mRNA_P-littoralis_Contig1026.4.28 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 1514 bits (3921), Expect = 0.000e+0 Identity = 901/1581 (56.99%), Postives = 1102/1581 (69.70%), Query Frame = 1 Query: 1054 LLPVALALLASPGPRSQAWAQAV-CGTTSAT-PLQIQTAADAVALAAAVNCTDGGTVEAVWSGAIVLDASISIGSGTFLSIAGEDAQAEVRGGSQIRMFSVSSGAGLTLTSLKMSSGSATSGGAVYASMATVTLDGCVFDGNAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGGAENSTVAGASP--SCLLTDAVFTSNNASNDIVVDYDDIFVP----PWTYLYGGGGAAFYRSVVDMTNSVFDGNFAQLSGGAFYGGTGSDVTIDGCSFHNNTSPGHGGAISASRAALGGNTLLTDNSAGTNGAGVFGWDAEGEIEFNDVICTGSVSKAYGGCLYVSGVGVVNEGTVMRDNLAKYAGCIYAGGESDLEVLGGEFTDCRSTGNGAFMFATDGALVTIKEATVTNSVAERRAGVVYCSGDSNDLGGSKVTIEGGTFSDNRALELGGAIVAWGTTSGGXXXXXXXXXXXXXXXXXXXXXXXFIFLEELASLSCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDAIVRNAVIDQTTIENAAVSNNTLVLVDRAVDCSESSICGPGECVDSDLGVLCECLEDSDCLDGGGALSITVKTPPAAVTFSPELVYFELMVSAAADGTAPAIWELTHESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFVATSIGSGNSDSAAGVDVDVESVFYLCKVFEYAMPAD--NGGVTCEQCASIDGAEGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETREGSRDGGASLERGSASTAQRCVNVVVGRSGGRGTGDVVPRGATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRTCCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKRRTGIGSASVILKSAAWSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTHDVACDEGSTAKLEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFSTQQSVDDSRDEENPMALAKNMLTFEQ 5766
LL AL L+++ GP +WAQ V CGT+S T PL+++++ADAV L VNCT GG VE VW+GAI LD +IS+GSGTFLSI GE+ A VRGG QIRMF VS GLTLT LK+S G A GGA+ +SMA VTL+ C FDGN AT G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGL+CGG+EN+T+ AS SC L +F NNAS++ ++DYD++ P P LYGGGGAAFY +VV++T+SVF+ N+AQLSGGA +GGT S + IDG + NN +PG GA++AS A LGGNTL +NSA +G GV GWD+ G +EFNDV+C+ + + GGC Y SG G++N GT+MR N Y ++A S + V GG FT R+ +G F++ATDGA VTIK A V+N+VA+RRAG VYCSG+ D+GG VAWG T+ XXXXXXXXXXXXXXXXXFIFLEE ASLSC GA ++ + AGDQGG IY R+ATWVNSSCDLI N+APQGAAAYLT T NF+NH D E SG SVV+ TETS++A VSFQ+GG LQED+SN AIQLEGGATL+AEDCVFGGW GD+VI N NPA GSLVLDSCDF ++ A MVVTSP SDA +RNA++ TIENAAV NN+L LVDR + C +ICG GECVDS LGVLCECLED +CL GGGALSI +KTPP VT+SP+LVYFEL+VSA A+G+ PAIW LT +++EL+LQV PSSG+LPPG++ TV VTGS ++VGG LVS+FV TS+GSG DS GVDV+V S FYLC+ FEYAMP D N +CEQC +IDGAEG+DC PGATLASLP+R GYWRSSRESL+I C+H ACVGATQ+SS+ DYC EGY+GPYC C+EG+GRG G++CHSCE K+ L+ G+L L+ ++LA+V+L+GGLDA+E R+SL T + GR S SS V S+G ++ G AL G E R GA+ +G S V+V +S + DG G CCG G KIK A+R+P+DKLKILVVVWQIL+VFP IT V+FPPAY+RFL+W+D+++ D+G ++S +C+ P + FY LLLTTL PLG+A+VLVLTY +AKRR G GSA +++ AAWSRH+AAGLLL+FLVF +TST+ FKTFACDD+AVEG+S+LRAD+ + C++D H WY+VYAG+M+ VYP+GIPLLYA+ILW NRESLNP VK VV R G+ D + ++ LEE+L KRR+NPDL+PSMFLWKDFGP+IYYYEV+ECGRRILLTGVL+FI+PNTAAQ A ACMFAF SLLGFELLRPHLD D WLYRLGC+ IFLSNFLALLIKVD+ +GN D G IMI +N+FLI+AV+ SWFS QQ++D+ + A +L FEQ
Sbjct: 4 LLLSALVLVSAGGPIWPSWAQVVACGTSSDTSPLRVESSADAVVLGDVVNCTGGGAVEVVWAGAITLDTAISVGSGTFLSITGENDTAGVRGGGQIRMFGVSPAGGLTLTDLKLSGGRAARGGAIRSSMAAVTLNSCAFDGNIATDGDGGAVWVEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLFCGGSENATLLSASDNASCSLNGVIFAFNNASSETILDYDNMAAPSTQAPLITLYGGGGAAFYHTVVNITDSVFESNYAQLSGGALFGGTDSAMAIDGVTLENNFTPGFAGALAASTATLGGNTLFMNNSAMQSGGGVLGWDSTGTVEFNDVVCSNNTAGGNGGCFYGSGRGILNAGTLMRSNGGIYGASVFAFAGSYISVEGGNFTANRAVSSGGFLYATDGANVTIKGAAVSNNVADRRAGAVYCSGEFLDMGGXXXXXXXXXXXXXXXXXXXXXXVAWGDTT------VVXXXXXXXXXXXXXXXXXFIFLEEEASLSCEGAIVQANTAGDQGGGIYARDATWVNSSCDLICNQAPQGAAAYLTSTVQVANFQNHTVFDTETSGSSVVYVTETSVIASDVSFQSGGSLQEDSSNSAIQLEGGATLIAEDCVFGGWTGDSVIQNANPAEGSLVLDSCDFGDTAAAMVVTSPNSDARIRNALVGDLTIENAAVVNNSLALVDRTLGCDNLNICGSGECVDSALGVLCECLEDDECLGGGGALSIALKTPPPDVTYSPDLVYFELLVSATANGSTPAIWNLTFDADELSLQVLPSSGILPPGEDATVLVTGSPQGQEVGGDLVSQFVVTSVGSGTPDSTTGVDVEVYSAFYLCQAFEYAMPVDDENAAFSCEQCVNIDGAEGLDCELPGATLASLPIREGYWRSSRESLSIHQCVHHTACVGATQISSAQDYCGEGYQGPYCTVCTEGFGRGAGNTCHSCEGTKSRLLIAAGSLFALVILLLVILAVVYLVGGLDAVEGLRRSL------------------STRSVLSGRDS--------------------SSHKVGSSGKSI---GRNALT---------GSEVEERRGEGAASRKGVTSVPISEVDVSEMKSD------------ASSDTDGEDDHAPPMAR-------------------GGDQPGCCGQGEKIKRWAARLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRRAGAGSAGSLMRRAAWSRHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKTGAVVNP-----------RADGSTDRITYKANSEDLEEKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKVDSGVDGNHDVFGAIMIGINMFLIMAVLLASWFSMQQTMDEY------VVAAGTLLAFEQ 1480
