mRNA_P-littoralis_Contig1022.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig1022.2.1
Unique Name	mRNA_P-littoralis_Contig1022.2.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5JQ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ53_9PHAE)

HSP 1 Score: 580 bits (1496), Expect = 1.220e-198
Identity = 298/356 (83.71%), Postives = 318/356 (89.33%), Query Frame = 1

Query:  823 GENGRRQPTVEELAAHDGESTTTRKAQHKLGKVVNKIQLQKFMESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPMIWGCSVD 1887
            GE GRRQPTV ELAAHDGESTT RKAQHKLGK +NKIQL+KFMESLEHLP+EAVPPT D+P GG EA++MA AR RSSQG GGH F  AA TDRAREIP NEFVYATRRAL VEE+LA  CPRCHRGR+  IITT+ ARTC RDGAQVNMHEPLKYALSRAL+GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDG AAQASEARKRQH+A PGHVSFDERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRR+QRYKLAL GRQ+AE R  RST   STPMIWG SVD
Sbjct:  134 GETGRRQPTVAELAAHDGESTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHTFLRAAATDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCQRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYACPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRLQRYKLALHGRQDAENRRTRSTSDQSTPMIWGWSVD 489

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BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5KDZ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ4_9PHAE)

HSP 1 Score: 575 bits (1481), Expect = 6.670e-198
Identity = 298/356 (83.71%), Postives = 318/356 (89.33%), Query Frame = 1

Query:  823 GENGRRQPTVEELAAHDGESTTTRKAQHKLGKVVNKIQLQKFMESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPMIWGCSVD 1887
            GE  RRQPTV ELAAHD ESTT RKAQHKLGK V+KIQL+KFMESLEHLP+EAVP T D+P GG EA++MA AR RSSQG G HAF  AAPT+RAREIP NEFVYATRRAL VEE+LA  CPRCHRGR+  IITT+ ARTC RDGAQVNMHEPLKYALSRAL+GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDG AAQASEARKRQH+ARPGHVSFDERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRRVQRYKLALRGRQ+AE R  RST   STPMIWG SVD
Sbjct:   36 GETRRRQPTVAELAAHDEESTTPRKAQHKLGKAVSKIQLEKFMESLEHLPQEAVPHTRDNPYGGQEARNMAYARTRSSQGQGEHAFLKAAPTERAREIPLNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCRRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGRQDAENRRTRSTSDQSTPMIWGWSVD 391

[Close]

BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5LLI3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLI3_9PHAE)

HSP 1 Score: 577 bits (1488), Expect = 1.430e-197
Identity = 296/356 (83.15%), Postives = 318/356 (89.33%), Query Frame = 1

Query:  823 GENGRRQPTVEELAAHDGESTTTRKAQHKLGKVVNKIQLQKFMESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPMIWGCSVD 1887
            GE GRRQPTV ELAAHDGE TT RKAQHKLGK +NKIQL+KFMESLEHLP+EAVPPT D+P GG EA++MA AR RSSQG GGHA   AAPTDRAREI  NEF YATRRAL +EE+LA  CPRCHRGR+  IITT+ ARTC RDGAQVNMHEPLKYALSRAL+GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDG AAQASEARKRQH+ARPGHVSFDERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRRVQRYKLALRG Q+AE R  RST + STPM+WG SVD
Sbjct:  125 GETGRRQPTVAELAAHDGEYTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHALLRAAPTDRAREIQSNEFGYATRRALEIEEFLAERCPRCHRGREGEIITTVHARTCRRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGGQDAENRRTRSTSNQSTPMMWGWSVD 480

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BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 586 bits (1511), Expect = 5.010e-191
Identity = 299/356 (83.99%), Postives = 321/356 (90.17%), Query Frame = 1

Query:  823 GENGRRQPTVEELAAHDGESTTTRKAQHKLGKVVNKIQLQKFMESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPMIWGCSVD 1887
            GE GRRQPTV ELAAHDGESTT RKAQHKLGK +NKIQL+KFMESLEHLP+EAVPPT D+P GG EA++MA AR RSSQG GGHAF  AAPTDRAREIP NEFVYATRRAL +EE+LA  CPRCHRGR+  IITT+ ARTC RDGAQVNMHEPLKYALSRAL+GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDGT  QASEARKRQH++RPGHVS DERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRRVQRYKLALRGRQ+AE R  RST + STPMIWG SVD
Sbjct:  881 GETGRRQPTVAELAAHDGESTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGIEEFLAERCPRCHRGREGEIITTVHARTCPRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGTEIQASEARKRQHYSRPGHVSLDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGRQDAENRRTRSTSNQSTPMIWGWSVD 1236

