mRNA_P-littoralis_Contig102.82.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig102.82.1
Unique NamemRNA_P-littoralis_Contig102.82.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 3.720e-107
Identity = 176/276 (63.77%), Postives = 207/276 (75.00%), Query Frame = 1
Query:    1 TIHSGFCIPV-QNSRDSHPSQ------GDLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRGLCVQELRAWLAMNNAVELTQVISQLSPEQAASRDALLRITEGTQTEDDWNLLK*RFTNTVGAAERDCFDTAVHIFPTNTKADERNRCRLNSIGTLIVRIDASHNVRGYQAVPADRVRDLQPNISLAVGARVFINNNVWVSAGLANGAIGEMVHMQLAEGKAPPQL 807
            TIH GF IPV Q++R S PS+       DLQ R+  VDFILVDEFSMVG+D+LGLMSA+G+QAVE R  +    F  DVFGGL  ILVGD AQL PVGA  LW   P + GL +Q L+AWL+MNNAVELTQV+ Q  PEQAA RD LLRI EG QT DDW++LK RF   VGAAER+ FD AVHIFPTN  AD+ N  RLNS+GT I RI+A+H + GY AV ++R R LQ +I LA+GARVF++N VWVSAGLANGA+GE+VHMQ AEG+ PPQL
Sbjct:    3 TIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQL 278          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 1.440e-105
Identity = 180/276 (65.22%), Postives = 209/276 (75.72%), Query Frame = 1
Query:    1 TIHSGFCIPV-QNSRDSHPSQ------GDLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRGLCVQELRAWLAMNNAVELTQVISQLSPEQAASRDALLRITEGTQTEDDWNLLK*RFTNTVGAAERDCFDTAVHIFPTNTKADERNRCRLNSIGTLIVRIDASHNVRGYQAVPADRVRDLQPNISLAVGARVFINNNVWVSAGLANGAIGEMVHMQLAEGKAPPQL 807
            TIH GF IPV Q++R S PS+       DLQ R+  VDFILVDEFSMVG+DMLGLMSA+G+QAVE R  +    F  DVFGGL  ILVGD AQL PVGAS LW   P + GL +Q L+AWL+MNNAVELTQV+ Q  PEQAA RD LLRI EG QT DDW++LK RF   VGAAER+ FD AVHIFPTN  AD+ N  RLNS+GT I RI+A+H + GY AV ++R R LQ +I LA+GARVF+NNNVWVSAGLANGA+GE+VHMQ AEG+ PPQL
Sbjct:  407 TIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQL 682          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 2.190e-103
Identity = 180/276 (65.22%), Postives = 209/276 (75.72%), Query Frame = 1
Query:    1 TIHSGFCIPV-QNSRDSHPSQ------GDLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRGLCVQELRAWLAMNNAVELTQVISQLSPEQAASRDALLRITEGTQTEDDWNLLK*RFTNTVGAAERDCFDTAVHIFPTNTKADERNRCRLNSIGTLIVRIDASHNVRGYQAVPADRVRDLQPNISLAVGARVFINNNVWVSAGLANGAIGEMVHMQLAEGKAPPQL 807
            TIH GF IPV Q++R S PS+       DLQ R+  VDFILVDEFSMVG+DMLGLMSA+G+QAVE R  +    F  DVFGGL  ILVGD AQL PVGAS LW   P + GL +Q L+AWL+MNNAVELTQV+ Q  PEQAA RD LLRI EG QT DDW++LK RF   VGAAER+ FD AVHIFPTN  AD+ N  RLNS+GT I RI+A+H + GY AV ++R R LQ +I LA+GARVF+NNNVWVSAGLANGA+GE+VHMQ AEG+ PPQL
Sbjct: 1148 TIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQL 1423          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 1.400e-82
Identity = 153/275 (55.64%), Postives = 182/275 (66.18%), Query Frame = 1
Query:    1 TIHSGFCIPVQN------SRDSHPSQGDLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRGLCVQELRAWLAMNNAVELTQVISQLSPEQAASRDALLRITEGTQTEDDWNLLK*RFTNTVGAAERDCFDTAVHIFPTNTKADERNRCRLNSIGTLIVRIDASHNVRGYQAVPADRVRDLQPNISLAVGARVFINNNVWVSAGLANGAIGEMVHMQLAEGKAPPQL 807
            TIH+G  + VQN         S  ++ DLQ +I GVDF+LVDEFSM+G+DMLG+MS + +QAVE R        HL +FGGL  I+VGD  QL  V  S +W   P S  L  Q L AWL MN AV+LTQV+ Q    QAA R+ LLRI EG  TE DWN L+ RFT  V AAER+ FD AVHIFPTN  AD+ N  RL ++GT I RIDA H++ GY  +P+DR R L+  + LAVGARVFINNNVW S GLANGA GE+VHMQ A G  PP L