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI) HSP 1 Score: 1457 bits (3772), Expect = 0.000e+0 Identity = 898/1622 (55.36%), Postives = 1081/1622 (66.65%), Query Frame = 1 Query: 1006 ASMGTSRGIPRETRCLLLPVALALLASPGPRSQAWAQAVCGTTSATPLQIQTAADAVALAAAVNCTDGGTVEAVWSGAIVLDASISIGSGTFLSIAGEDAQAEVRGGSQIRMFSVSSGAGLTLTSLKMSSGSATSGGAVYASMATVTLDGCVFDGNAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGGAENSTVAGASP-------SCLLTDAVFTSNNASNDIVVDYDDIFVPPWTYLYGGGGAAFYRSVVDMTNSVFDGNFAQLSGGAFYGGTGSDVTIDGCSFHNNTSPGHGGAISASRAALGGNTLLTDNSAGTNGAGVFGWDAEGEIEFNDVICTGSVSKAYGGCLYVSGVGVVNEGTVMRDNLAKYAGCIYAGGESDLEVLGGEFTDCRSTGNGAFMFATDGALVTIKEATVTNSVAERRAGVVYCSGDSNDLGGSKVTIEGGTFSDNRALELGGAIVAWGTTSGGXXXXXXXXXXXXXXXXXXXXXXXFIFLEELASLSCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDAIVRNAVIDQTTIENAAVSNNTLVLVDRAVDCSESSICGPGECVDSDLGVLCECLEDSDCLDGGGALSITVKTPPAAVTFSPELVYFELMVSAAADGTAPAIWELTHESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFVATSIGSGN-----SDSAAGVDVDVESVFYLCKVFEYAMPADNG---GVTCEQCASIDGAEGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETREGSRDGGASLERGSA---------STAQRCVNVVVGRSGGRGTGDVVPRGATARYAD--GTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRTCCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKRRTGIGSASVILKSAAWSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTHDVAC--------DEGSTAKLEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFSTQQSVDDSRDEENPMALAKNMLTFEQK 5769
+S GT R LL +AL A P + CG+TS PL+++T A+A L AAV+CTDGGTVEAVW+G + L A IS+G+GTFLSI GED AEV GG Q +MF VSS GLTLT L++S GSA SGGAVYAS A+V L+ CVFDGN ATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XGLYCGGAENS +C L+ AVF +NNAS++ +VDYD + PW LYGGG AAFYR VVD+T S F GN+AQ+SGGA YGGT S +TIDG SF NT+PG+GG ++AS A LGG+TLL +NSA +NGAGVFGWD +GEIE +D++CT + + +GGCLYV+GVGVVN GTVM N KY GCI+ DS DLGGS+VT+EGG F+DNRALELGGA VAWGT + FIFLEE ASLSC GATI DH+AGDQGG IYGR+ATWVNSSCDLI N APQGAA YLTHT NF+NH DN ASGGSV++AT+T++ A ++FQ+G LQED+SNRAIQLEG TLVAE CVFGGWMGDTVI+N N A GSL LDSCDFSES A+MV SP+SDA++RNA + TI+NAAV + + VLVD A C +S IC GECVDS LGVLCECLED CL+ GGALSI++ P VT+SP+ VYFEL+VSA+ADG P IW L++E++ L L FPSSGVL PG NVTV VTGS L++DVGG LVSRF +S+GSG S S+ GV+++VES FYLC+ FEYA+P D V+CEQC +IDGAEGVDC PGATLASLPVR GYWRS +ES + +C+H E+C GATQVS+++DYC GYEGPYCASC GYG GIG++CH C++ ++ WL+ G+L TL+ + LA+VFL+GGLDA+E R+++ + S S GR S + S + A+A A+ G+A +FAPAF E G+ S G ++ + S+++ V GR+ GR +G ++P T A T G XXXXXXX ++ EKS CCG+G KIK A+R+P+DKLKILVVVWQILTVFP ITG EFPPAY++FL+ +D +NLD+GSI SGTC++PRVSFY RLL+TT+ P+GLA VL+LTY MAK R GIGSASV+ + AAWSRH+AAGLLLTFLVFTSTSTVVFKTFACDD AVEG S+LRAD+ LSCN+DTH WY+VYAGIM+ VYPIGIPLLYA+ILWINR+SLNP V + + + +LEERL+KRRQNPDLVPSMFLWKDFG FELLRPHLD AD WLYRLGCV IFLSNFLALL+KVDAAGE NR LGGI+IA+NV L++AV++++WF+TQQ+VDD+R+ EN A+AK MLT EQK
Sbjct: 4 SSCGTQWRARYRRRFLLSCLALLAPAVVPPAGAQVSTTTCGSTS--PLRVETVAEAGVLGAAVDCTDGGTVEAVWAGTVTLTAPISVGAGTFLSITGEDDSAEVLGGGQTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNNCVFDGNFATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGXGLYCGGAENSXXXXXXXXXXXXXXTCSLSGAVFGANNASSETIVDYD-LIEAPWVTLYGGGAAAFYRGVVDITGSEFLGNYAQVSGGAVYGGTDSVLTIDGSSFEENTTPGYGGGLAASSAVLGGDTLLRNNSATSNGAGVFGWDEDGEIELHDILCTENTATGHGGCLYVAGVGVVNNGTVMITNEGKYGGCIW---------------------------------------------------------DSFDLGGSQVTVEGGRFTDNRALELGGAFVAWGTPT------VLTITGGFFSNNTAKFYGGFIFLEEEASLSCEGATIRDHYAGDQGGGIYGRDATWVNSSCDLIGNAAPQGAAVYLTHTVMAANFDNHEVTDNVASGGSVLYATDTALFATGLNFQSGVGLQEDSSNRAIQLEGETTLVAEGCVFGGWMGDTVIHNANTAEGSLALDSCDFSESAAIMVAGSPHSDALIRNAFVGHHTIDNAAVVDGSPVLVDNAFGC-DSGICAAGECVDSVLGVLCECLEDGVCLNDGGALSISLLVEPPNVTYSPDPVYFELLVSASADGVTPTIWNLSYEADGLELSPFPSSGVLSPGGNVTVMVTGSPLQQDVGGDLVSRFAVSSVGSGGGGTAESSSSTGVELEVESAFYLCQAFEYAVPVDGDDDTAVSCEQCVAIDGAEGVDCELPGATLASLPVREGYWRSGKESSTVLACIHAESCAGATQVSTAEDYCSSGYEGPYCASCQAGYGTGIGNTCHPCDDTRSRWLILAGSLFTLVTLLVLGLAIVFLVGGLDAVEGVRRTVSRSLSVS-------------TKLPLGRRSASV-----------------GSGAAAAAEGAVP---GIAASFAPAF--EEGKGERNSFQGKQQQQQTAVDFFDDGLLRSSSKSPDTAVGGRNTGRFSGVLLPSATTVSGAQRHATLGPSSGXXXXXXXVQADLDRAREGWRKEDEKSAACCGIGEKIKRWAARLPMDKLKILVVVWQILTVFPTITGAEFPPAYAQFLSVIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMAKGRAGIGSASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDQAVEGDSYLRADYSLSCNTDTHTWYKVYAGIMIVVYPIGIPLLYAFILWINRDSLNPRXXXXXXXXXXXXXXXXXXSGWSVASRKAXXXXXXXEHVSKETPEELEERLQKRRQNPDLVPSMFLWKDFG---------------------------------------------FELLRPHLDPADSWLYRLGCVTIFLSNFLALLMKVDAAGESNRSILGGILIAVNVLLVVAVLASTWFATQQTVDDNREGENAFAVAKAMLTHEQK 1478
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE) HSP 1 Score: 1427 bits (3693), Expect = 0.000e+0 Identity = 903/1604 (56.30%), Postives = 1074/1604 (66.96%), Query Frame = 1 Query: 1009 SMGTSRGIPRETRCLLLPVALALLASPGPRSQAWAQAV---CGTTSATPLQIQTAADAVALAAAVNCTDGGTVEAVWSGAIVLDASISIGSGTFLSIAGEDAQAEVRGGSQIRMFSVSSGAGLTLTSLKMSSGSATSGGAVYASMATVTLDGCVFDGNAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGGAENSTVAGASPSCLLTDAVFTSNNASNDIVVDYDDIFVPPWTYLYGGGGAAFYRSVVDMTNSVFDGNFAQLSGGAFYGGTGSDVTIDGCSFHNNTSPGHGGAISASRAALGGNTLLTDNSAGTNGAGVFGWDAEGEIEFNDVICTGSVSKAYGGCLYVSGVGVVNEGTVMRDNLAKYAGCIYAGGESDLEVLGGEFTDCRSTGNGAFMFATDGALVTIKEATVTNSVAERRAGVVYCSGDSNDLGGSKVTIEGGTFSDNRALELGGAIVAWGTTSGGXXXXXXXXXXXXXXXXXXXXXXXFIFLEELASLSCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDAIVRNAVIDQTTIENAAVSNNTLVLVDRAVDCSESSICGPGECVDSDLGVLCECLEDSDCLDGGGALSITVKTPPAAVTFSPELVYFELMVSAAADGTAPAIWELTHESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFVATSIGSGNSDSAA--GVDVDVESVFYLCKVFEYAMPAD----NGGVTCEQCASIDGAEGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETREGSRDGGASLERGSASTAQRCVNVVVGRSGGRGTGDVVPR-----GATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRT-CCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKRRTGIGSASVILKSAAWSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTH-DVACDEGSTAK-LEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFSTQQSVDDSRDEENPMALAKNMLTFEQK 5769