[Close]

BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 549 bits (1414), Expect = 2.040e-180
Identity = 290/383 (75.72%), Postives = 317/383 (82.77%), Query Frame = 1

Query:  823 GENGRRQPTVEELAAHDGESTTTRKAQHKLGKVVNKIQLQKFMESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLK---------------------------YALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPMIWGCSVD 1887
            GE GRRQPTV ELAAHDGESTT RKAQHKLGK +N IQL+K MESL+HLP+EAVPPT D+P GG EA++MA AR RSS+G GGHAF  AAPTDRAREIP NEFVYATRRAL VEE+LA  CPRCH+GR+  IITT+ ARTC RDGAQVNMHEPLK                           YALSRAL+GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVT+ADPQAQVHLRNGSATSDGTAAQASEARKRQH+ARPGH  F ERS +LTT+AVESFGRLGEEGYEF+DELAT+A GGRDGG+MA KGV+ ERLLQ++SVATQVAISRRVQRYKLALRGRQ+A+ R  RST + STPMIWG SVD
Sbjct:  528 GETGRRQPTVAELAAHDGESTTPRKAQHKLGKAINDIQLEKLMESLKHLPQEAVPPTRDNPYGGQEARNMAYARTRSSKGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHKGREGQIITTVQARTCSRDGAQVNMHEPLKXXXXXXXXXXXXXXXXXXXXXXXXXXKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTNADPQAQVHLRNGSATSDGTAAQASEARKRQHYARPGHA-FVERSLKLTTIAVESFGRLGEEGYEFIDELATYAVGGRDGGTMALKGVFNERLLQIVSVATQVAISRRVQRYKLALRGRQDADNRRTRSTSNQSTPMIWGWSVD 909

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BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5JPW7_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW7_9PHAE)

HSP 1 Score: 518 bits (1335), Expect = 4.660e-177
Identity = 266/314 (84.71%), Postives = 284/314 (90.45%), Query Frame = 1

Query:  949 MESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPMIWGCSVD 1887
            MESLEHLP+EAVPPT D+P GG EA++MA AR RSSQG GGHAF  AAPTDRAREIP NEFVYATRRAL VEE+LA  CPRCHRGR+  IITT+ ARTC RDGAQVNMHEPLKYALSRAL+GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDG AAQASEARKRQH+ARPG+VSFDERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRRVQRYKLALRGRQ+AE R  RST   STPMIWG SVD
Sbjct:    1 MESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCRRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGNVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGRQDAENRRTRSTSDQSTPMIWGWSVD 314

[Close]

BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5JUN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN7_9PHAE)

HSP 1 Score: 513 bits (1321), Expect = 3.570e-174
Identity = 263/317 (82.97%), Postives = 283/317 (89.27%), Query Frame = 1

Query:  940 QKFMESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEG-RIRSTPHASTPMIWGCSVD 1887
            +KFMESLEHLP+EAVPPT D+P GG EA++MA AR RSSQG GGHAF  AAPTDRAREIP NEFVYATRRAL VEE+LA  CPRCHRGR+  IITT+ ART  RDGAQVNMH+PLKYALSRA +GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDG AAQASEARKRQH+ARPGHVSFDERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRRVQRYKLALRGRQ+AE  R RST    TP +WG SVD
Sbjct:    7 EKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTFPRDGAQVNMHKPLKYALSRACNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGRQDAENTRTRSTSDQPTPTLWGWSVD 323

[Close]

BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5K198_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K198_9PHAE)

HSP 1 Score: 506 bits (1302), Expect = 1.030e-171
Identity = 260/311 (83.60%), Postives = 278/311 (89.39%), Query Frame = 1

Query:  955 SLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPMIWGCSV 1884
            S EHLP++AVPPT D+P GG EA++MA AR RSSQG GGHAF  AAPTDRAREIP NEFVYATRRAL VEE+LA  CPRCHRGR+  IITT+ ARTC RDGAQVNMHEPLKYALSRAL+GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDG AAQASEARKRQH+ARPGHVSFDERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRRVQRYKLALRGRQ+AE R  R T   STPMIW  SV
Sbjct:   26 SWEHLPQQAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCPRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGRQDAENRRTRLTSDQSTPMIWRWSV 336

