mRNA_P-littoralis_Contig1023.4.3 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A6H5JUF8_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF8_9PHAE) HSP 1 Score: 492 bits (1266), Expect = 7.340e-168 Identity = 293/427 (68.62%), Postives = 322/427 (75.41%), Query Frame = 1
Query: 193 MAHRELQGRIQLAEQQVRMYSEAMEHLIATPATS-PDNSKLRQQTGARNRGSSHE-----FSGVGETTYGSAQPTKVA-EDITGREGVKAAAGAEGGANDCSDTRGGEAKPANEKICVDPGAEGGNVGRAESLGSVRPTRRGPD--------VSWCKIGKETVGWVARPGAHGEHSQLLNEIQAVQKRRAAVWRERKLLAKTTAELARCRAXXXSXXXXXXXXRSDVAEARQNCRSRKALYSEQLVSAMRMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLPLC 1428
MA+RELQGR+QLAEQQVRMY EAMEHLIA P+ + P S+ R + G + E F+G GE + +P A D+ G KA A AEG + SD G K ++ D AEG AES +GP V W IG+ T GW+A+ A EH +LL E+ V++RRAAVW+ER+LLAK AE XXX XXXXXXXX SDVA+ARQNCRSRKALYSEQLVSAMRMGALNDCFHIWHQGPF TINGFRVGRLN+HVVDWQEVNAGVGQAAIVLVT VAMAMGVEF+KYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFL CLGEVGDHVQEHDPTL+LPYHIK+KEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLP C
Sbjct: 1 MAYRELQGRLQLAEQQVRMYREAMEHLIAAPSAAYPAASQSRASPISTTAGVAQENLSKIFAG-GENDPDNTKPAPGAIPDVATTGGAKAEAVAEGDDDSVSDHGRGGTKKEVPRLSSDD-AEG-----AESSAGSTAAEKGPSIWGFIGGAVGW--IGEGTAGWMAQSEARREHHRLLGEVGKVRRRRAAVWQERELLAKARAEXXXXXXXXXXXXXXXXXXXSDVADARQNCRSRKALYSEQLVSAMRMGALNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVT-VAMAMGVEFTKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLKLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLPPC 417
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A836CRQ0_9STRA (Autophagy protein Apg6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRQ0_9STRA) HSP 1 Score: 204 bits (520), Expect = 4.390e-56 Identity = 131/336 (38.99%), Postives = 169/336 (50.30%), Query Frame = 1
Query: 598 PDVSWCKIGKETVGWVARPGAHGEHSQLLNEIQAVQKRRAAVWRERKLLAKTT----------------------------------AELARCRAXXXSXXXXXXXXRSDVAEARQNCRSRKALYSEQLVSAMRMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYL-------------IAPCGSFTKIARSEDG----------------RVLYSLHTDESFSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKY 1416
P W +G + V ++ GA E L E++ VQ RR AV RER+ +A+ A+L RA + + E +CR R+AL +L ND FHIW+ G ATINGFRVGRL S V W E+NAG+GQAAI L T VA AM ++FS+Y+ + P GSF+++A S R L++L +DE FSLFP R+ N AL+AF QC+GE G + DPTL LP+ + D GTVGG PVALGS E WTRA+KY LT+LKW+ AW AKY
Sbjct: 73 PGGVWGFLG-DAVHRLSLMGAVPEEDALAGELRGVQARRRAVQREREQVAQRCVGGNVEXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLLSARAQVDERTLCLEAEIAALGEEVASCRQRRALADARLARLSGTHVANDAFHIWYAGALATINGFRVGRLPSVQVGWPEINAGLGQAAIAL-TLVAGAMKLKFSRYIPTYARAEPPSRHAVLPLGSFSRMAASNXXXXXXXXXXXXXXXXXXRTLHALFSDEGFSLFPHRSLNAALRAFAQCVGEAGQRAAQRDPTLALPHRVDDAAGTVGGAPVALGSDLEAWTRAMKYTLTNLKWLLAWVAKY 406
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A4D9D4J3_9STRA (APG6 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4J3_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.720e-46 Identity = 107/278 (38.49%), Postives = 155/278 (55.76%), Query Frame = 1
Query: 652 PGAHGEHSQLLNEIQAVQKRRAAVWRERKLLAKTTAELARCRAXXXSXXXXXXXXRSDVAEARQNCRSRKALYSEQLVSAMRMGALNDCFHIWHQGPFATINGFRVGRLNSHV-VDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKIARSE------DGRVL-----------YSLHTDES-FSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYED-WTRALKYMLTDLKWIAAWAAKYLPL 1425
P AH H + L ++AV+ RR + R R L+ K L S D++E Q + +L + ++ NDCFH+WH GPFAT+NG +GRL + V+W ++NAG+GQA ++L T V G F + + P GSF+KI RS + +V+ S + DE+ + FPRRN N AL AFLQC+ E G HV+ DPT+RLP+ ++D + +GGLP+ ED W RALKY+LTDLKW++AW+A+++ L