S +R PR LL + LA P AWAQ CG+TS+ L+++T DA L+ AVNCTDGGTVEAVW+GA+ L A IS+G+GTFLSI GED AEV GG Q +MF VSS GLTLT L++S GSA SGGA+ +SMA+VTLD C+F N ATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYC G S+ +PSC L+DA FTSN A+ V + D + W LYGGG AAFY + V++TNS+F+ N+AQ+SGG +GG+GS ++IDGC+ +NN N A +G GVFGW + G +E NDV C+ + ++ GGC Y + V GGEF CRST N V N+VAERRAGVVY SGDSN GG+ T+ XXXXXXXXXXXXXXXXFIFLEE ASLSC GATI DH+AGDQGG IYGR+ATWVNSSCDLI N APQGAA YLTHT NF NH DN ASGGSV++ATET++ A ++FQ+G LQED+SNRAIQLEG TLVA+ CVFGGWMGDTVI N N A GSL LDSCDFSES AVMVV SP+SDA++RNAV+D TIENAA+ N++LVLVD A DC S IC GECVDS LGVLCECL + CL+ GGALSI++ P VT+SP+ VYFEL+VSA+ADG P IW L++E+++L LQV PSSG+LPPG+NVTV++TG+ L++DVGG LV+RFV TS GSG ++S++ GV+++V+S FYLC+ FEYAMP D + C QCA+ DGAEG+DC +PGATLASLPVR GYWRSS+ESL + CL+ +AC G TQ+SSSDDYC + YEGPYCA C+EG G +C+ C K+ L+F G + + F+ LA+VFLIGGLDA+ R S+ S S S + + H+G ++ P XXXXXX S A A++ R V+ G G GD P ATA D GE SRT CCG+G +IK S +P+DKLKILVVVWQILTVFP ITGV+FPP+YSRFL+WVDVVNLDVG + + +CL+P VSFY RLLLTTL P+GL VLVLT+ MAK+R GIGSASV+ + AAWSRH+AAGLLLTFLVFTSTST+ FKTF CDD+AVEG+S+LRAD+ LSC +D H+++ +YAGIM+ VYPIGIPLLYA+ILWINRESLNP V+ + A P+ G DVA + LEERL +RR NPDLVPSMFLWKDFGPD+YYYEVIECGRRILLTGVLIF A TAAQAAMAC+FAF SLLGFELLRPHLD AD WLYRLGCV+IFLSNFLALLIKVDAAGEGNR LGGI+IA+NVFLILAV+STSWF+TQQ VDD+R+EEN +ALAK MLTFEQ+
Sbjct: 3 SFVRTRRNPRRRSLLLSVLVLASAGWP----LAWAQVATTACGSTSS--LRVETVTDAGVLSTAVNCTDGGTVEAVWAGAVTLTAPISVGTGTFLSITGEDGSAEVLGGGQTQMFYVSSSGGLTLTDLRLSGGSAASGGAIESSMASVTLDTCIFSSNVATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCSGGVESS----APSCSLSDATFTSNVATTGAEVSFSDT-IETWADLYGGGAAAFYLAAVEITNSLFELNYAQVSGGGIFGGSGSSMSIDGCTINNNXXXXXXXXXXXXXXXXXXXXXXXXNVADESGGGVFGWYSRGAVEMNDVTCSLNEAEENGGCFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVNGGEFRGCRSTSNXXXXXXXXXXXXXXXXXLVANNVAERRAGVVYSSGDSNGFGGASXXXXXXXXXXXXXXXXXXXXXXXXXTN------VVTXXXXXXXXXXXXXXXXFIFLEEEASLSCEGATIRDHYAGDQGGGIYGRDATWVNSSCDLIGNAAPQGAAVYLTHTVMAANFTNHEVTDNVASGGSVLYATETAVFATGLNFQSGVGLQEDSSNRAIQLEGETTLVADGCVFGGWMGDTVIRNSNTAPGSLTLDSCDFSESAAVMVVGSPHSDALIRNAVVDHLTIENAALVNDSLVLVDNAFDCRTSGICAAGECVDSVLGVLCECLSEDYCLNDGGALSISLLVHPLNVTYSPDPVYFELLVSASADGVTPTIWNLSYEADDLGLQVLPSSGILPPGENVTVAITGNPLQDDVGGVLVTRFVVTSAGSGTAESSSSTGVELEVKSEFYLCQAFEYAMPVDGDDDDNDPVCLQCANFDGAEGLDCESPGATLASLPVREGYWRSSQESLVVHGCLNSDACAGGTQISSSDDYCKDCYEGPYCAVCAEGCCEGSSHTCYRCSGIKSRLLMFAGIVFGVTIVLFLGLAIVFLIGGLDAVNSMRLSMSRKLSVSGKIRGS-----ISRSYHEGSSTSKKPSGRSNFGEDDXXXXXXXXXSAAVGDAAVD------------------------------------EEKTRTAAVI-----GLGPGDYSPERPLSTAATAAAVD---------------RARILEVGARMSDAGGESSRTGCCGLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKQRAGIGSASVLARRAAWSRHMAAGLLLTFLVFTSTSTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNPRVR------------SEATPQPTGGVEMDVALVPANYGDDLEERLEQRRNNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAALGGILIAVNVFLILAVLSTSWFATQQMVDDNRNEENSLALAKTMLTFEQR 1516
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI) HSP 1 Score: 1390 bits (3599), Expect = 0.000e+0 Identity = 882/1650 (53.45%), Postives = 1073/1650 (65.03%), Query Frame = 1 Query: 1000 SSASMG-TSRGIPRET---RCLLLPVALALLASPGPRSQAWAQAVCGTTSATPLQIQTAADAVALAAAVNCTDGGTVEAVWSGAIVLDASISIGSGTFLSIAGEDAQAEVRGGSQIRMFSVSSGAGLTLTSLKMSSGSATSGGAVYASMATVTLDGCVFDGNAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGGAENSTVAG-ASPSCLLTDAVFTSNNASNDIVVDYDDIFVPPWTYLYGGGGAAFYRSVVDMTNSVFDGNFAQLSGGAFYGGTGSDVTIDGCSFHNNTSPGHGGAISASRAALGGNTLLTDNSAGTNGAGVFGWDAEGEIEFNDVICTGSVSKAYGGCLYVSGVGVVNEGTVMRDNLAKYAGCIYAG-GESDLEVLGGEFTDCRSTGNGAFMFATDGALVTIKEATVTNSVAERRAGVVYCSGDSNDLGGS----------------------------KVTIEGGTFSDNRALELGGAIVAWGTTSGGXXXXXXXXXXXXXXXXXXXXXXXFIFLEELASLSCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEAS-GGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDAIVRNAVIDQTTIENAAVSNNTLVLVDRAVDCSESSICGPGECVDSDLGVLCECLEDSDCLDGGGALSITVKTPPAAVTFSPELVYFELMVSAAADGTAPAIWELTHESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFVATSIGSGNS-DSA-AGVDVDVESVFYLCKVFEYAMPADNGGVTCEQCASIDGAEGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXT---ATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETR-EGSRD-GGASLERGSA---STAQRCVNVVVGRSGGRGTGDVVPRGATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRTCCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKRRTGIGSASVILKSAAWSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGL--DGAPAAPERMVGTHDVACDEGSTAKLEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFSTQQSVDDSRDEENPMALAKNMLTFEQKATFLRRIEREEAA 5808