Sbjct: 1218 TIHTGLRVGVQNRPRGDLGEISESARRDLQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSL 1492          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 2.070e-71
Identity = 125/196 (63.78%), Postives = 142/196 (72.45%), Query Frame = 1
Query:    1 TIHSGFCIPV-QNSRDSHPSQ------GDLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRGLCVQELRAWLAMNNAVELTQVISQLSPEQAASRDALLRITEGTQTEDDWNLLK*RFTNTVGAAERDCFDTAVHIFPTNTKADERN 567
            TIH GF IPV Q++R S PS+       DLQ R+  VDFILVDEFSMVG+DMLGLMSA+G+QAVE R  +    F  DVFGGL  ILVGD A L PVGAS LW   P + GL +Q L+AWL+MNNAVELTQV+ Q  PEQAA RD LLRI EG QT DDW++LK RF   VGAAER+ FD AVHIFPTN  AD+ N
Sbjct:   27 TIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWN 222          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 2.240e-57
Identity = 113/182 (62.09%), Postives = 132/182 (72.53%), Query Frame = 1
Query:    1 TIHSGFCIPV-QNSRDSHPSQ------GDLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRGLCVQELRAWLAMNNAVELTQVISQLSPEQAASRDALLRITEGTQTEDDWNLLK*RFTNTVGAAERDCFDTA 525
            TIH GF IPV Q++R S PS+       DLQ R+  VDFILVDEFSMVG+D+LGL+SA+G+QAVE R  +    F  DVFGGL  ILVGD AQL PVGAS LW   P + GL +Q L+AWL+MNNAVELT+V+ Q  PEQAA RD LLRI EG QT DDW++LK RF   VGAAER+ FD A
Sbjct:  525 TIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLISARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 1.320e-44
Identity = 81/122 (66.39%), Postives = 97/122 (79.51%), Query Frame = 1
Query:  442 QTEDDWNLLK*RFTNTVGAAERDCFDTAVHIFPTNTKADERNRCRLNSIGTLIVRIDASHNVRGYQAVPADRVRDLQPNISLAVGARVFINNNVWVSAGLANGAIGEMVHMQLAEGKAPPQL 807
            QT DDW++LK RF   VGAAER+ FD AVHIFPTN  AD+ N  RLNS+GT I RI+A+H + GY AV ++R R LQ +I LA+GARVF+NNN WVSAGLANGA+GE+VHMQ AEG+ PPQL
Sbjct:    2 QTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQL 123          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.010e-38
Identity = 86/138 (62.32%), Postives = 99/138 (71.74%), Query Frame = 1
Query:    1 TIHSGFCIPV-QNSRDSHPSQ------GDLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRGLCVQELRAWLAMNNAVELTQVISQLSP 393
            TIH GF IPV Q++R S PS+       DLQ R+  VDFILVDEFSMVG+DMLGLMSA+G+QAVE R  +    F  DVFGGL  ILVGD AQL PVGAS LW   P + GL +Q L+AWL+MNNAVELTQV+ Q  P
Sbjct:  836 TIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGP 973          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: A0A6J1SN02_FRAOC (ATP-dependent DNA helicase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SN02_FRAOC)

HSP 1 Score: 130 bits (327), Expect = 4.280e-31
Identity = 92/281 (32.74%), Postives = 142/281 (50.53%), Query Frame = 1
Query:    1 TIHSGFCIPVQNSR-DSHPSQG--DLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRG--------LCVQELRAWLAMNNAVELTQVISQLSPEQAAS--RDALLRITEGTQTEDDWNLLK*RFTNTVGAAERDCFDTAVHIFPTNTKADERNRCRLNSIGTLIVRIDASHNVRGYQAVPADRVRDLQPNISLAVGARVFINNNVWVSAGLANGAIGEMVHMQLAEGKAPPQ 804
            TI+S   IPV+  +    P++     Q  +  V F+++DE+SMVG  +LG M  + R    + +         D+F G    L+GD  QL PVG ++L+    ++ G        L  + +R  +    A   T V+  +S  QA +  RDAL R++ GT T+ D+ L + RF   V   ER+ F  AVH++ T     E N+ +L  +   + RI A H+  G     AD    L+  I LA G+RV + +N+W+ AGL NGA+G +V +     KAPP+
