mRNA_P-littoralis_Contig1023.9.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1023.9.1
Unique NamemRNA_P-littoralis_Contig1023.9.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 434 bits (1117), Expect = 8.660e-149
Identity = 195/246 (79.27%), Postives = 217/246 (88.21%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            +VLGVLQVLGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW  W+RLPEG+ L++VES Y  LG+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF  R KID+AWFTACIIHNM
Sbjct:  210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNM 455          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 5.410e-146
Identity = 189/246 (76.83%), Postives = 215/246 (87.40%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            +VLGVLQVLGRGNCFADVA  SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V   Y  +G PGAV S DCTH++W  C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ HTGGWLIVDGGYHRVP LICP+K YAS  QQEWSKRFES+RKDIEC FGRLKGRFRLFKTGILF +REKIDNAWFTACIIHNM
Sbjct:  112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNM 357          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 391 bits (1005), Expect = 4.190e-136
Identity = 182/246 (73.98%), Postives = 201/246 (81.71%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            QVLGVLQ LGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW  W+RLPEG+DL++VES Y  LG+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV                 YKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKD+EC FGRLKGRFRLFKTGILF  R KID+A FTACIIH M
Sbjct:    5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTM 234          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 1.020e-135
Identity = 173/223 (77.58%), Postives = 195/223 (87.44%), Query Frame = 1
Query:   70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            MS++TAE+SFHRFC CFA GLW  W+RLPEG+DL++VES Y  LG+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI +GGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF  R KID+AWFTACIIHNM
Sbjct:    1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNM 223          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 1.760e-104
Identity = 133/223 (59.64%), Postives = 174/223 (78.03%), Query Frame = 1
Query:   70 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            MS +TAEKSFH FC+ F+  LW  WV+LP GD+LK+VE ++ + G+PGA+ S DCTH  W     SE  ++ GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY  DG+ + + G WL+VDGGY ++PLLI P K +A+VE+ +WS+R ES+RKDIEC +GR+KGRFRLFK GIL+ +R+ IDN WFTACI+HNM
Sbjct:    1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNM 223          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 1.230e-93
Identity = 127/185 (68.65%), Postives = 150/185 (81.08%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPY 555
             VLGVLQVLGRGNCFADVA  SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V   Y  +  PG V S DCTH++   C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWA YK+ L+ L+G ++ HTGGWLIVDGGYHRV  +   Y
Sbjct:  100 SVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRVSSVWVSY 284          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 5.450e-87
Identity = 125/210 (59.52%), Postives = 155/210 (73.81%), Query Frame = 1
Query:  109 CDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            C+ F+ GLW  WV+LP GD+LK+VE IY + G+PGA GS DCTH  W  C +SE N H GKEGYTS+V E  CDH+GRIIA+TK  PGAENDKTV+ RD S+ RI+ EEPW SY             +T  W+IVDGGY ++PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF   ILF++R+K DNA FTACI+HNM