S MG +SRG R R LL + LA P AWAQ S++PL+++T A+A L AAV+CTDGGTVEAVW+G + L A IS+G+GTFLSI GED AEV GG Q RMF VSS GLTLT L++S GSA SGGA+ +SMA+VTLD CVF+GN ATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGG E + A A+ SC L++AVF +NNAS + + Y +V + GGG AAF+ + V++++SVF N+AQLSGGA +GG +++ I+GC F NNT+ G+G A++A A LGG+T LT+NSA NGAGVFGWD G + F+DV+C+ + + GGC Y +G G+VN+G VMR N A G G G D+ V GGEF C + CSGD+ LGGS VTI+GG F +N A GG F+ LEE ASL+C GATIED+ AGD+GG IY + WVNSSCDLI N APQGAA YLT NFE H DN A+ GGSV+ + +S++ + V+FQ+ LQE+T + + A+ GGW+GDTV Y+ NP+ GSLVL+SCDFSES+ M VTSPYSDA +RNA++ TIEN N++LVLVD+A+ C + CGPGECV SDLGVLCECLED CL+ GGA+++TV T+ P+ V F+L VSAAA+GT P IW LT+E+E+L L PSSGVLPPG NVT+SVTG + E+DVGGGL+S+FV ++GSG S DSA AGV ++VE+ FYLC+ FEYAMP VTCEQC +DGAEGVDC PGAT SLPVRAG+WRSS ESL I CLH +ACVGAT++ +SDDYCD GYEGPYCA C+EGYG+G+G++CHSC KA L+ G++ L+A A VFLIGGLDA+ R S+ + T A + ++R + + G + P + F + GE + +GS D A+L A A C VG GG G+ V A A A+ +G + G + G+G KIK ASRVPLDKLKILVVVWQILTVFP ITGV++PP+YSRFL+W+DVVN DVG I S +C +P ++FY RLLLTTLAP+GL VLV+TY MAKR GIGSA V+ + AAWSRH+AAGLLLTFLVFTS+ST+VFKTFACDD+AVEG+SFLRAD+ +SC ++ H WYEVYAG+M+AVYPIGIPLLYA+ILW NR+SLNP TGL DG E G + +L++RL KRRQNPDLVPSMFLWKDFGPD+YYYEVIECGRRILLTG LIFIAP+T AQAA+ACMFAFASLLGFELLRPHLD AD WLYRLGCVVIFLSNFLALLIK D AGEG+R LGGIM+A+N+FLILAV+ ++WF+TQQSVDDSRD ENP+ALAK MLTFEQ A R+ RE A
Sbjct: 26 SREGMGWSSRGTRRRAWYRRRLLSCLVLASTGGP----LAWAQVATTCGSSSPLRVETVAEAGVLGAAVDCTDGGTVEAVWAGTVTLTAPISVGAGTFLSITGEDDSAEVLGGGQTRMFYVSSSGGLTLTDLRLSGGSAASGGAIESSMASVTLDTCVFNGNVATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGGNETTAFANDATSSCSLSEAVFIANNASRETEIQYPSYWVST-DEVDGGGAAAFWYAEVNISDSVFGSNYAQLSGGAVFGGNSTEMAINGCKFENNTTLGYGAAVAACSATLGGSTTLTNNSAEENGAGVFGWDPTGTVVFDDVVCSDNTAGGLGGCYYAAGKGIVNDGAVMRGNSALDDGXXXXGSGGCDITVHGGEFAMCTAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSGDTTGLGGSFVAXXXXXXXXXXXXXXXXXXXXXGYPTVVTIKGGVFRNNSANFYGG----------------------------------FVHLEEEASLTCEGATIEDNNAGDKGGGIYAETSVWVNSSCDLIGNGAPQGAATYLTGVTS-ANFEAHNVTDNVATAGGSVLGVSGSSVVMRGVNFQSADGLQEETCIFGVHTDSTASXXXXXXXXGGWLGDTVFYHANPSAGSLVLNSCDFSESSTTMAVTSPYSDAEIRNALVGDLTIENVETVNDSLVLVDQAMGCGAVNACGPGECVGSDLGVLCECLEDGVCLNNGGAITLTVSGDLPDETYRPDWVKFDLTVSAAANGTTPTIWNLTYEAEKLDLNALPSSGVLPPGGNVTISVTGRSTEQDVGGGLISQFVVATVGSGTSADSATAGVGLEVETAFYLCEAFEYAMPDGEEQVTCEQCVLLDGAEGVDCELPGATQTSLPVRAGHWRSSEESLVIHGCLHSDACVGATEIVTSDDYCDGGYEGPYCAVCAEGYGKGVGNTCHSCTGSKARLLIAAGSVFFLVAXXXXXXAAVFLIGGLDAVASVRGSVARSLRVPGKTTTRAEQPFPPPGPTLPERSASARNISASRQVDDPAVEFDSGEVGGPITGGG--FDAPDDL-------FGYDNGEDKSDGSIDFSDANLVLPLAIAGKDAAFCERFSVG--GGGGSHPPVDADADAAPAEAVAGG-----------------------QSGSR-----GLGEKIKGWASRVPLDKLKILVVVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFSASCALPFLTFYERLLLTTLAPIGLGGVLVVTYWMAKRTAGIGSAGVLARRAAWSRHMAAGLLLTFLVFTSSSTIVFKTFACDDEAVEGESFLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNP-----RAYYSTGLELDG-----EMSEGPRETE------EELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGSRSVLGGIMVAINIFLILAVLFSTWFATQQSVDDSRDNENPVALAKTMLTFEQVAAKSARLAREGRA 1580
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI) HSP 1 Score: 1390 bits (3598), Expect = 0.000e+0 Identity = 874/1582 (55.25%), Postives = 1069/1582 (67.57%), Query Frame = 1 Query: 1045 RCLLLPVALALLASPGPRSQAWAQA-VCGTTSATPLQIQTAADAVALAAAVNCTDGGTVEAVWSGAIVLDASISIGSGTFLSIAGEDAQAEVRGGSQIRMFSVSSGAGLTLTSLKMSSGSATSGGAVYASMATVTLDGCVFDGNAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGGAENSTV--AGASPSCLLTDAVFTSNNASNDIVVDYDDIFVPPWTYLYGGGGAAFYRSVVDMTNSVFDGNFAQLSGGAFYGGTGSDVTIDGCSFHNNTSPGHGGAISASRAALGGNTLLTDNSAGTNGAGVFGWDAEGEIEFND-VICTGSVSKAYGGCLYVSGVGVVNEGTVMRDNLAKYAGCIYAGGESDLEVLGGEFTDCRSTGNGAFMFATDGALVTIKEATVTNSVAERRAGVVYCSGDSNDLGGSKVTIEGGTFSDNRALELGGAIVAWGTTSGGXXXXXXXXXXXXXXXXXXXXXXXFIFLEELASLSCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDAIVRNAVIDQTTIENAAVSNNTLVLVDRAVDCSESSICGPGECVDSDLGVLCECLEDSDCLDGGGALSITVKTPPAAVTFSPELVYFELMVSAAADGTAPAIWELTHESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFVATSIGSGNSDSAAGVDVDVESVFYLCKVFEYAMPADNGGVT--CEQCASIDGAEGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALA--FAPAFAPEPGETREGSRDGGASLERGSASTAQRCVNVVVGRSGGRGTGDVVPRGATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRTCCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKRRTGIGSASVILKSAAWSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTHDVACDEGSTAKLEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFSTQQSVDDSRDEENPMALAKNMLTFEQ 5766