Sbjct:  123 TINSALKIPVKVKQYPEMPAEALRKFQDSMSNVKFLIIDEYSMVGSRLLGYMERRCRDGKPDSN---------DIFAGCFTWLIGDIKQLPPVGDATLYPKVNVNNGRRRRQQDCLSAEVIRGRMVF--ASFTTSVVLSVSQRQADNSLRDALDRVSIGTSTDADYQLFRARFKLNVAGEERETFRDAVHLYWTRAAVVEHNKRKLVDLQRPVARIPAKHHGPGAADGSADDAGGLEKVIYLAKGSRVMLRSNLWLRAGLVNGALGTVVDVIYHHDKAPPE 392          
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Match: UPI000A2A83DD (uncharacterized protein LOC110235051 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A83DD)

HSP 1 Score: 131 bits (330), Expect = 6.320e-31
Identity = 92/274 (33.58%), Postives = 139/274 (50.73%), Query Frame = 1
Query:    1 TIHSGFCIPVQ---NSRDSHPSQGDLQPRIIGVDFILVDEFSMVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSPVGASSLWCPTPLSRGLCVQELRAWLAMNNAVELT--QVISQLSPEQAASRDALLRITEGTQTEDDWNLLK*RFTNTVGAAERDCFDTAVHIFPTNTKADERNRCRLNSIGTLIVRIDASHNVRGYQAVPADRVRDLQPNISLAVGARVFINNNVWVSAGLANGAIGEMVHMQLAEGKAPPQL 807
            TIHS   +PV    N   S  S   LQ  +  +++IL+DE+SM+G+  LG +  + +QA         +  +  +FGGL  IL+GD  QL PV    L+   P S  +  Q   A+   + AV+LT  Q +   S EQ   RD LLR+ +G  T++DW LL  R   +V       F+ A  +F +N +    N  +LN +      I+A H+    + +P+D +  L+P + LA GA+V +  N+W S GL NGA G ++ +    G  PP L
Sbjct:  998 TIHSLLKLPVGPRGNKELSGQSLSRLQDNLKDIEYILIDEYSMLGQTTLGWIDKRCKQA---------KAIYNRIFGGLSVILIGDPGQLPPVADKPLYHAQP-SNPIGEQGYLAYKMFDMAVKLTVNQRVHGTSYEQQQFRDLLLRLRKGESTKEDWQLLLTRQPCSVENIAD--FNNATRLFYSNDEVSSYNHEQLNKLQQPCANINARHSSTTAKNLPSDELSGLEPVLYLAKGAKVMLTMNLWASVGLCNGATGTVIDIIYELGHMPPDL 1259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig102.82.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDL6_9PHAE3.720e-10763.77ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K558_9PHAE1.440e-10565.22ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE2.190e-10365.22ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE1.400e-8255.64ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KDM0_9PHAE2.070e-7163.78ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5KA18_9PHAE2.240e-5762.09ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KGT1_9PHAE1.320e-4466.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIQ7_9PHAE2.010e-3862.32ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6J1SN02_FRAOC4.280e-3132.74ATP-dependent DNA helicase n=1 Tax=Frankliniella o... [more]
UPI000A2A83DD6.320e-3133.58uncharacterized protein LOC110235051 n=1 Tax=Exaip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig102contigP-littoralis_Contig102:400394..401200 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5507.FOXG_07027P0
PFAMsHelitron_like_N,MULE,PIF1
Model size807
Max annot lvl4751|Fungi
KEGG koko:K15255
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.67e-06
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota,39RYU@33154|Opisthokonta,3P64X@4751|Fungi,3QU0F@4890|Ascomycota,21AWX@147550|Sordariomycetes,3TKC2@5125|Hypocreales,1FXW4@110618|Nectriaceae
EC3.6.4.12
DescriptionConserved hypothetical protein
Cds size357
COG categoryD
