mRNA_P-littoralis_Contig1025.34.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE) HSP 1 Score: 731 bits (1886), Expect = 1.390e-251 Identity = 370/506 (73.12%), Postives = 420/506 (83.00%), Query Frame = 1 Query: 1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEP--ARR-------ARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGLPPLQRSTRSPRPQRQDFPRGGRG 1488 PP+PLRLLLTGTAGTGKTVVIREMVR VG+QRFILMAPTGNAACAIGGMT+H GFRIPV + RSSDPS+M+E A+ DLQ+RM VDFILVDEFSMVGQDMLG+MSARGKQAV GR DG D DVFGGLSIILVGD AQLPPVGA +W PS+ GLS+QG QAWL+MNNAVE TQVMRQ GPEQAAFRDTLLRIAEG QT DW +L++RF + VG+ ERE+F++AVHIFPTN ADDWNW+RLN L TPIARI+A HT+ GY AV+++RFRGLQ H FLA+GARVF+NNNVWVSAGLANGA+GEVVHMQWAEG PP LPEVVWVRVENYRGPQ FE PL R W GE+DLT++ PI P+D+MDD+P RR ARC R QLPL LAFGITI+KSQGNTLLRC+LDIG ++SDGQSFT FSR RTLENMLLEPF+ ERFL+IG S SFQ RL+AIDH+R +E+ TRR+HGLPP+ R+ R PR +R R GRG Sbjct: 358 PPSPLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVENRTRRQHGLPPIVRTARPPRTRR----RAGRG 859
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE) HSP 1 Score: 633 bits (1633), Expect = 1.150e-220 Identity = 321/457 (70.24%), Postives = 370/457 (80.96%), Query Frame = 1 Query: 148 TMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEP--ARR-------ARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGLPPLQRSTRSPRPQRQDFPRGGRG 1488 T+H GFRIPV + RSSDPS+M+E A+ DLQ+RM VDFILVDEFSMVGQD+LG+MSARGKQAV GR DG D DVFGGLSIILVGD AQLPPVGA+ +W PS+ GLS+QG QAWL+MNNAVE TQVMRQ GPEQAAFRDTLLRIAEG QT DW +L++RF + VG+ ERE+F++AVHIFPTN ADDWNW+RLN L TPIARI+A HT+ GY AV+++RFRGLQ H FLA+GARVF++N VWVSAGLANGA+GEVVHMQWAEG PP LPEVVWVRVENYRGPQ FE PL R W GE+DLT++ PI P+D+MDD+P RR ARC R QLPL LAFGITI+KS GNTLLRC LDIG ++SDGQSFT FSR RTLENMLLEPF+ ERFL+IG S SFQ RL+AIDH+R +ED TRR+HGLPP+ R+ R PR +R R GRG Sbjct: 3 TIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVEDRTRRQHGLPPIVRTARPPRTRR----RAGRG 455
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE) HSP 1 Score: 569 bits (1467), Expect = 3.650e-182 Identity = 293/483 (60.66%), Postives = 348/483 (72.05%), Query Frame = 1 Query: 49 KTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVTNRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEPAR-------------RARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEP-FARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGLPPLQRSTRSPRP 1455 + + +REMVR++G+QRF+L+APTGNAACAIGG T+H+G R+ V NR D ++SE A DLQ+++ GVDF+LVDEFSM+GQDMLG+MS R KQAV GR D HL +FGGL II+VGD QL V MW P S+ LS QG AWL MN AV+ TQVMRQ G QAAFR+TLLRIAEG T +DW L+ RFT+ V + ERESF+NAVHIFPTN ADDWNW+RL L TPIARIDA H++ GY + +DRFRGL+ FLAVGARVFINNNVW S GLANGA GEVVHMQWA G+ PPSLPEVVWVRVENYRG Q F PL R WGG VDL +++PI+PID DD P + RC RTQLPL LAFGITIHKSQG TLLRC+LDIG ++KSDGQ+FT SR R L+NMLL+P F ER RIGTS +F RL A+ +RE+ + TR ++ L + R RP Sbjct: 1185 QALAVREMVRQLGRQRFLLLAPTGNAACAIGGETIHTGLRVGVQNRPRGDLGEISESARRDLQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRIGTSRTFGARLDALHRVRELANQTRVQNELDAIDIPPRRHRP 1667
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE) HSP 1 Score: 531 bits (1369), Expect = 1.340e-169 Identity = 264/340 (77.65%), Postives = 294/340 (86.47%), Query Frame = 1 Query: 1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQ 1017 PP+PLRLLLTGTAGTGKTVVIREMVR VG+QRFILMAPTGNAACAIGGMT+H GFRIPV + RSSDPS+M+E A+ DLQ+RM VDFILVDEFSMVGQDMLG+MSARGKQAV GR DG D DVFGGLSIILVGD AQLPPVGA +W PS+ GLS+QG QAWL+MNNAVE TQVMRQ GPEQAAFRDTLLRIAEG QT DW +L++RF + VG+ ERE+F++AVHIFPTN ADDWNW+RLN L TPIARI+A HT+ GY AV+++RFRGLQ H FLA+GARVF+NNNVWVSAGLANGA+GEVVHMQWAEG PP LPEVVWVRVENYRGPQ Sbjct: 1099 PPSPLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQ 1438