R LLLP AL L ++ GP S+A AQ S+ PL+++T A+A AL AAVNCT GGTVE VW+GA+ L A I++G+GTFLSI GED AEVRGG Q RMF VS+ GLTLT LK+S GSA SGGA+++SMATV L+ CVFDGN ATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGG NST+ AGA+ C L+DA F NNAS++ ++DYD I PW LYGGGG A YR+VVD+T+S F GN+AQLSGGA YGGT + + IDGC F NN +PGHG A++AS A LGG+T+LT+N A NG GVFGWD G IEF+ V+C+ +++ GGC Y +G G +N GTVMR+N+++ GC+YA SD+ V GGEF +C+ST CSG+S D+GG + AWGT + XXXXXXXXXXXXXXXX FIFLEE ASLSC GA ++ + AGDQGG IY R+ATWVNSSCDL+ N APQGAAA+ T+ N ++H SGG VV+ATETS++A VSFQ+G LQED+SN AIQLEGGATL+A++CVFGGWMGD+VI N NPA GSLVLDSCDF ++A MVVTSP SDA +RNA++ TIENAAV N++L LVDRA+ C ICG GECVDS GVLCECLED +CL GGG LSI +KTPP VT+SP+LVYFEL+VS A+G+ P IW LT ++EL LQV PSSG+LPPG++ TV VTGS ++VGG LVS+F+ TS+G+ NS A VDV+V S FYLC+ FEYAMP D T CEQCAS++GAEG+DC PGATLASLPVR GYWRS ESL I C ACVGA Q+SS+ DYC EGY+GPYCA C+EG+GRG G+SCHSCE K+ L+ G+L L+ I+L + +L+GGLDA+E R+SL +T+ G S +L G+ SS G++ + G LA AP F E E +G AS +G S V+V +S D A G G+ CCG G KIK A+R+P+DK+KILVVVWQIL+VFP IT V+FPPAY+RFL+W+++++ D+ ++S +C+ P + FY RLL+TTL PLG+A+VLVLTY MAKRR G GSA + + AAWSRHVAAGLLL+FLVF +TST+ FKTFACDD+AVEG+S+L AD+ + C++D H WY+VYAGIM+ SLNP + A+ +V++ D ER T+ + + LEE+L KRR+NPDLVPSMFLWKDFGPD+YYYEV+ECGRRILLTGVLIFI+PNTAAQ A ACMFAF SLLGFELLRPHLD D WLYRLGC+ IFLSNFLALLIKVD+AG+ NRD G IMI +N+ LI+AV+ SWFS QQ++D+ A +L FEQ
Sbjct: 2 RLLLLP-ALILASAGGPSSRARAQIPTTACDSSPPLRVETVAEAGALGAAVNCTGGGTVEVVWAGAVTLTAPIAVGAGTFLSITGEDDSAEVRGGGQTRMFYVSTLGGLTLTDLKLSGGSAASGGAIHSSMATVALNSCVFDGNFATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLYCGGGVNSTLLSAGATAFCSLSDATFEFNNASSETILDYDAI-TEPWVNLYGGGGVAVYRAVVDITDSEFQGNYAQLSGGALYGGTDAAIAIDGCWFENNFTPGHGAAVAASSATLGGSTVLTNNLATQNGGGVFGWDTAGRIEFSSGVVCSTNLADEKGGCFYTTGGGTINNGTVMRENISRSGGCLYALNGSDVTVHGGEFRECQSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSGNSLDMGGXXXXXXXXXXXXXXXXXXXXXVAAWGTPT------VVXXXXXXXXXXXXXXXXGFIFLEEEASLSCEGAFVQGNTAGDQGGGIYARDATWVNSSCDLLHNEAPQGAAAFFTNIVEAANLQSHTVTHTVESGGGVVYATETSVIASGVSFQSGVILQEDSSNSAIQLEGGATLIAKECVFGGWMGDSVIQNANPAEGSLVLDSCDFGNTSAGMVVTSPNSDARIRNALLSDLTIENAAVVNSSLALVDRALGCDNLGICGSGECVDSAFGVLCECLEDGECLGGGGTLSIVLKTPPPDVTYSPDLVYFELLVSTTANGSTPIIWNLTFGADELFLQVLPSSGMLPPGEDATVLVTGSPQGQEVGGDLVSQFIVTSVGTSNS--ATDVDVEVYSAFYLCQAFEYAMPVDGEDTTFSCEQCASVNGAEGLDCEIPGATLASLPVREGYWRSGGESLTIHQCSPSSACVGAAQISSAQDYCGEGYQGPYCAVCAEGFGRGAGNSCHSCEGTKSRLLIAAGSLFALVILLLIILTVAYLVGGLDAVEGLRRSL--------------------STSFVGDRS-VLSGR---------------DSSSHKTGSSSKSIGRDRLADSVAPTFKVT-SEVEERGAEGAAS-RKGVTSVPVSEVDVSEMKSDASSDTDTEDDNAPPMVRGG-----------------------------GQPG--CCGHGEKIKRWAARLPMDKIKILVVVWQILSVFPSITAVDFPPAYARFLSWINMLSFDLEHVLSASCVFPVMDFYQRLLVTTLVPLGVAMVLVLTYWMAKRRAGSGSAGALGRRAAWSRHVAAGLLLSFLVFIATSTMAFKTFACDDEAVEGESYLGADYGIQCHTDKHTWYKVYAGIMIL-------------------SLNPPAE-ASTLVDSSAD------ERK--TNKAYKPKFMSEDLEEKLEKRRRNPDLVPSMFLWKDFGPDMYYYEVVECGRRILLTGVLIFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCMCIFLSNFLALLIKVDSAGDSNRDVFGWIMIVINLLLIMAVLLASWFSMQQTMDEYA------VAAGTLLAFEQ 1470
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI) HSP 1 Score: 1267 bits (3278), Expect = 0.000e+0 Identity = 712/1272 (55.97%), Postives = 849/1272 (66.75%), Query Frame = 1 Query: 2089 NDVICTGSVSKAYGGCLYVSGVGVVNEGTVMRDNLAKYAGCIYAGGESDLEVLGGEFTDCRSTGNGAFMFATDGALVTIKEATVTNSVAERRAGVVYCSGDSNDLGGSK----------------------------VTIEGGTFSDNRALELGGAIVAWGTTSGGXXXXXXXXXXXXXXXXXXXXXXXFIFLEELASLSCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDAIVRNAVIDQTTIENAAVSNNTLVLVDRAVDCSESSICGPGECVDSDLGVLCECLEDSDCLDGGGALSITVKTPPAAVTFSPELVYFELMVSAAADGTAPAIWELTHESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFVATSIGSGNSDSAAG---VDVDVESVFYLCKVFEYAMPADN-----------GGVTCEQCASIDGAEGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETREGSRDGGASLER--GSASTAQRCVNVVVGRSGGRGTGDVVPRGATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRT-CCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKRRTGIGSASVILKSAAWSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTHDVACDEGSTAKLEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFSTQQSVDDSRDEENPMALAKNMLTFEQK 5769
NDV C+ + ++ GGC Y +G+G+VN +S++ V GGEF CRSTGNG FM+ +DG VTI V N+VAERRAGVVY SGDSNDLGG+ VT+ GG F +N A GG FIFLEE ASLSC GATI DH AGDQGG IYGR+A WVNSSCDLI N APQGAA YLTHT NF+NH DN ASGGSV +AT+T++ A ++FQ+G LQED+SNRAIQLEG TLVAE CVFGGWMGDTVI N N A GSL LDSCDFSES AVMVVTSP SD I+RNA++D TIENAA+ N++LVLVD A DC IC GECVDS LGVLCECL + CLDGGGALS+ V T P VT+SP+ VYFEL+VSA+ADG PAIW L+HE+E+L LQV PSSG+LPPG+NVTV+VTGS L++DVGG LV+RFV TS GSG ++S V+++VES FYLC+ FEYAMP D+ V C QCA++DGAEG+DC +PGATLAS+PVR GYWRSS+ESL + CLH +AC GATQ+SSSDDYC + YEGPYCA C+EG G +CH C K+ L+F G + + F+ +A+VFLIGGLDA++ R S+ S S + T+ + XXXXXXXX S++V +A E A+A G G S ER +A+TA + +G AR +D GE +RT CCG+G +IK S +P+DKLKILVVVWQILTVFP ITGV+FPP+YSRFL+W+DVVNLDVG + + +CL+P VSFY RLLLTTL P+GL VLVLT+ MAK R GIGSASV+ + AAWSRH+AAGLLLTFLVFTS ST+ FKTF CDD+AVEG+S+LRAD+ LSC +D H++Y +YAGIM+ VYPIGIPLLYA+ILWINR+SLNP V+ + TG A E+ V +G L+ERL +RR+NPDLVPSMFLWKDFGPD+YYYEVIECGRRILLTGVLIF A TAAQAAMAC+FAF SLLGFELLRPHLD AD+WLYRLGCV+IFLSNFLALLIKVDAAGEGNR LGGI+IA+NVFLILAV+STSWF+TQQ VDD+R+EEN +ALAK MLTFEQ+