[Close]

BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5KEX1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEX1_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 3.250e-171
Identity = 261/307 (85.02%), Postives = 277/307 (90.23%), Query Frame = 1

Query:  949 MESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPM 1866
            MESLEHLP EAVPPT D+P GG EA++MA AR RSSQG GGHAF  AAPTDRAREIP NEFVYATRRAL VEE+LA  CPRCHRGR+  IITT+ ARTC RDGAQVNMHEPLKYALSRAL+GLR +HDVE GAPFTGERNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDG AAQASEARKRQH+ARPGHVSFDERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRRVQRYKLALRGRQ+AE R  RST   STPM
Sbjct:    1 MESLEHLPHEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCRRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGRQDAENRRTRSTSDQSTPM 307

[Close]

BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Match: A0A6H5JS53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS53_9PHAE)

HSP 1 Score: 499 bits (1286), Expect = 1.150e-167
Identity = 271/360 (75.28%), Postives = 295/360 (81.94%), Query Frame = 1

Query:  823 GENGRRQPTVEELAAHDGESTTTRKAQHKLGKVVNKIQLQKFMESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPTDRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCLRD---GAQVNMHEPLKYAL-SRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPGALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDGGSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGR-IRSTPHASTPMIWGCSVD 1887
            GE GRRQPTV ELAAHDGESTT RKAQHKLGK +NKIQL+KFMESLEHLP+EAVPPT D+P GG EA++MA AR RSSQG GGHAF  AAPTDRAREIP NEFVYATRRAL VE                G ++ +P R   RD   GA+ ++ +       +RAL+GL  +HDVE GAPFTG RNLSMDIVIRPGAL NASSP YRNKGILLDVTHADPQAQVHLRNGSATSDG AAQASEARKRQH+ARPGHVSFDERSF+LTTLAVESFGRLGEEGYEF+DELATHA GGRDGG+MA KGV+KERLLQ++SVATQVAISRRVQRYKLALRG Q+AE R  RST   STPMIWG SVD
Sbjct:   97 GETGRRQPTVAELAAHDGESTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEGL-------------GGKMSQVPQRQGRRDHHNGARKDLSKGWSTGQHARALNGLGVKHDVESGAPFTGARNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGHQDAENRRTRSTSDQSTPMIWGWSVD 443

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1022.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JQ53_9PHAE	1.220e-198	83.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDZ4_9PHAE	6.670e-198	83.71	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LLI3_9PHAE	1.430e-197	83.15	Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KMQ2_9PHAE	5.010e-191	83.99	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JLG6_9PHAE	2.040e-180	75.72	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JPW7_9PHAE	4.660e-177	84.71	Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUN7_9PHAE	3.570e-174	82.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K198_9PHAE	1.030e-171	83.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KEX1_9PHAE	3.250e-171	85.02	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JS53_9PHAE	1.150e-167	75.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1022	contig	P-littoralis_Contig1022:6402..8777 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	2298
Hectar predicted targeting category	other localisation
Exons	2
Cds size	948

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789362.006737-UTR-P-littoralis_Contig1022:6401..6803	1680789362.006737-UTR-P-littoralis_Contig1022:6401..6803	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1022 6402..6803 -
1680789362.0297287-UTR-P-littoralis_Contig1022:7751..8603	1680789362.0297287-UTR-P-littoralis_Contig1022:7751..8603	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1022 7752..8603 -
1680789362.0401995-UTR-P-littoralis_Contig1022:8681..8777	1680789362.0401995-UTR-P-littoralis_Contig1022:8681..8777	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1022 8682..8777 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789362.018833-CDS-P-littoralis_Contig1022:6803..7751	1680789362.018833-CDS-P-littoralis_Contig1022:6803..7751	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1022 6804..7751 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1022.2.1	prot_P-littoralis_Contig1022.2.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig1022 6804..7751 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig1022:6402..8777-
coding sequence from alignment at P-littoralis_Contig1022:6402..8777-