Sbjct: 8 PEAHILHLREL--LKAVEARRITLHRRRALVEKKRRRLQGLLDLWQSLNNSAAESLLDLSENHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWIDINAGLGQAILLLDTLVKQT-GFRFRRLELVPFGSFSKILRSPCDLSDVETKVMPNSPRFTASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQDNK--IGGLPIVFTPGEEDTWNRALKYLLTDLKWLSAWSARHVLL 280
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A7S3H0Z9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0Z9_9STRA) HSP 1 Score: 168 bits (425), Expect = 5.760e-44 Identity = 79/175 (45.14%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 895 RMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVLYSLHTDE-SFSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKY 1416
++ LND F++W+ GPFATIN F++G L + V+ E+NA +GQAA+VL + G+EF ++ I P GSF KI +++D R Y L D SFS FP+RNFN AL F+QC+ E+G+++ +DPTL +PY I+ E + G E WT ALK+ML ++KWI AW K+
Sbjct: 131 QINTLNDAFYVWYTGPFATINAFKLGNLVNKPVESTEINAALGQAALVL-NIITSRCGIEFKQFHIVPMGSFAKILKADDRRTSYPLFIDAGSFSFFPKRNFNLALSGFMQCIHELGEYISAYDPTLSVPYKIEVSESKIADKSFVYGGDEEVWTHALKHMLANIKWIIAWYCKH 304
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A067BKQ5_SAPPC (APG6 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BKQ5_SAPPC) HSP 1 Score: 158 bits (399), Expect = 1.100e-40 Identity = 84/183 (45.90%), Postives = 115/183 (62.84%), Query Frame = 1
Query: 871 SEQLVSAMRMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKI--ARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAK 1413
S+ L R ND FHIWH+G F TING R+GRL S V+W E+NA +GQA ++L T VA + F+++ GS++K+ A S+D R Y L++D SF F R+ FN AL FL+C+ E G +P+LR PY I +G +G L +++G + E WTRALKY+LT LKW+ AW AK
Sbjct: 84 SDVLRCLQRYNVFNDTFHIWHEGSFGTINGLRLGRLPSKPVEWAEINAALGQATLLLAT-VASRANLNFARHTPVARGSYSKMLTAPSKDKRKEYPLYSDGSF--FQRQKFNQALVFFLECVDEAGVRAMREEPSLRFPYKIY--KGKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWIAK 261
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A3M6V8C9_9STRA (APG6 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8C9_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.970e-40 Identity = 79/173 (45.66%), Postives = 108/173 (62.43%), Query Frame = 1
Query: 895 RMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAK 1413
R ND FHIWH G F TING R+GRL S V+W E+NA +GQA ++L T +A G EFS+ + P GSF+++ +LYS +F RR FN A+ FL+C+ + G + +P L+ PY ++ G +GGLP++LG+ E WTRALKYMLT LKW+ AW +K
Sbjct: 7 RYNVCNDVFHIWHDGLFGTINGLRLGRLPSKPVEWVEINAAMGQAVLLLAT-IADRAGFEFSRNRLVPRGSFSRVVN-----ILYS-----DGGMFRRRGFNQAMILFLECVEDAGRRAMKEEPLLKFPYKVE--RGKIGGLPISLGND-EQWTRALKYMLTHLKWLLAWISK 165
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: T0RCX9_SAPDV (APG6 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RCX9_SAPDV) HSP 1 Score: 163 bits (413), Expect = 1.460e-39 Identity = 95/238 (39.92%), Postives = 133/238 (55.88%), Query Frame = 1
Query: 715 AAVWRERKLLAKTTAELARCRAXXXSXXXXXXXXRSDVAEARQNCRSRKALYSEQLVSAMRMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKI--ARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLP 1422
A V R R+L+ ELA + + E R + + S+ L R ND FHIWH+G F TING R+GRL S V+W E+NA +GQA ++L T VA + F+++ GS++K+ A+S+D R Y L++D SF F R+ FN AL FL+C+ E G +P+LR PY I +G +G L +++G + E WTRALKY+LT LKW+ AW AK P
Sbjct: 429 AMVLRNRELIWSCATELATLQRDSFDHGAVVQLLHASTKEERSSVSTFAVHASDVLRCLQRYNVFNDTFHIWHEGSFGTINGLRLGRLPSKPVEWAEINAALGQATLLLAT-VAGRANLTFARHTPVARGSYSKMLTAQSKDKRKEYPLYSDGSF--FQRQKFNQALVFFLECVDEAGVRAMREEPSLRFPYKIY--KGKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWIAKRYP 661
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A1V9ZC45_9STRA (Beclin-1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC45_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.660e-39 Identity = 98/261 (37.55%), Postives = 142/261 (54.41%), Query Frame = 1
