mRNA_P-littoralis_Contig1023.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 434 bits (1117), Expect = 8.660e-149 Identity = 195/246 (79.27%), Postives = 217/246 (88.21%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
+VLGVLQVLGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW W+RLPEG+ L++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y G + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+AWFTACIIHNM
Sbjct: 210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNM 455
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 423 bits (1088), Expect = 5.410e-146 Identity = 189/246 (76.83%), Postives = 215/246 (87.40%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
+VLGVLQVLGRGNCFADVA SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V Y +G PGAV S DCTH++W C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ HTGGWLIVDGGYHRVP LICP+K YAS QQEWSKRFES+RKDIEC FGRLKGRFRLFKTGILF +REKIDNAWFTACIIHNM
Sbjct: 112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNM 357
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 391 bits (1005), Expect = 4.190e-136 Identity = 182/246 (73.98%), Postives = 201/246 (81.71%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
QVLGVLQ LGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW W+RLPEG+DL++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV YKYE+Y G + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKD+EC FGRLKGRFRLFKTGILF R KID+A FTACIIH M
Sbjct: 5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTM 234
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 1.020e-135 Identity = 173/223 (77.58%), Postives = 195/223 (87.44%), Query Frame = 1
Query: 70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
MS++TAE+SFHRFC CFA GLW W+RLPEG+DL++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y G + HTGGWLI +GGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+AWFTACIIHNM
Sbjct: 1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNM 223
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 311 bits (798), Expect = 1.760e-104 Identity = 133/223 (59.64%), Postives = 174/223 (78.03%), Query Frame = 1
Query: 70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
MS +TAEKSFH FC+ F+ LW WV+LP GD+LK+VE ++ + G+PGA+ S DCTH W SE ++ GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY DG+ + + G WL+VDGGY ++PLLI P K +A+VE+ +WS+R ES+RKDIEC +GR+KGRFRLFK GIL+ +R+ IDN WFTACI+HNM
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNM 223
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE) HSP 1 Score: 286 bits (731), Expect = 1.230e-93 Identity = 127/185 (68.65%), Postives = 150/185 (81.08%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPY 555
VLGVLQVLGRGNCFADVA SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V Y + PG V S DCTH++ C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWA YK+ L+ L+G ++ HTGGWLIVDGGYHRV + Y
Sbjct: 100 SVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRVSSVWVSY 284
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 274 bits (701), Expect = 5.450e-87 Identity = 125/210 (59.52%), Postives = 155/210 (73.81%), Query Frame = 1
Query: 109 CDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
C+ F+ GLW WV+LP GD+LK+VE IY + G+PGA GS DCTH W C +SE N H GKEGYTS+V E CDH+GRIIA+TK PGAENDKTV+ RD S+ RI+ EEPW SY +T W+IVDGGY ++PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF ILF++R+K DNA FTACI+HNM
Sbjct: 90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNM 286
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE) HSP 1 Score: 251 bits (640), Expect = 6.420e-80 Identity = 129/272 (47.43%), Postives = 163/272 (59.93%), Query Frame = 1
Query: 7 LGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHR----------------------------VPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
+G L+VL G CF DVA+FSLMS++TAE SFH FC+ F+ GLW WV+LP GD+ K+ N H GKEGYTS+V E CDH+GRIIA+TK YPGAENDKTV+ RD S+ RI+ EEPW SY +T W+IVDGGY + +PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF +LF++R+K+DNAWFTACI+HNM
Sbjct: 1 MGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKK--------------------------------NTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNM 227
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 253 bits (647), Expect = 1.710e-79 Identity = 118/246 (47.97%), Postives = 162/246 (65.85%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
QVL LQ+L RGN FAD+ + S +S T +FHRFC FA L+ ++V LP G+DL++V Y+++GFPGAVGS D TH+ W C Y++ I+ GKEG +V F+ DH+GR++A T+G+ GA NDKT+++ D +V RI+ + + KY+LY DG G +L+VD GYH+ LI P K +SKR ES RKD+EC+FG LKGRFR+ K I F+ +E IDN +FT CI+HNM
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 328
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 252 bits (643), Expect = 8.060e-78 Identity = 117/246 (47.56%), Postives = 162/246 (65.85%), Query Frame = 1
Query: 1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
+VL LQ+L RGN FAD+ + S +S T +FHRFC FA L+ ++V LP G+DL++V Y+++GFPGAVGS D TH+ W C Y++ I+ GKEG +V F+ DH+GR++A T+G+ GA NDKT+++ D +V RI+ + + KY+LY DG G +L+VD GYH+ LI P K +SKR ES RKD+EC+FG LKGRFR+ K I F+ +E IDN +FT CI+HNM
Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 419 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1023.9.1 >prot_P-littoralis_Contig1023.9.1 ID=prot_P-littoralis_Contig1023.9.1|Name=mRNA_P-littoralis_Contig1023.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=246bp QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRback to top mRNA from alignment at P-littoralis_Contig1023:59662..61214+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1023.9.1 ID=mRNA_P-littoralis_Contig1023.9.1|Name=mRNA_P-littoralis_Contig1023.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1553bp|location=Sequence derived from alignment at P-littoralis_Contig1023:59662..61214+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1023:59662..61214+ >mRNA_P-littoralis_Contig1023.9.1 ID=mRNA_P-littoralis_Contig1023.9.1|Name=mRNA_P-littoralis_Contig1023.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=738bp|location=Sequence derived from alignment at P-littoralis_Contig1023:59662..61214+ (Pylaiella littoralis U1_48)back to top |