Sbjct:   90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNM 286          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 6.420e-80
Identity = 129/272 (47.43%), Postives = 163/272 (59.93%), Query Frame = 1
Query:    7 LGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHR----------------------------VPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            +G L+VL  G CF DVA+FSLMS++TAE SFH FC+ F+ GLW  WV+LP GD+ K+                                N H GKEGYTS+V E  CDH+GRIIA+TK YPGAENDKTV+ RD S+ RI+ EEPW SY             +T  W+IVDGGY +                            +PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF   +LF++R+K+DNAWFTACI+HNM
Sbjct:    1 MGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKK--------------------------------NTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNM 227          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 1.710e-79
Identity = 118/246 (47.97%), Postives = 162/246 (65.85%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            QVL  LQ+L RGN FAD+ + S +S  T   +FHRFC  FA  L+ ++V LP G+DL++V   Y+++GFPGAVGS D TH+ W  C Y++  I+ GKEG  +V F+   DH+GR++A T+G+ GA NDKT+++ D +V RI+ +  +   KY+LY  DG      G +L+VD GYH+   LI P K         +SKR ES RKD+EC+FG LKGRFR+ K  I F+ +E IDN +FT CI+HNM
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 328          
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 8.060e-78
Identity = 117/246 (47.56%), Postives = 162/246 (65.85%), Query Frame = 1
Query:    1 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM 738
            +VL  LQ+L RGN FAD+ + S +S  T   +FHRFC  FA  L+ ++V LP G+DL++V   Y+++GFPGAVGS D TH+ W  C Y++  I+ GKEG  +V F+   DH+GR++A T+G+ GA NDKT+++ D +V RI+ +  +   KY+LY  DG      G +L+VD GYH+   LI P K         +SKR ES RKD+EC+FG LKGRFR+ K  I F+ +E IDN +FT CI+HNM
Sbjct:  174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 419          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1023.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0H2_9PHAE8.660e-14979.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE5.410e-14676.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY35_9PHAE4.190e-13673.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRU1_9PHAE1.020e-13577.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K604_9PHAE1.760e-10459.64Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8G0_9PHAE1.230e-9368.65DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K7N8_9PHAE5.450e-8759.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVL5_9PHAE6.420e-8047.43DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE1.710e-7947.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE8.060e-7847.56Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1023contigP-littoralis_Contig1023:59662..61214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size738
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.06e-58
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size738
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789362.459053-CDS-P-littoralis_Contig1023:59661..601921680789362.459053-CDS-P-littoralis_Contig1023:59661..60192Pylaiella littoralis U1_48CDSP-littoralis_Contig1023 59662..60192 +
1680789362.473173-CDS-P-littoralis_Contig1023:61007..612141680789362.473173-CDS-P-littoralis_Contig1023:61007..61214Pylaiella littoralis U1_48CDSP-littoralis_Contig1023 61008..61214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1023.9.1prot_P-littoralis_Contig1023.9.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1023 59662..61214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1023.9.1