protein sequence of mRNA_P-littoralis_Contig1022.2.1

>prot_P-littoralis_Contig1022.2.1 ID=prot_P-littoralis_Contig1022.2.1|Name=mRNA_P-littoralis_Contig1022.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=316bp
MESLEHLPEEAVPPTIDDPLGGSEAKDMALARVRSSQGPGGHAFFIAAPT
DRAREIPPNEFVYATRRALNVEEYLAPGCPRCHRGRDVGIITTMPARTCL
RDGAQVNMHEPLKYALSRALHGLRAQHDVEGGAPFTGERNLSMDIVIRPG
ALANASSPEYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAQASEARKR
QHHARPGHVSFDERSFELTTLAVESFGRLGEEGYEFVDELATHAAGGRDG
GSMAQKGVYKERLLQVISVATQVAISRRVQRYKLALRGRQEAEGRIRSTP
HASTPMIWGCSVDEQ*

mRNA from alignment at P-littoralis_Contig1022:6402..8777-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig1022.2.1 ID=mRNA_P-littoralis_Contig1022.2.1|Name=mRNA_P-littoralis_Contig1022.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2376bp|location=Sequence derived from alignment at P-littoralis_Contig1022:6402..8777- (Pylaiella littoralis U1_48)
ATATTGAAAAAGCTATGTACAAATAAACTCCCAGAGGCTGAATAGCACCC
GCCCCCTAAAGTTATCGTCGAGCCTGGCTTACGGAGCGCGGATTTTGTAC
CACTGCTGTAGTCTGGGATGGTGAGGGAGGGTTTGTGCATCTACAACGGT
CCCTCTGGAATAACTTTATCACAGGCTGGAGGCAGACCGATCACGTTTTG
TAGGAAACGTTTTAAAAGCTACTTCCGAGTACTACCAAGTAGCTCCGGAA
CCCACCGTGTAGAAGTGGATCATCATACTTCCATTGCTAAAGTCCGTGCG
GAAGGTGGCCAGCCGCTCATCGTTGGGGGTGCTGGTTTTATTGTTGATTC
ACGTGGACCCCGACGTCCCGTCGCGCCCAGGGGGGTACGATGGATTCGGT
CAAAATCGTCGTCGATTTGATTTCGCGGCGATCGATCAGCGGGTAGAATG
AAGGGCAGGCGAGAAATGAAAAAAAAGACAACCGGATAGACTTTTTATGG
GTCAGCAAACCCTTGTAAAACGTTGAGAGCTTGCTCCAAACACCCAGCAC
TACAATATGCGCAAGAAAAGACTGCTGCCAAGCGGCGTACCGCGAAAACA
CCATTCTGGTACCGAAATTCCCTTGCGACGACACACATAAAAGCGCAGCT
CTGATGCCGGGAACCTGGTGGTATATACTGTTCCAAGCGTCGAGCCAAGC
ACCTGGGGGGATGATAAGTGCCAACCGGCGATGGCGGCGGAGCTCGACGG
CTGTCACGTTTGTGCATCAAGCCGTCCGTCACTTTCCCTCGTGATCAACG
ATAGTGTTCCGAAACACGGGATGGGAGGCTGCTGCAAATGCCCCAACACC
GCGAAAACAAATGATTCTAAACGACGTACTTCGAAGTATACAAACAAGAA
GGAGAAAACGGAAGACGTCAGCCTACAGTGGAAGAACTAGCAGCACACGA
CGGGGAATCCACTACGACAAGGAAGGCCCAGCACAAACTTGGAAAGGTTG
TCAACAAGATACAACTCCAAAAGTTTATGGAGTCTTTGGAGCACCTCCCT
GAGGAAGCCGTCCCACCCACGATAGACGACCCTCTGGGAGGTAGCGAAGC
CAAGGACATGGCGTTGGCAAGAGTACGAAGTTCGCAAGGGCCAGGGGGGC
ACGCGTTTTTCATAGCAGCACCCACCGACCGAGCTCGAGAGATACCACCG
AATGAATTCGTCTACGCAACGAGACGAGCTTTGAACGTCGAAGAATACTT
GGCCCCAGGATGTCCCAGGTGCCATAGAGGTAGGGACGTAGGGATCATCA
CCACCATGCCTGCGAGAACCTGTCTGCGAGATGGAGCACAGGTCAACATG
CACGAGCCACTAAAATACGCACTATCGAGAGCACTCCACGGCCTTCGGGC
GCAACACGACGTGGAAGGCGGAGCACCCTTCACGGGAGAACGAAACCTGA
GCATGGACATCGTCATCAGGCCAGGAGCCCTCGCAAACGCATCGTCTCCG
GAATACCGCAACAAAGGCATACTCCTCGATGTTACCCACGCAGACCCGCA
AGCACAGGTACACCTGCGGAACGGCAGCGCAACCAGCGATGGAACCGCAG
CCCAAGCCTCCGAGGCGCGAAAGCGCCAGCACCACGCTCGTCCGGGACAC
GTGTCCTTTGACGAGCGCAGCTTTGAACTTACCACCTTAGCGGTGGAAAG
CTTTGGCCGCCTTGGAGAGGAGGGTTACGAGTTCGTCGACGAACTAGCGA
CACATGCCGCAGGAGGAAGAGACGGGGGATCGATGGCGCAGAAAGGAGTC
TACAAGGAACGACTTCTTCAAGTCATTTCAGTGGCTACACAGGTGGCCAT
TTCGCGGAGAGTTCAGCGATACAAGCTGGCACTACGCGGACGTCAAGAGG
CGGAAGGAAGAATAAGATCAACCCCACACGCATCGACACCAATGATCTGG
GGATGCAGTGTCGATGAACAGTAGTAGTTAGAAGGAATATTGTTTTCGAA
TTTTTTCGTTCTGTTTCACAATAAGGAAGTTAGCTTGGATCGAAGATTAC
GTATTCACCGTATGTCTACTTCAAGTATAGTAGGGGAGAGAGGAATTCAG
TTGAATTTTGAGTTTTCACACACATATATATATGCGATGAGGCAGTAGCA
TGATAGCAAGACACATGGGTAACAAGAATGTATTGGAGCATGAGAGAGAA
CGATTACTGGTTGATATTGGTGCATATTTAGCTTCGGAAATTCGTGGAAT
ATACTAGTTGAGTGAGAGTTTTGTTTCATAGTCTACACCTATACTTATCG
GATGGCAAAAAAAAAAAAAATACAAACAAGACCGAGGCATGCACACAACA
AGGCGAATCGAATCCAATCCATTCCA

