGCAAGCGTGTCCGGAGATGGTGGTGGAC
CTGGGGACATCGCCGCGACGAATTCTCGCCTAA back to top
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