Homology
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
D7G4U2_ECTSI (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U2_ECTSI)
HSP 1 Score: 283 bits (723), Expect = 1.640e-85
Identity = 154/206 (74.76%), Postives = 171/206 (83.01%), Query Frame = 2
Query: 734 AISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTDAALAEKLQNLERALEDADARNAAAKGQGRSVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDEGPIPTKM 1351
A+SDYM Q+NRPYSYINVFDNLRKKIPKAMVQKLLDELVRD LK+QE+GKARIYYANQDALP GAG+AS + M+ LDQEAKTLTS E +K+ E Q+++RAS LS QPTD L +KL N + LE A+ARN AAKGQGRSV GGMK AK +FNKFRA+WV RKRNAMDVVDMIADGMEKKPKVV EMLGVE DE PIP KM
Sbjct: 117 AVSDYMLQSNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLKLQEYGKARIYYANQDALPNGAGDASADKMRTLDQEAKTLTSQLEIVSKQ---EQQTRARASSLSCQPTDDELTKKLANCAQELEQAEARNGAAKGQGRSVAAGGMKTAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVMEMLGVEPDEDPIPPKM 319
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
A0A6H5JRD1_9PHAE (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD1_9PHAE)
HSP 1 Score: 283 bits (725), Expect = 2.720e-84
Identity = 155/206 (75.24%), Postives = 172/206 (83.50%), Query Frame = 2
Query: 734 AISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTDAALAEKLQNLERALEDADARNAAAKGQGRSVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDEGPIPTKM 1351
A+SDYM Q+NRPYSYINVFDNLRKKIPKAMVQKLLDELVRD LK+QE+GKARIYYANQDALP GAG+AS + M+ LDQEAKTLTS E +K+ E Q+++R S LS QPTD LA+KL N + LE A+ARN AAKGQGRSV GGMKAAK +FNKFRA+WV RKRNAMDVVDMIADGMEKKPKVV EMLGVE DE PIP KM
Sbjct: 230 AVSDYMLQSNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLKLQEYGKARIYYANQDALPNGAGDASADKMRTLDQEAKTLTSQLEIVSKQ---EQQTRARVSSLSCQPTDDELAKKLANSAQELEQAEARNGAAKGQGRSVAAGGMKAAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVMEMLGVEPDEEPIPPKM 432
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
A0A836CJ02_9STRA (Tat binding protein 1-interacting protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ02_9STRA)
HSP 1 Score: 144 bits (362), Expect = 7.850e-34
Identity = 90/208 (43.27%), Postives = 126/208 (60.58%), Query Frame = 2
Query: 734 AISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTDAALAEKLQNLERALEDADARNAAAKG-QGRSVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELD-EGPIPTKM 1351
A+ DYM+Q NRPYS +N+FDNL +KIP+ MVQK+LD+LV+ +L +E+GKA IYY NQ L G +Q L E K L++ + L++QP D AL E+L L+ A + D R A +G QG +P M A+++FNK R +WV+RK A + VD I+DGMEKKPKVV +++GV+ D + +P KM
Sbjct: 156 AVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGE-----LQALAAEEKDLSAQXXXXXXXXXXXXSDNAA---LAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVVPPKM 355
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
A0A225V1S8_9STRA (Pairing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V1S8_9STRA)
HSP 1 Score: 120 bits (302), Expect = 2.580e-27
Identity = 86/205 (41.95%), Postives = 116/205 (56.59%), Query Frame = 2
Query: 734 AISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRL--DQEAKTLTSHFETAAKEA-SAEHQSKSRASYLSSQPTDAALA---EKLQNLERALEDADARNAAAKGQGRSVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDE 1330
A+ DYM++ NRPYS +NVF+N+ + I K + LLD L +L + +GKA+IYY NQ LP P +RL +++ K +T+ + +E SAE S S LS DAAL E+ LE+ +E D A V PG +A K F K+R WV+RKR AMD V+ IADGMEKKPK V +++GVE DE
Sbjct: 21 AVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTTLLDNLTAKEELVSKTYGKAKIYYMNQSNLPV------PSEAERLALEEQIKVVTADCVASEQELKSAEATLASIKSQLSDADLDAALKQLDEEAATLEKKMETLDQPGRA------PVSPGRKEALKRKFTKYRTAWVSRKRIAMDGVNQIADGMEKKPKAVLDLVGVETDE 213