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE) HSP 1 Score: 424 bits (1090), Expect = 2.180e-139 Identity = 208/303 (68.65%), Postives = 244/303 (80.53%), Query Frame = 1 Query: 607 QTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEP--ARR-------ARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRHGLPPLQRSTRSPRPQRQDFPRGGRG 1488 QT DW +L++RF + VG+ ERE+F++AVHIFPTN ADDWNW+RLN L TPIARI+A HT+ GY AV+++RFRGLQ H FLA+GARVF+NNN WVSAGLANGA+GEVVHMQWAEG PP LPEVVWVRVENYRGPQ FE PL R W GE+DLT++ PI P+D+MDD+P RR ARC R QLPL LAFGITI+KSQGNTLLRC+LDIG ++SDGQSFT FSR RTLENMLLEPF+ ERFL+IG S SFQ RL+AIDH+R +ED TRR+HGLPP+ R+ R PR +R R GRG Sbjct: 2 QTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVEDRTRRQHGLPPIVRTARPPRTRR----RAGRG 300
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE) HSP 1 Score: 327 bits (838), Expect = 2.340e-105 Identity = 165/224 (73.66%), Postives = 187/224 (83.48%), Query Frame = 1 Query: 70 MVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQ 738 MV+ VG+QRFILMAPTGNAACAIGGMT+H GFRIPV + RSSDPS+M+E A+ DLQ+RM VDFILVDEFSMVGQDMLG+MSARGKQAV GR DG D DVFGGLSIILVGD A LPPVGA +W PS+ GLS+QG QAWL+MNNAVE TQVMRQ GPEQAAFRDTLLRIAEG QT DW +L++RF + VG+ ERE+F++AVHIFPTN ADDWNW+ Sbjct: 1 MVKLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWR 224
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE) HSP 1 Score: 336 bits (861), Expect = 2.310e-102 Identity = 173/231 (74.89%), Postives = 197/231 (85.28%), Query Frame = 1 Query: 1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGPEQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENA 690 PP+PLRLLLTGTAGTGKTVVIREMVR VG+QRFILMAPTGNAACAIGGMT+H GFRIPV + RSSDPS+M+E A+ DLQ+RM VDFILVDEFSMVGQD+LG++SARGKQAV GR DG D DVFGGLSIILVGD AQLPPVGA +W PS+ GLS+QG QAWL+MNNAVE T+VMRQ GPEQAAFRDTLLRIAEG QT DW +L++RF + VG+ ERE+F++A Sbjct: 476 PPSPLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLISARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE) HSP 1 Score: 283 bits (723), Expect = 2.950e-80 Identity = 147/187 (78.61%), Postives = 160/187 (85.56%), Query Frame = 1 Query: 1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVT-NRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGP 558 PP+PLRLLLTGTAGTGKTVVIREMVR VG+QRFILMAPTGNAACAIGGMT+H GFRIPV + RSSDPS+M+E A+ DLQ+RM VDFILVDEFSMVGQDMLG+MSARGKQAV GR DG D DVFGGLSIILVGD AQLPPVGA +W PS+ GLS+QG QAWL+MNNAVE TQVMRQ GP Sbjct: 787 PPSPLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGP 973
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: UPI00077A905F (ATP-dependent DNA helicase PIF1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A905F) HSP 1 Score: 272 bits (696), Expect = 3.590e-80 Identity = 169/470 (35.96%), Postives = 263/470 (55.96%), Query Frame = 1 Query: 1 PPAPLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVTNRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLG--PEQAAFRDTLLRIAEGTQTRSDW-ILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEPARRARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGT 1401 P PL L++ G AGTGK+ +I +R + + + A TG AA I G T+HS ++PV R + + ++ A++ LQ + + +I+++E+SM+GQ MLG + R +QA G D +VFG LS+IL GD AQLPPV + +++ P+S+ + QGH A+L N ++ + R G PEQ+ FR+ L R+ G T DW +LL ++ T+ VE F++A ++ +N++ ++N ++L+ L+ PIA ++AHH+ + + D GL+P FLA GA V + N+W + GL NGA G V+ +A PP LPE V V+ +NYRGP E ++ +PI PI + R QLPL LA+ ITIHKSQG TL + ++DIG +++ G S+ SR RTL + ++EP ER I S S + R+ + + E+ + T Sbjct: 88 PKDPLFLIVNGVAGTGKSYLINA-IRNLLRTSCAVTATTGKAAYNINGCTIHSLLKLPVGTRGNKE---LTARALVRLQNNLKRIAYIIIEEYSMLGQTMLGWIDRRCRQAT------GISD---EVFGHLSLILFGDPAQLPPVADRPLYHSKPTSS-IGEQGHLAYLMFTNVIKLSVNQRVQGSNPEQSQFRELLTRLHTGDCTEQDWKLLLTRQPTNAPNLVE---FQDATRLYFSNEEVANYNVEKLSALQHPIACVNAHHSSDLAKKASPDEMAGLEPCIFLAKGAHVMLTLNLWTAVGLCNGATGTVIDFIYANNQQPPDLPEAVIVKFDNYRGPSITES------------ISSCVPICPITVSSQ--TLDGLHERQQLPLKLAWAITIHKSQGLTLPKAWIDIGQTERTAGISYVAISRVRTLSSCIIEPMTFERLKSIKKSASLKFRIEEEERLNELAEQT 526
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A) HSP 1 Score: 266 bits (680), Expect = 5.290e-76 Identity = 170/470 (36.17%), Postives = 255/470 (54.26%), Query Frame = 1 Query: 10 PLRLLLTGTAGTGKTVVIREMVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVTNRRSSDPSQMSEGAIMDLQKRMTGVDFILVDEFSMVGQDMLGVMSARGKQAVRGRIRDGDHDGHLDVFGGLSIILVGDCAQLPPVGAKSMWNPVPSSTGLSVQGHQAWLAMNNAVEFTQVMRQLGP--EQAAFRDTLLRIAEGTQTRSDWILLQQRFTSQVGSVERESFENAVHIFPTNDKADDWNWQRLNLLRTPIARIDAHHTVQGYRAVTADRFRGLQPHRFLAVGARVFINNNVWVSAGLANGAIGEVVHMQWAEGSAPPSLPEVVWVRVENYRGPQDFEGPLTRQWGGGEVDLTDIIPITPIDLMDDEPARRARCHRTQLPLALAFGITIHKSQGNTLLRCYLDIGPRKKSDGQSFTTFSRYRTLENMLLEPFARERFLRIGTSNSFQGRLHAIDHIREIEDGTRRRH 1413 PL L++ G AGTGK+ +I + R + + + + A TG A+ I G+T+HS ++PV R + D +S + LQ+++ +++IL+DE+SM+GQ G + R KQA G HD V GG+S+IL+GD QLPPV K +++ PS+ + QG+ + + V+ T R G EQ FR+ LLR+ +G T DW LL R S + ++ F +A +F +ND+ +N +L L P A I+A H+ +++ +D GLQP +A GA+V + N+W S GL NGA G VV + +A PP LP V VR +NY+GP E DL +PI PI + A R QLPL LA+ +TIHKSQG TL + ++DIG +K+ G S+ SR +TL ++++EP ER I +S + RL + + + TR H Sbjct: 274 PLCLIIIGVAGTGKSYLINAL-RSLLQNKCSVTATTGKASFNIQGITVHSLLKLPVGPRGAKD---LSGQTLSRLQEKLNEIEYILIDEYSMLGQTTFGWIDKRCKQAT------GFHD---KVHGGMSMILIGDPGQLPPVVDKPLYHAQPSNP-IGEQGYLTYQMFDKVVKLTANQRVQGSSSEQQQFRELLLRLRKGESTVQDWKLLLTRQPSCIENISE--FNDATRLFYSNDEVSAYNLDQLTKLMEPCANINARHSSVTAKSLPSDEMSGLQPSISIAKGAKVMLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGPSLRE------------DLPMCVPICPITV--SAQALEGVQERQQLPLKLAYALTIHKSQGLTLSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAIKSSTTLHYRLEEESRLDYLAESTRASH 713 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1025.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1025.34.1 >prot_P-littoralis_Contig1025.34.1 ID=prot_P-littoralis_Contig1025.34.1|Name=mRNA_P-littoralis_Contig1025.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=514bp MVRRVGKQRFILMAPTGNAACAIGGMTMHSGFRIPVTNRRSSDPSQMSEGback to top mRNA from alignment at P-littoralis_Contig1025:75830..77878+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1025.34.1 ID=mRNA_P-littoralis_Contig1025.34.1|Name=mRNA_P-littoralis_Contig1025.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2049bp|location=Sequence derived from alignment at P-littoralis_Contig1025:75830..77878+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1025:75830..77878+ >mRNA_P-littoralis_Contig1025.34.1 ID=mRNA_P-littoralis_Contig1025.34.1|Name=mRNA_P-littoralis_Contig1025.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1542bp|location=Sequence derived from alignment at P-littoralis_Contig1025:75830..77878+ (Pylaiella littoralis U1_48)back to top |