Sbjct: 2 NDVTCSLNEAEENGGCFYSAGIGIVNXXXXXXXXXXXXXXXXXXSADSNVNVNGGEFRGCRSTGNGGFMYVSDGGTVTITGGLVANNVAERRAGVVYSSGDSNDLGGAXXXXXXXXXXXXXXXXXXXXXXXXXXTNVVTVTGGYFVNNTAKFYGG----------------------------------FIFLEEEASLSCEGATIRDHSAGDQGGGIYGRDAAWVNSSCDLIGNAAPQGAAVYLTHTVMAANFDNHEVTDNVASGGSVFYATDTALFATGLNFQSGVGLQEDSSNRAIQLEGETTLVAEGCVFGGWMGDTVIRNANTAPGSLTLDSCDFSESAAVMVVTSPQSDTIIRNAIVDHLTIENAALVNDSLVLVDNAFDCGTPGICAAGECVDSVLGVLCECLSEGYCLDGGGALSVDVLTAPPNVTYSPDPVYFELLVSASADGVTPAIWNLSHEAEDLGLQVLPSSGILPPGENVTVAVTGSPLQDDVGGVLVTRFVVTSAGSGTAESXXXXXXVELEVESAFYLCQAFEYAMPVDSEXXXXXXXPDAASVVCLQCANLDGAEGLDCESPGATLASMPVREGYWRSSQESLVVHGCLHSDACAGATQISSSDDYCKDCYEGPYCAVCAEGCCEGSSHTCHRCSGIKSRLLMFAGIVFGVTIVLFLGVAIVFLIGGLDAVDSVRLSMSRKLSISGKPRGGISRSHHEGTSSISSKRPSGRSNFGGDXXXXXXXXRGRSAAVGNAAVDEEKTRTAAVA--------------GLGPGDYSPERRLSAAATAAAIDRARILEAG-------------ARMSDA----------------------------GGESARTGCCGLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKERAGIGSASVLARKAAWSRHMAAGLLLTFLVFTSASTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNPRVRSEAIPQPTG------AVEKKVSLVPANYGDG----LQERLDQRRRNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAALGGILIAVNVFLILAVLSTSWFATQQMVDDNRNEENSLALAKTMLTFEQR 1174
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE) HSP 1 Score: 1164 bits (3011), Expect = 0.000e+0 Identity = 703/1393 (50.47%), Postives = 844/1393 (60.59%), Query Frame = 1 Query: 2053 VFGWDAEGEIEFNDVICTGSVSKAYGGCLYVSGVGVVNEGTVMRDNLAKYAGCIYAGGESDLEVLGGEFTDCRSTGNGAFMFATDGALVTIKEATVTNSVAERRAGVVYCSGDSNDLGGSKVTIEGGTFSDNRALELGGAIVAWGTTSGGXXXXXXXXXXXXXXXXXXXXXXXFIFLEELASLSCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDAIVRNAVIDQTTIENAAVSNNTLVLVDRAVDCSESSICGPGECVDSDLGVLCECLEDSDCLDGGGALSITVKTPPAAVTFSPELVYFELMVSAAADGTAPAIWELTHESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFVATSIGSGN-----SDSAAGVDVDVESVFYLCKVFEYAMPADNG---GVTCEQCASIDGAEGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETREGSRDGGASLERGSASTAQRCVNVVVGRSGGRGTGDVVPRGATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRTCCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKRRTGIGSASVILKSAAWSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTHDVACDEG-----------STAKLEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFSTQQSVDDSRDEENPMALAKNMLTFEQKATFLRRIEREEAARR----------------GGGSXXXXXXXXXXXXXXXNDGGERAATAAATEGTDGVWSASSSSLGAGLLRSAGSSFRGWGFWRGSGATGAVSGASNGIIKGRKQKVSAAIVEELWREDRAVG 6126
VFGWD +GEIE +D++CT + + +GGCLYV+GVGVVN GTVM N KY GCIYA G SDLEVLGGEFT C +T NGAFMFA+DGALV +K+ATV N VA RR V+YCSGDS DLGGS+VT+EGGTFSDNRALELGGA VAWGT + LT T GG +T+N CDFSES AVMVV SP+SDA++RNAV+D TIENAA+ N++LVLVD A DC S IC GECVDS LGVLCEC + CL+ GGALSI++ P VT+SP+ VYFEL+VSA+ADG PAIW L+HE+E+L LQV PSSG+L PG+NVTV+VTGS L +DVGG LVSRF +S+GS S S+ G++++VES FYLC+ FEYA+P D V+CEQC IDGAEGVDC PGATLASLPVR GYWRS +ES + +C+H E+C GAT VS+SDDYC GYEGPYCASC GYG GIG++CHSC+ + WL+F G+L TL+ + LA+VFLIGGLDA+E R+++ + S T GR S + S + A+A A+ G A +F PAF GE R S+ TA N R +G ++ EKS CCG+G KIK +R+P+DKLKILVVVWQILTVFP ITG EFPPAY++FL+ +D +NLD+GSI SGTC++PRVSFY RLL+TT+ P+GLA VL+LTY MAK R GIGSASV+ + AAWSRH+AAGLLLTFLVFTSTSTVVFKTFACDD+AVEG+S+LRAD+ LSCN+ TH WY+VYAG+M+ VYPIGIPLLYA+ILWINRESLNP +P + PA G + G + +LEERL+KRRQNPDLVPSMFLWKDF PD+YYYEVIECGRRILLTG LIFIAP+TAAQAAMACMFAFASLLGFELLRPHLD AD WLYRLGCV IFLSNFLALL KVDAAGE NR LGGI+IA+NV L++AV++++WF+TQQ+VDD+R+ EN A+AK MLT EQ +R+EREE+A+R G G XXXXXXXXXXXXXX GG GV ++SLG+G R G+G+ G+ SG N + GR VSAA VEELW ED+A+
Sbjct: 2 VFGWDEDGEIELHDILCTENTAIGHGGCLYVAGVGVVNNGTVMVKNEGKYGGCIYAYGGSDLEVLGGEFTACLATSNGAFMFASDGALVNVKDATVRNGVATRRGAVIYCSGDSFDLGGSQVTVEGGTFSDNRALELGGAFVAWGTPT-------------------------------------------------------------------------------VLTIT--------------------------------------GGFFSNNTAN-----------------------------------------CDFSESAAVMVVGSPHSDALIRNAVVDHLTIENAALVNDSLVLVDNAFDCGTSGICAAGECVDSVLGVLCECPSEDYCLNDGGALSISLLVHPLNVTYSPDPVYFELLVSASADGVTPAIWNLSHEAEDLGLQVLPSSGILSPGENVTVAVTGSPLRQDVGGDLVSRFAVSSVGSSGGGTAESSSSTGLELEVESAFYLCQAFEYAVPVDGDDDTAVSCEQCVVIDGAEGVDCELPGATLASLPVREGYWRSGKESATVLACIHAESCAGATHVSTSDDYCSSGYEGPYCASCQAGYGTGIGNTCHSCDGTRFRWLIFAGSLFTLVTLLVLGLAVVFLIGGLDAVEGVRRTVSRSLS-------------VTTRLPLGRRSASV-----------------GSGAAAAAEGAVP---GFAHSFTPAFEEGRGE-RHSSQGKQXXXXXXXXXTAMDSFN---------------------RPGEG-------------------------WRKEDEKSAACCGIGEKIKRWTARLPMDKLKILVVVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMAKSRAGIGSASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDEAVEGESYLRADYSLSCNTATHTWYKVYAGVMIVVYPIGIPLLYAFILWINRESLNPRPRPKATDDDVDETTVPAQDADASGWSVASRKAGGXXXGEYVSKETPEELEERLQKRRQNPDLVPSMFLWKDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLSNFLALLTKVDAAGESNRSILGGILIAVNVLLVVAVLASTWFATQQTVDDNREGENAFAVAKVMLTHEQVVAQSKRLEREESAQRDTGRREARVGGNSGGIGAGHLXXXXXXXXXXXXXXRVGGGSGEIGXXXXXXXGV----AASLGSGFRRP------------GAGSQGS-SGTRN-LFSGRTGSVSAARVEELWEEDKAMA 1138
