Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 348 |
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Cds size | 345 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789361.917051-UTR-P-littoralis_Contig1022:45857..45860 | 1680789361.917051-UTR-P-littoralis_Contig1022:45857..45860 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1022 45858..45860 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789361.9313066-CDS-P-littoralis_Contig1022:45860..46205 | 1680789361.9313066-CDS-P-littoralis_Contig1022:45860..46205 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1022 45861..46205 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1022.16.1 >prot_P-littoralis_Contig1022.16.1 ID=prot_P-littoralis_Contig1022.16.1|Name=mRNA_P-littoralis_Contig1022.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bp
MPALRDPTPGCLLIPVQALIACLASVGVVQRQRLPVQPSAGLFRAPLAIS
RRTAHPFNSRWAIFRPQKLSCYTLHKSSSSDVSITFTWGWNVGTFEERVS
TEPGSMVRTPTYAL* back to topmRNA from alignment at P-littoralis_Contig1022:45858..46205- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1022.16.1 ID=mRNA_P-littoralis_Contig1022.16.1|Name=mRNA_P-littoralis_Contig1022.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=348bp|location=Sequence derived from alignment at P-littoralis_Contig1022:45858..46205- (Pylaiella littoralis U1_48)
ATGCCGGCTTTGAGGGACCCGACTCCGGGATGTTTGCTGATTCCGGTACA
GGCATTGATCGCATGTCTTGCTTCGGTTGGAGTAGTGCAGCGACAACGGC
TACCTGTCCAACCCAGTGCTGGGCTATTCCGTGCTCCCCTCGCGATTTCG
CGGCGCACGGCGCACCCGTTTAACTCACGTTGGGCTATTTTCCGTCCTCA
GAAGTTATCTTGTTACACATTGCACAAATCCTCGAGCTCGGACGTGTCTA
TCACCTTCACGTGGGGATGGAATGTTGGTACGTTTGAGGAGAGAGTTTCA
ACAGAACCAGGTTCAATGGTTCGGACGCCCACCTACGCTTTGTGAGGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1022:45858..46205- >mRNA_P-littoralis_Contig1022.16.1 ID=mRNA_P-littoralis_Contig1022.16.1|Name=mRNA_P-littoralis_Contig1022.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=345bp|location=Sequence derived from alignment at P-littoralis_Contig1022:45858..46205- (Pylaiella littoralis U1_48)
ATGCCGGCTTTGAGGGACCCGACTCCGGGATGTTTGCTGATTCCGGTACA
GGCATTGATCGCATGTCTTGCTTCGGTTGGAGTAGTGCAGCGACAACGGC
TACCTGTCCAACCCAGTGCTGGGCTATTCCGTGCTCCCCTCGCGATTTCG
CGGCGCACGGCGCACCCGTTTAACTCACGTTGGGCTATTTTCCGTCCTCA
GAAGTTATCTTGTTACACATTGCACAAATCCTCGAGCTCGGACGTGTCTA
TCACCTTCACGTGGGGATGGAATGTTGGTACGTTTGAGGAGAGAGTTTCA
ACAGAACCAGGTTCAATGGTTCGGACGCCCACCTACGCTTTGTGA back to top
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