Query: 646 ARPGAHGEHSQLLNEIQAVQKRRAAVWRERKLLAKTTAELARCRAXXXSXXXXXXXXRSDVAEARQNCRSRKALYSEQLVSAMRMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKIARS--EDGRVLYSLHTDESFSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLP 1422
++ A E +L+NE V + R R+L+ ELA + + E R + + S+ L R +ND FHIWH+G F TING R+GRL S V+W E+NA +GQA ++L T VA ++F+++ GS++K+ S ++ R Y L++D SF F R+ FN AL FL+C+ E G +PTLR PY I +G +G L +++G + E WTRALKY+LT LKW+ AW AK P
Sbjct: 364 SKSAALSEILRLINEESQV------ILRNRELIWSCATELASLQHQTFDEGAIVQLASTFTKEERTSVGTFAVHASDMLRCLQRYNVMNDTFHIWHEGSFGTINGLRLGRLPSKPVEWTEINAALGQATLLLAT-VASRANLQFARHTPVARGSYSKMLTSHGKERRREYPLYSDGSF--FQRQKFNQALVFFLECVDEAGQRAMREEPTLRFPYKIF--KGKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWVAKRYP 613
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A7S2C4Q6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4Q6_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.320e-39 Identity = 80/190 (42.11%), Postives = 119/190 (62.63%), Query Frame = 1
Query: 877 QLVSAMRMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKIA-RSEDGRV-----LYSLHTDES--FSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYED--WTRALKYMLTDLKWIAAWAAKY 1416
QL + +M A NDCF+IWH GPF TINGFR+GRL V+W E+NA +GQ A++L T + ++ S L+ P GS++++A + G+V ++L+ + S + +F+ AL+ LQ +GE G+++ E DP RLPY + + + +P+ G S D WTRALK+MLTD+KWI AWAAK+
Sbjct: 15 QLEATSQMNAANDCFYIWHAGPFGTINGFRLGRLPVETVEWHEINAALGQVALLLET-IENETPLQLSLTLL-PLGSYSQVAIPNSQGKVDEKSKRFNLYASDGGVLSFGQKGSFHKALEYLLQIIGEAGNYISEQDPAFRLPYAVSEGGRYINNIPITYGGSNSDELWTRALKFMLTDVKWIVAWAAKH 202
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Match: A0A3R7EER2_9STRA (APG6 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EER2_9STRA) HSP 1 Score: 155 bits (392), Expect = 5.350e-39 Identity = 82/187 (43.85%), Postives = 110/187 (58.82%), Query Frame = 1
Query: 871 SEQLVSAMRMGALNDCFHIWHQGPFATINGFRVGRLNSHVVDWQEVNAGVGQAAIVLVTAVAMAMGVEFSKYLIAPCGSFTKIARSEDGRVL---YSLHTDESFSLFPRRNFNFALKAFLQCLGEVGDHVQEHDPTLRLPYHIKDKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLP 1422
S+ L R ND FHIWH+GPF TING R+GRL S V+W E+NA +GQA ++L T VA G+ F+K++ GS++K+ ++ V Y L D F R+ FN ALK L+C+ E G +P+LR PY I +G L + +G + E WTRALKY+LT LKW+ AW AK P
Sbjct: 152 SDMLRCLQRYNVFNDAFHIWHEGPFGTINGLRLGRLPSRPVEWAEINAALGQATLLLTT-VAQRAGMVFAKHVPVARGSYSKMLVAQGSGVKRKEYPLFNDGGF--LQRQKFNTALKCLLECVDEAGRQAIVEEPSLRFPYKIT--RAKIGDLSIEVGGNDEQWTRALKYLLTHLKWLLAWVAKRYP 333 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1023.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1023.4.3 >prot_P-littoralis_Contig1023.4.3 ID=prot_P-littoralis_Contig1023.4.3|Name=mRNA_P-littoralis_Contig1023.4.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=413bp MAHRELQGRIQLAEQQVRMYSEAMEHLIATPATSPDNSKLRQQTGARNRGback to top mRNA from alignment at P-littoralis_Contig1023:16224..26409+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1023.4.3 ID=mRNA_P-littoralis_Contig1023.4.3|Name=mRNA_P-littoralis_Contig1023.4.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=10186bp|location=Sequence derived from alignment at P-littoralis_Contig1023:16224..26409+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1023:16224..26409+ >mRNA_P-littoralis_Contig1023.4.3 ID=mRNA_P-littoralis_Contig1023.4.3|Name=mRNA_P-littoralis_Contig1023.4.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1239bp|location=Sequence derived from alignment at P-littoralis_Contig1023:16224..26409+ (Pylaiella littoralis U1_48)back to top |