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: A0A6H5JZ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ37_9PHAE) HSP 1 Score: 481 bits (1239), Expect = 1.350e-142 Identity = 429/1318 (32.55%), Postives = 538/1318 (40.82%), Query Frame = 1 Query: 2053 VFGWDAEGEIEFNDVICTGSVSKAYGGCLYVSGVGVVNEGTVMRDNLAKYAGCIYAGGESDLEVLGGEFTDCRSTGNGAFMFATDGALVTIKEATVTNSVAERRAGVVYCSGDSNDLGGSKVTIEGGTFSDNRALELG-----------------GAIVAWGTTSG--GXXXXXXXXXXXXXXXXXXXXXXXFIFLEELASLSCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGV-NFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDAIVRNAVIDQTTIENAAVSNNTLVLVDRAVDCSESSICGPGECVDSDLGVLCECLEDSDCLDGGGALSITVKTPPAAVTFSPELVYFELMVSAAADGTAPAIWELTHESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFVATSIGSGNSDSAAGVDVDVESVFYLCKVFEYAMPADNGGVTCEQCASIDGAEGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETREGSRDGGASLERGSASTAQRCVNVVVGRSGGRGT--GDVVPRGATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRTCCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKRRTGIGSASVILKSAAWSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTHDVACDEGSTAKLEERLRKRRQNPDLVPSMFLWKDF------GPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRL----------------------------------------------------GCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFSTQQSVDDSRDEENPMALAKNMLTFEQ 5766
V GWD+ G +EFNDV+ + + + GGC Y SG G++N G + V GG+ T R+ G+G F++A GA VTIK ++N+VA+RRAG V+ SG+ D+GGSKVTIEGGT R L LG A + W + FIFL+E ASLSC ED SS DLI N+APQGAAAYLT + V NF+NH D EASG VV+ TETS++A VSFQ+G LQED+SN AIQLEGGATL+AE+CVFGGW GD+VI N N GSLVLDSCDFS++TA MVVT ++ TIE+AAV NN+LVLVDRA+ C ICG GEC+DS LGVLCECLED D ESL I C+H ACVGATQ+ S+ DYC +GY+GP CA P T + H GR S+V + G + C G + + TR D +S + +S G+S GR T V P A +G G +G SR GV + VP+ + V+ S + D + + G VP+ + R L P+ A+VLVLTY + KRR GSA + + AAWSRHVAAGLL +F VF +TS + FKTFA DD+AVEG+S LRAD+ + C++D H WY+VYA ESLNP VK V+ DG+ A + + LEE+L KRR+NPDL+PS+ F P+IYYYEV+ECGRRILLTGVLIFI+PNTAAQ + ACMFAF SLL FELL PHL+ D WLYRL GC+ IFLSNFLALLIKVD+ +GN D +G IMI +NVFLI+AV+ SWFS QQ++D+ + A +L FEQ
Sbjct: 38 VLGWDSTGAVEFNDVVGSNNTAGGNGGCFYGSGRGILNAGXXXXXXXXXXXXXXXX--XXXISVEGGKLTTHRAVGSGGFLYAAAGANVTIKGGAMSNNVADRRAGAVHFSGEFLDMGGSKVTIEGGTQMVIR-LALGLLHLCCKSVQHFQWMWCVATLLWFHDAQLMTKYTLRPHIYFTRVLPLPARFFGGFIFLDEEASLSC-----ED-------------------SSYDLICNQAPQGAAAYLTSSTVEVANFQNHTVFDTEASGSYVVYVTETSVIASGVSFQSGVSLQEDSSNSAIQLEGGATLIAEECVFGGWTGDSVIQNANQTEGSLVLDSCDFSDTTATMVVT-----------LVGDLTIEDAAVVNNSLVLVDRALRCESLGICGSGECMDSALGVLCECLEDDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------GESLIIHQCVHHAACVGATQIPSAQDYCGQGYQGP-CA---------------------------------------------------------------------PATPATLGGYQVKIAHCGRI-----------------VVRSRDSAVDNPGGGVSCRGSQCRGLRRSLS-----TRSVLFDCDSSSHKAGSS----------GKSPGRDTLADSVAPALKVASEVEGRGG-------------------------EGAVSRK--GV--------TTVPISE-------------------VDVSEMKSEASSDTDSEDDHAPPMARGVG-VPQ--HHCRGFSPCLRPV--AMVLVLTYSITKRRARAGSAGSLRRRAAWSRHVAAGLLRSFSVFIATSNMAFKTFAYDDEAVEGESCLRADYSIQCHTDKHGWYKVYA-----------------------ESLNPRVK-TGAVINPRADGSTAR---------ITYKPKYSEDLEEKLEKRRRNPDLIPSITFPPQFLPMFAPDPEIYYYEVVECGRRILLTGVLIFISPNTAAQVSAACMFAFGSLLCFELLGPHLEPVDSWLYRLVSCGNEGRLRNSTVAILGASKSQAFYTRSSDLFKRCPLLVLACFELVPTHLQGCLCIFLSNFLALLIKVDSRADGNHDVVGAIMIGINVFLIMAVLLASWFSMQQTMDEY------VVAAGTLLAFEQ 949
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 402 bits (1033), Expect = 2.600e-110 Identity = 348/1138 (30.58%), Postives = 504/1138 (44.29%), Query Frame = 1 Query: 2638 GDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDA-IVRNAVIDQTTIENAA---------VSNNTLVLVDRAVDCSESSICGPGE-CVDSDLGVLCECLE-----DSDCLDGG-GALSIT-VKTPPAAVTFSPELVYFELMVSAAADGTAPA------------------IWELT-----HESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFV-----------ATSIGSGNSDSAAGVDVDVESVFYLCKVFEYAMPADNGG-----VTCEQCA-SIDGA-EGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETREGSRDGGASLERGSASTAQRCVNVVVGRSGGRGTGDVVPRGATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRTCCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKR-----------RTGIGSAS----------------------VILKSAA-----------------------------WSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTHDVACDEGSTAKLEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFS 5688
G GGAIY + + C L N A G A Y A V ADN + GS + ++++ V D E+ A+Q + +T +AED F G+ G+ V+Y G L LD CDFS S++ ++V + DA ++RNAV+ T EN A S + + ++ D S S CG G C++ DLGV CE + + C G AL++T ++ + TF P L+ EL +S AA A W ++ E E+ VFPS+G+L PG++V + + + D G + V A+ + S + G DV V YLC + + +G V C+ C SIDGA EGVDC++ GAT LP++AGYWR+ SL I+ CL+ EAC G T V+ +YC+EGY GP CA C G+G+G+ CH C G G + F A +L+GG A+ +++ST +A + R S LL K V+S G A G L P+ T+ +G A+ +V VG S G+GTG T D +D +R LLA+ +PL KLKI++VVWQI + F IT FPP Y +FL+ + + + D+G I+S CL + FY +LL+ T+ PL L +T+ + R T G AS V S A ++RH L++ +LV+T STVVF+TFAC+ G+ +LRADF + C++ H Y+ YAG+MM +YP+GIP ++ Y L R +NP A +R G H V E ++ R ++ + P+ FLW + P YYYEV EC RR+LLTG+L+F+ P+T Q A +C+FA SL+ FELLRPH+++ D LYR GC+VI +NFLAL+IK AA + + G +AL + I+ +S WF+