>prot_P-littoralis_Contig1023.9.1 ID=prot_P-littoralis_Contig1023.9.1|Name=mRNA_P-littoralis_Contig1023.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=246bp
QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVR
LPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGY
TSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASY
KYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRF
ESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNM
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mRNA from alignment at P-littoralis_Contig1023:59662..61214+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1023.9.1 ID=mRNA_P-littoralis_Contig1023.9.1|Name=mRNA_P-littoralis_Contig1023.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1553bp|location=Sequence derived from alignment at P-littoralis_Contig1023:59662..61214+ (Pylaiella littoralis U1_48)
CAGGTGCTGGGGGTGCTGCAGGTATTGGGTAGAGGCAACTGCTTCGCGGA TGTTGCAAACTTTTCGCTGATGAGCCAATCTACGGCGGAGAAGTCCTTTC ACCGTTTCTGCGACTGCTTCGCGGGGGGCTTGTGGCATCAGTGGGTTCGG CTGCCTGAGGGCGATGACCTGAAGCAAGTGGAGAGCATCTACAACCAGCT GGGTTTTCCGGGGGCCGTAGGGTCAGCCGACTGCACCCACGTGGCGTGGG AGCGTTGTGCTTATTCGGAAACGAATATCCACAAGGGGAAGGAGGGGTAC ACGTCGGTTGTGTTCGAGGCGATTTGTGACCACGCTGGCCGCATCATCGC GTCGACGAAGGGGTACCCCGGGGCGGAGAACGACAAAACGGTGGTCAAGC GCGACTTGTCCGTCAACCGGATCCAACACGAGGAGCCGTGGGCGAGCTAC AAGTACGAGCTATACGGTCTTGATGGCACGAGTTCGTGGCACACGGGGGG GTGGCTGATCGTCGACGGGGGGTACCACCGGGTGAGTAAATTGTATGACG TGAGGGCAATGGTGTCGATGAAACCATGAGCGATTGTGAGTGCAGGTATA AATAGAGAGGAACCCCCACGCCCTGCAAAGCACAAGTGTGGTGCCGAAGT GTTGCTGTTGTCTTTCCATGGATACCCTCGTGCATGCCTTGAGGGCAATG GTTTACATTGGGTTGTTGCAGAGAGTTGCAGGTAAGAAAAGAGAGTAcCC CCCCCCCGCAAAGCATTGAGTCGTACCGAAGTGCTGCTGTTGTCTTTCCA AGAACCCCCTGCCTCCCCGTCGAGGGGGAACCAGCCCGCTGTATTTTCTC TAGTGTACCTTTTACGCAGACCAGAGAACCATTTGCTCCTGTTCACTTTT GCATCTGATGTCGGATGTAGAACCCGCTGAACTAAGACCAGCTATCCCAT TTGTGGGCGCCCCCCGACGTGTGTGTTGCCGGACATTAGTTGTTCTAGGT AACAATACCACAGGCCCATCACCTCGCATATTGGTCGCTTATCACCCTCC TGATCATGCACATTGCATCGCGATCTTGCGGTCTTGCGGCACGTAGCCCC CACTCGATAGAAGCATCTGATCAGCATCGATATGAGGTATCCGGTTGCTC TCATAATATCTCCGAGGATTTGTGGCTGCGGCCTACATTTTTTCTCCGGT TTGCAGTCAATCGAGAGTCCCACGTTTTTTTTATGCATTACTTGTTTCGA GGTTTTAAAACTGAATTTCCGGATCGACGAAACATAGGCCCTTACCACGT TCCTTTTTCCGTTCTTTCGCCCCTGCTCTTTTTGGCCGTACACCAGGTAC CCCTTCTCATATGCCCGTATAAAACGTACGCGAGCGTTGAACAGCAGGAG TGGAGCAAGAGATTCGAGTCAGTACGCAAGGACATTGAGTGCTTTTTCGG AAGACTCAAGGGGCGGTTCAGGTTGTTCAAGACCGGCATTTTGTTCAACA GCCGGGAGAAGATCGACAACGCCTGGTTCACGGCTTGCATCATTCACAAC ATG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1023:59662..61214+

>mRNA_P-littoralis_Contig1023.9.1 ID=mRNA_P-littoralis_Contig1023.9.1|Name=mRNA_P-littoralis_Contig1023.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=738bp|location=Sequence derived from alignment at P-littoralis_Contig1023:59662..61214+ (Pylaiella littoralis U1_48)
CAGGTGCTGGGGGTGCTGCAGGTATTGGGTAGAGGCAACTGCTTCGCGGA
TGTTGCAAACTTTTCGCTGATGAGCCAATCTACGGCGGAGAAGTCCTTTC
ACCGTTTCTGCGACTGCTTCGCGGGGGGCTTGTGGCATCAGTGGGTTCGG
CTGCCTGAGGGCGATGACCTGAAGCAAGTGGAGAGCATCTACAACCAGCT
GGGTTTTCCGGGGGCCGTAGGGTCAGCCGACTGCACCCACGTGGCGTGGG
AGCGTTGTGCTTATTCGGAAACGAATATCCACAAGGGGAAGGAGGGGTAC
ACGTCGGTTGTGTTCGAGGCGATTTGTGACCACGCTGGCCGCATCATCGC
GTCGACGAAGGGGTACCCCGGGGCGGAGAACGACAAAACGGTGGTCAAGC
GCGACTTGTCCGTCAACCGGATCCAACACGAGGAGCCGTGGGCGAGCTAC
AAGTACGAGCTATACGGTCTTGATGGCACGAGTTCGTGGCACACGGGGGG
GTGGCTGATCGTCGACGGGGGGTACCACCGGGTACCCCTTCTCATATGCC
CGTATAAAACGTACGCGAGCGTTGAACAGCAGGAGTGGAGCAAGAGATTC
GAGTCAGTACGCAAGGACATTGAGTGCTTTTTCGGAAGACTCAAGGGGCG
GTTCAGGTTGTTCAAGACCGGCATTTTGTTCAACAGCCGGGAGAAGATCG
ACAACGCCTGGTTCACGGCTTGCATCATTCACAACATG
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