BRITEko00000,ko01000,ko03029,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789359.754109-UTR-P-littoralis_Contig102:400393..4007261680789359.754109-UTR-P-littoralis_Contig102:400393..400726Pylaiella littoralis U1_48UTRP-littoralis_Contig102 400394..400726 -
1680789359.7746468-UTR-P-littoralis_Contig102:401083..4012001680789359.7746468-UTR-P-littoralis_Contig102:401083..401200Pylaiella littoralis U1_48UTRP-littoralis_Contig102 401084..401200 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789359.766316-CDS-P-littoralis_Contig102:400726..4010831680789359.766316-CDS-P-littoralis_Contig102:400726..401083Pylaiella littoralis U1_48CDSP-littoralis_Contig102 400727..401083 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig102.82.1prot_P-littoralis_Contig102.82.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig102 400727..401083 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig102.82.1

>prot_P-littoralis_Contig102.82.1 ID=prot_P-littoralis_Contig102.82.1|Name=mRNA_P-littoralis_Contig102.82.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=119bp
MVGKDMLGLMSAQGRQAVEERSREPSRGFHLDVFGGLGNILVGDRAQLSP
VGASSLWCPTPLSRGLCVQELRAWLAMNNAVELTQVISQLSPEQAASRDA
LLRITEGTQTEDDWNLLK*
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mRNA from alignment at P-littoralis_Contig102:400394..401200-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig102.82.1 ID=mRNA_P-littoralis_Contig102.82.1|Name=mRNA_P-littoralis_Contig102.82.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=807bp|location=Sequence derived from alignment at P-littoralis_Contig102:400394..401200- (Pylaiella littoralis U1_48)
ACTATCCACAGCGGTTTCTGCATTCCCGTCCAGAACAGCCGCGACTCGCA CCCCAGCCAAGGTGATCTGCAGCCACGAATAATTGGCGTCGACTTCATCC TCGTGGACGAGTTCTCCATGGTGGGCAAGGACATGCTTGGCCTCATGAGC GCCCAAGGGAGGCAGGCCGTTGAGGAACGGAGCCGAGAACCGAGCCGCGG TTTCCACCTCGACGTGTTCGGAGGCCTGGGTAATATCCTCGTGGGCGACA GGGCCCAGCTTTCTCCCGTCGGAGCAAGCTCGTTGTGGTGCCCCACGCCT TTGTCGAGGGGCCTCTGCGTTCAAGAACTCCGGGCATGGTTAGCGATGAA CAACGCCGTGGAGCTCACGCAGGTCATATCCCAACTTAGCCCGGAACAGG CCGCCTCCCGCGACGCTCTTCTTCGCATCACGGAGGGCACTCAGACCGAG GACGACTGGAATCTCTTGAAGTGAAGGTTTACAAACACCGTCGGTGCTGC AGAGCGCGACTGCTTCGACACCGCTGTCCACATCTTCCCTACAAACACCA AAGCCGACGAACGGAACCGGTGCCGGTTGAACTCCATCGGAACGCTAATT GTAAGAATTGATGCTTCGCACAATGTCCGAGGCTATCAGGCTGTGCCGGC GGACAGGGTCAGAGATTTGCAGCCAAACATTTCCCTCGCCGTCGGAGCGC GGGTCTTCATCAACAACAACGTCTGGGTCTCTGCCGGGCTTGCGAACGGG GCCATCGGGGAGATGGTGCACATGCAGTTGGCGGAGGGCAAGGCACCGCC ACAACTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig102:400394..401200-

>mRNA_P-littoralis_Contig102.82.1 ID=mRNA_P-littoralis_Contig102.82.1|Name=mRNA_P-littoralis_Contig102.82.1|organism=Pylaiella littoralis U1_48|type=CDS|length=357bp|location=Sequence derived from alignment at P-littoralis_Contig102:400394..401200- (Pylaiella littoralis U1_48)
ATGGTGGGCAAGGACATGCTTGGCCTCATGAGCGCCCAAGGGAGGCAGGC
CGTTGAGGAACGGAGCCGAGAACCGAGCCGCGGTTTCCACCTCGACGTGT
TCGGAGGCCTGGGTAATATCCTCGTGGGCGACAGGGCCCAGCTTTCTCCC
GTCGGAGCAAGCTCGTTGTGGTGCCCCACGCCTTTGTCGAGGGGCCTCTG
CGTTCAAGAACTCCGGGCATGGTTAGCGATGAACAACGCCGTGGAGCTCA
CGCAGGTCATATCCCAACTTAGCCCGGAACAGGCCGCCTCCCGCGACGCT
CTTCTTCGCATCACGGAGGGCACTCAGACCGAGGACGACTGGAATCTCTT
GAAGTGA
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