Sbjct: 649 GVDGGAIYAVDGANLEWECHLRENSALIGPAIYARDYAV-VALSGVEVADNFVTRGSAIFVVNSALITSQVVVS---DTSENPDLSAVQTDRLSTYIAEDTSFVGFAGEVVVYG----EGELYLDECDFSGSSSAVLVYAELEDATVIRNAVLGVKTYENIADDASDMLQLPSADRFINLNLTCDSSAVSPCGEGSWCLEGDLGVYCERYQLRSTLEEVCASGDVDALTLTLIEDTESQRTFYPSLIERELQLSLAASNATDAGDDDIATSSRSCAGANRVAWSVSGLWPPSEEEQDDWTVFPSTGLLLPGESVRLQLV--SQPNDAFNGFANITVRANDITALSTTASILASDAEPQSEGGDVTVSVEHYLCDEGSFWNSSVSGADLDPTVACKLCTESIDGAVEGVDCTSAGATTKELPIKAGYWRAKVTSLTIRECLNEEACKGGTTVAEVQEYCNEGYVGPQCAVCGTGFGKGVAYECHPCTAGFQGGMYFLLAXXXXXXXXXXXXXXXYLVGGKSAVSS---TVVST--------------KESALRIQHRGSVLLTRK------------------VSSFGRARSDFGD--LTEGPSVESSAVSTKAWGTEGKAAP-----------TDVSVGGSRGQGTG------GTGNDRD----------------------------DDAPPTRVA-------NLLAA-LPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKETNMSPNATTADGGASGSGGRELEEGRVQGACSGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEA-------------LKKRRGGRHVV----------ERKMTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADK-DSSGSAAYSVALVIVNIMFFLSI-WFN 1661
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 7.500e-107 Identity = 338/1151 (29.37%), Postives = 510/1151 (44.31%), Query Frame = 1 Query: 2602 SCTGATIEDHFAGDQGGAIYGREATWVNSSCDLISNRAPQGAAAYLTHTAGGVNFENHLAADNEASGGSVVHATETSMMAKAVSFQAGGDLQEDTSNRAIQLEGGATLVAEDCVFGGWMGDTVIYNLNPANGSLVLDSCDFSESTAVMVVTSPYSDA-IVRNAVIDQTTIENAAVSNNTLVLVDRA-------VDCSESSI---CGPGE-CVDSDLGVLCECLE-----DSDCLDGG-GALSIT-VKTPPAAVTFSPELVYFELMVSAA------AD------------GTAPAIWELT-----HESEELALQVFPSSGVLPPGDNVTVSVTGSALEEDVGGGLVSRFV-----------ATSIGSGNSDSAAGVDVDVESVFYLCKVFEYAMPADNGG-----VTCEQCA-SIDGA-EGVDCSNPGATLASLPVRAGYWRSSRESLAIKSCLHPEACVGATQVSSSDDYCDEGYEGPYCASCSEGYGRGIGSSCHSCEEGKAGWLLFTGALLTLIAAAFILLALVFLIGGLDAIEDARQSLLSTFSESAPETASAAXXXXTATTHKGRASRLLPGKYXXXXXXXXXXXXXSSSSVASAGTALECPGGVALAFAPAFAPEPGETREGSRDGGASLERGSASTAQRCVNVVVGRSGGRGTGDVVPRGATARYADGTSGXXXXXXXXXXXXXXXXXXXXXXXXEDGEKSRTCCGVGHKIKLLASRVPLDKLKILVVVWQILTVFPGITGVEFPPAYSRFLAWVDVVNLDVGSIVSGTCLVPRVSFYHRLLLTTLAPLGLALVLVLTYQMAKR---------------------RTG--------------------IGSASVILKSAA---------------------WSRHVAAGLLLTFLVFTSTSTVVFKTFACDDDAVEGQSFLRADFRLSCNSDTHVWYEVYAGIMMAVYPIGIPLLYAYILWINRESLNPSVKPANVVVETGLDGAPAAPERMVGTHDVACDEGSTAKLEERLRKRRQNPDLVPSMFLWKDFGPDIYYYEVIECGRRILLTGVLIFIAPNTAAQAAMACMFAFASLLGFELLRPHLDNADVWLYRLGCVVIFLSNFLALLIKVDAAGEGNRDGLGGIMIALNVFLILAVVSTSWFS 5688
+C+GAT+ H G GGAIY + + +C + N A G A Y A V +DN + GS + ++ + V D E++ A+Q + +T A+D F G+ G+ V+Y+ G L LD CDFS S++ ++V + DA ++RNAV+ E A + ++ + A + C+ SS CG G C++ DLGV CE + + C G AL++T ++ + TF P L+ EL +S A AD G + W ++ E E+ VFPS+G+L PG++V + + + D GL + V A+ + S + G DV V +Y C + + +G V C C SIDGA EGVDC++ GAT LP++AGYWR++ SL I+ C + AC G T V+ +YC+EGY GP CA C G+G+G+ CHSC G G + F A+ ++L+GG A+ S + ESA H+G S LL + SV +A P+ G +G GG+++ S T + V RG G+ R + D + ++ L + +PL KLKI++ IT FPP Y +FL+ + + + D+G I+S CL + FY +LL+ T+ PL L +T+ + R R G IG A+ +S ++RH L++ +LV+T STVVF+TF+C+D G+S+LRADFR+ C++ H Y+ YAG+M+ +YP+GIP ++ Y L R +NP A +R G H VA E+++ R Q+ + P+ FLW + P YYYEV EC RR+LLTG+L+F+ P+T Q A +C+FA SL+ FELLRPH++N D LYR GC+VI +NFLAL+IK AA + + G +AL + I+ +S WF+
Sbjct: 417 TCSGATVLQH-EGIDGGAIYAIDGANLEWACHIRENSALIGPAIYARDNAV-VALRGVEVSDNFVTRGSAIFLVNSTFITSQVVVN---DTSENSDLSAVQTDALSTYTAQDTCFVGFAGEVVVYS----EGELYLDECDFSGSSSAVLVYAELEDATVIRNAVLGANNYETIAEDASEMLQLPSADSFINLNLTCNSSSAVSPCGVGSWCLEGDLGVYCEHYQLRSTLEEVCASGDVDALTLTLIEDTESQPTFYPSLLERELQLSFAPSNATNADDDDIATSSRSCVGASRVAWSVSGLWPSSEEEQDDWTVFPSTGLLLPGESVRLRLV--SQPNDAFNGLANITVRANDITALSTTASILASNTEPQSEGGDVTVGVEYYFCDEGNFWNSSVSGADLDPTVACTLCTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQEYCNEGYVGPQCAVCETGFGKGMADECHSCTAGFKGGMYFLLAVXXXXXXXXXXXXXIYLVGGKSAVS----STVVNTKESA-----------LRIQHRG--SVLL------------------TRSVDNA------------------RPDFGGLSDGPPIGGSAVSTNSPGTEHKAAPPEVSAGQSRGQGN--SRAGNDKDDDASP--------------------------------------RRVANLLTALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLMVTIGPLLPLCFLGITFFVGSRPAKKTNMSPNTTAGGGATSGSRVGEVEEGRVQGASSRSMASVMAIGGATARAQSVRNLLRAKSGQQKNPEQERLWGLFARHTTIMLIVLYLVYTQISTVVFQTFSCEDLPEIGKSYLRADFRIECDTQRHTLYKAYAGVMICIYPLGIPAIFFYFLVRQRSRINPPTDEA-------------LKKRRGGRH-VA---------EQKMTVRDQDQSIAPTSFLWSAYFPTCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAIVSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADK-DSSGSAAYSVALVIVNIMFFLSI-WFN 1428 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1026.4.28 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1026.4.28 >prot_P-littoralis_Contig1026.4.28 ID=prot_P-littoralis_Contig1026.4.28|Name=mRNA_P-littoralis_Contig1026.4.28|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1715bp MGTSRGIPRETRCLLLPVALALLASPGPRSQAWAQAVCGTTSATPLQIQTback to top mRNA from alignment at P-littoralis_Contig1026:30379..51929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1026.4.28 ID=mRNA_P-littoralis_Contig1026.4.28|Name=mRNA_P-littoralis_Contig1026.4.28|organism=Pylaiella littoralis U1_48|type=mRNA|length=21551bp|location=Sequence derived from alignment at P-littoralis_Contig1026:30379..51929+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1026:30379..51929+ >mRNA_P-littoralis_Contig1026.4.28 ID=mRNA_P-littoralis_Contig1026.4.28|Name=mRNA_P-littoralis_Contig1026.4.28|organism=Pylaiella littoralis U1_48|type=CDS|length=5145bp|location=Sequence derived from alignment at P-littoralis_Contig1026:30379..51929+ (Pylaiella littoralis U1_48)back to top |