mRNA_P-littoralis_Contig102.50.3 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 311 bits (796), Expect = 4.490e-96 Identity = 185/454 (40.75%), Postives = 254/454 (55.95%), Query Frame = 1 Query: 64 DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAA-VTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1239 DG PVG GA KV + +K I +W EA+L S SK + +H+G + T + E ++ A + VM KLL P GGMP+ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL +L + A E +F + NMDQ P+Q EMP +TT++KTG K A I+TGG EK R+T+VLAV DG+KV PRII++G PF R G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH +E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++I+ T+++C K+CGLTL LDGSED Sbjct: 113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSED 565
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 303 bits (777), Expect = 3.750e-94 Identity = 193/473 (40.80%), Postives = 257/473 (54.33%), Query Frame = 1 Query: 7 AYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1239 +Y KL+ + F+R+ C DG PVG GA KV +D++ I W +EA + K K SK +S+H G T EVE + D IN R+ VM KLL P GG+ + E+ F+ +F WY+RF +RH SIRR+TSVGQK P G+EG A+A + KLR++L E A E +F L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T+ LAV DG KV RII+KG PF +T+FGYP G+S GVQ+ SW D + W+++ + RP GS + QR S+LVLDDFR + T V+++ GGLTP+ QPLDR ++KE KR +R RYT ++ ++G K+ P RGLV+TW KE W I+ T++ CFKVCGLTL LDGSED Sbjct: 74 SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN--------------TTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTG-KLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 301 bits (771), Expect = 4.410e-93 Identity = 187/458 (40.83%), Postives = 254/458 (55.46%), Query Frame = 1 Query: 76 VGRRGAGKV-FGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1239 VG +G+ + + +K I +W QE +L S SK + +H+G +A T + E A+VD IN RK VM KLL P GGMP+ +PE+ F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E +F L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV DG+ V P II+KG PF R G+PA G+S GVQ+ SW + + W+ + M RP + S QRP +LVLDDF+CH++E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W+ ++ T+ +CFK+CGLTL LDGSED Sbjct: 77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSG-KLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSED 532
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 298 bits (763), Expect = 2.260e-91 Identity = 195/481 (40.54%), Postives = 259/481 (53.85%), Query Frame = 1 Query: 25 KLEVLKFSRLTCG-DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------RTSFGYPA-----------GGISLGVQ--------------KSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYT----SWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSE 1236 KL ++R C DG PVG GA V + K I +W QE +L S SK + +H+G +A T + E A+VD +N RK VM KLL P GGM + +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E +F L NMDQTP+Q EMP +TT+EKTG K A I+TGGE EK R+T+VLAV DG+KV PRII+KG PF + S + GG V + SW D + + W+ + RP + S QRP +LVLDDF+CH++E F L AKT V+ + GGLT + QPLDR +NK+ KR +R +YT S + D RSG K+ P G+V+TW KE W++I+ +T+ +CFK+CGLTL LDGSE Sbjct: 88 KLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVAD--ARSG-KLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSE 563
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 302 bits (774), Expect = 2.400e-89 Identity = 185/462 (40.04%), Postives = 251/462 (54.33%), Query Frame = 1 Query: 25 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTL 1218 KL+V+ F+R+ C DG P G GA KV + ++ I +W E L A S SK + +H +A ++E A+V+ IN RK+ M KLL P GG+ ++ +PE+ +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E +F L NMDQTP+Q EMP +TT+E TG K A I TGG+ EK R+T+ LAV DG+KV RII+KG PF R+ G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGL P+ QPLDR +NK+ KR +R YT+ RD ++G K+ P RG VATW K W +I+ +++CFK+CGLTL Sbjct: 61 KLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 283 bits (723), Expect = 1.290e-87 Identity = 163/372 (43.82%), Postives = 219/372 (58.87%), Query Frame = 1 Query: 304 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1239 M KLL P GGMP+ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E +F L NMDQTP+Q E+P +TT+EKTG K A I+TGG+ EK R+T+VLAV DG+KV PRII+KG PF R G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++ + T+++CF +CGLTL LDGSED Sbjct: 1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSED 370