Coding sequence (CDS) from alignment at P-littoralis_Contig1022:6402..8777-

>mRNA_P-littoralis_Contig1022.2.1 ID=mRNA_P-littoralis_Contig1022.2.1|Name=mRNA_P-littoralis_Contig1022.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=948bp|location=Sequence derived from alignment at P-littoralis_Contig1022:6402..8777- (Pylaiella littoralis U1_48)
ATGGAGTCTTTGGAGCACCTCCCTGAGGAAGCCGTCCCACCCACGATAGA
CGACCCTCTGGGAGGTAGCGAAGCCAAGGACATGGCGTTGGCAAGAGTAC
GAAGTTCGCAAGGGCCAGGGGGGCACGCGTTTTTCATAGCAGCACCCACC
GACCGAGCTCGAGAGATACCACCGAATGAATTCGTCTACGCAACGAGACG
AGCTTTGAACGTCGAAGAATACTTGGCCCCAGGATGTCCCAGGTGCCATA
GAGGTAGGGACGTAGGGATCATCACCACCATGCCTGCGAGAACCTGTCTG
CGAGATGGAGCACAGGTCAACATGCACGAGCCACTAAAATACGCACTATC
GAGAGCACTCCACGGCCTTCGGGCGCAACACGACGTGGAAGGCGGAGCAC
CCTTCACGGGAGAACGAAACCTGAGCATGGACATCGTCATCAGGCCAGGA
GCCCTCGCAAACGCATCGTCTCCGGAATACCGCAACAAAGGCATACTCCT
CGATGTTACCCACGCAGACCCGCAAGCACAGGTACACCTGCGGAACGGCA
GCGCAACCAGCGATGGAACCGCAGCCCAAGCCTCCGAGGCGCGAAAGCGC
CAGCACCACGCTCGTCCGGGACACGTGTCCTTTGACGAGCGCAGCTTTGA
ACTTACCACCTTAGCGGTGGAAAGCTTTGGCCGCCTTGGAGAGGAGGGTT
ACGAGTTCGTCGACGAACTAGCGACACATGCCGCAGGAGGAAGAGACGGG
GGATCGATGGCGCAGAAAGGAGTCTACAAGGAACGACTTCTTCAAGTCAT
TTCAGTGGCTACACAGGTGGCCATTTCGCGGAGAGTTCAGCGATACAAGC
TGGCACTACGCGGACGTCAAGAGGCGGAAGGAAGAATAAGATCAACCCCA
CACGCATCGACACCAATGATCTGGGGATGCAGTGTCGATGAACAGTAG