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 281 bits (719), Expect = 8.730e-86 Identity = 182/460 (39.57%), Postives = 242/460 (52.61%), Query Frame = 1 Query: 124 IRDWESQEAELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1239 +RD ES A + A K SK + +H G +A T ++E A+V+ IN RK+ VM KLL P GG+ ++ +PE+ F+ +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR +L E A E +F L NMDQTP+Q EMP +TT+EKTG K A I TG EK R+T+ LAV DG KV RII+KG PF R+ G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R YT+ RD ++G K+ P RG VATW K W +I+ T+++CFK+CGLTL LDGSED Sbjct: 31 VRDEESLRANVSANPK---LSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 483
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 268 bits (685), Expect = 1.570e-82 Identity = 163/401 (40.65%), Postives = 218/401 (54.36%), Query Frame = 1 Query: 304 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRS-----------------------------CFKVCGLTLNLDGSED 1239 M KLL P GGM + +P + F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L A E +F L NMDQTP+Q EMP +TT+EKTG K A I+TGG+ EK R+T+VLAV DG+KV PRII+KG PF R +PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E + L A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++I+ T+ S CFK+CGLTL LDGSED Sbjct: 1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSED 399
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 271 bits (693), Expect = 4.380e-78 Identity = 191/517 (36.94%), Postives = 246/517 (47.58%), Query Frame = 1 Query: 25 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARY----------------------------------------------------TSWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1239 KL +F+R+ C DG PVG GA KV G+D++ + W +EA + K K SK +S+H G T EVE + D IN A + ++A F+ +F WY+ F +RH FSIRR+TSVGQK P G+EG A+A + KLR++L E A E +F L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T LAV DG KV RII+KG PF RT FGYP G+ VQ+ SWCD + W+++ + RP GS + QR S+LVLDDFRCHR E F K L T V+++ GGLTP+ QPLDR +NKE KR +R S I D ++G K+ P RGLV+T KE W I+ T++ CFKVCGLTL LDGSED Sbjct: 4 KLTAAEFTRVLCEDGQPVGNSGAAKVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCIN----EQLAASAGEILA------------------------FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADP--KTG-KLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSED 487
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 259 bits (662), Expect = 1.120e-76 Identity = 181/510 (35.49%), Postives = 246/510 (48.24%), Query Frame = 1 Query: 25 KLEVLKFSRLTCG-DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAIFALLYNMDQTPIQAEMP---PDTTVEKTGTKSACITTGGETEKLRYTV------------------------VLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSW-----CDGTQS-----------------------------------------DEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1239 KL ++R C DG PVG GA K+ + K I +W QE +L S SK + + +G +A T + E A+VD IN RK V +KLL P GGMP+ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AW + KLR +L + A E +Y Q P E P D T E+ + A + T R + VLAV DG+KV PRII+KG PF R G+PA G+S GVQ+ SW C+G ++ + W + RP + S QRP +LVLDDFRCH++E F L T+V+ + GGLTP+ PLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++I+ T+++CFK+CGLTL LDGSED Sbjct: 41 KLNAAVYTREICPYDGQPVGNNGAAKLLQVPGKRIIEWLKQEEQLREKVSANPKLSKAKQVQSGGKASTVDTEQALVDYINEQRKQHRGCGNREVTSKLLELKPDALGGMPANTKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWTTVMKLRETLVKRAGE-----IYARRQPPAPDESPIKGEDLTSEQLVSVEAEDSRNSATWIRRQSSTRCRWRPLWRRPVRRMLASAQEERVLAVMADGKKVSPRIIFKGMPFIPPTVSGKGESILPRTNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGARASWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVVSTWCKEAWESTPETXRPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSED 544 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig102.50.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig102.50.3 >prot_P-littoralis_Contig102.50.3 ID=prot_P-littoralis_Contig102.50.3|Name=mRNA_P-littoralis_Contig102.50.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=413bp RCAYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAback to top mRNA from alignment at P-littoralis_Contig102:265715..267672- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig102.50.3 ID=mRNA_P-littoralis_Contig102.50.3|Name=mRNA_P-littoralis_Contig102.50.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=1958bp|location=Sequence derived from alignment at P-littoralis_Contig102:265715..267672- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig102:265715..267672- >mRNA_P-littoralis_Contig102.50.3 ID=mRNA_P-littoralis_Contig102.50.3|Name=mRNA_P-littoralis_Contig102.50.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1239bp|location=Sequence derived from alignment at P-littoralis_Contig102:265715..267672- (Pylaiella littoralis U1_48)back to top |