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
A0A024U6Z6_9STRA (Homologous-pairing protein 2 homolog n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6Z6_9STRA)
HSP 1 Score: 123 bits (309), Expect = 3.190e-27
Identity = 80/205 (39.02%), Postives = 119/205 (58.05%), Query Frame = 2
Query: 737 ISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTDAALAEKLQNLERA-------LEDADARNAAAKGQGRSVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDE 1330
++ YM+Q NRPYS +NVF+NL ++I K M+QK+LD LV ++ V+ +GK++IYY NQ LP+ SPE + ++ + + + KE +H++ L+SQ +DA L+ L++LE L++ D R + V+PG A +F K+R WV RKR MD +D IADGMEKK K V ++ GVE DE
Sbjct: 122 VAKYMRQTNRPYSVLNVFENLHRRIGKTMLQKILDVLVEKGEINVKTYGKSQIYYYNQAKLPR----PSPEALAHIEDQITAASDEVASLEKELK-DHEAILHG--LNSQLSDAELSVTLESLEAQNATLQAKLQEMDKRPSVV------VDPGAKAALTKSFTKYRTEWVKRKRIVMDAIDQIADGMEKKRKDVLDLCGVETDE 313
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
A0A329RFD1_9STRA (TBPIP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RFD1_9STRA)
HSP 1 Score: 121 bits (303), Expect = 1.820e-26
Identity = 81/200 (40.50%), Postives = 117/200 (58.50%), Query Frame = 2
Query: 734 AISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTDAALAEKLQNLERALEDADARNAAAKGQGR-SVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDE 1330
A+ DYM++ NRPYS +NVF+N+ + I K + KLLD LV +L + +GKA+IYY NQ+ LP S E ++++ KT+TS + +E + +++ S ++SQ +DA L L+ LE + + GR V PG A K F K+R WV RKR AMD V+ IADGMEKK K V +++G+E DE
Sbjct: 118 AVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNLPV----PSEEERLAIEEQIKTVTSECTASEQELKS---AEATLSGITSQISDADLDAALKQLEEEAATLETKVETLDQPGRVPVSPGRKDALKRKFTKYRTAWVARKRIAMDGVNQIADGMEKKTKAVLDLVGMETDE 310
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
D0NIU5_PHYIT (Pairing protein 2 family protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NIU5_PHYIT)
HSP 1 Score: 120 bits (302), Expect = 2.130e-26
Identity = 81/200 (40.50%), Postives = 116/200 (58.00%), Query Frame = 2
Query: 734 AISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTDAALAEKLQNLERALEDADARNAAAKGQGRS-VEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDE 1330
A+ DYM++ NRPYS +NVF+N+ + I K + K LD LV +L + +GKA+IYY NQ+ LP S E ++++ KT+T+ + +E + +++ S +SSQ +DA L LE + + GR+ V PG A K F K+R WV RKR AMD V+ IADGMEKKPK V +++GVE DE
Sbjct: 111 AVLDYMRKTNRPYSLLNVFENMHRVIAKPSLTKPLDNLVVKEELASKTYGKAKIYYLNQNNLPV----PSEEERLAIEEQIKTVTAECTASEQELKS---AETTLSGISSQISDADFDAALNQLEDEAAALETKVETLDQPGRAPVSPGRKNALKRKFTKYRTAWVQRKRIAMDGVNQIADGMEKKPKAVLDLVGVETDE 303
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
A0A6A3DU84_9STRA (TBPIP domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DU84_9STRA)
HSP 1 Score: 121 bits (303), Expect = 2.320e-26
Identity = 85/202 (42.08%), Postives = 113/202 (55.94%), Query Frame = 2
Query: 734 AISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEA-SAEHQSKSRASYLSSQPTDAALA---EKLQNLERALEDADARNAAAKGQGRSVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELD 1327
A+ DYM++ NRPYS +NVF+N+ + I K + KLLD LV +L + +GKA+IYY NQ LP S E L+++ K +T+ + +E SAE S +S DAAL E+ LE+ +E D A V PG A K F K+R WV RKR AMD V+ IADGMEKKPK V +++GVE D
Sbjct: 130 AVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQSNLPV----PSEEERLALEEQIKVVTADCAASEQELKSAEATLAGITSQISDADLDAALKQLDEEAAELEKKVETLDQPGRA------PVSPGRKNALKRKFTKYRTAWVARKRIAMDGVNQIADGMEKKPKAVIDLVGVETD 321
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
A0A6G0XWT6_9STRA (Homologous-pairing protein 2 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWT6_9STRA)
HSP 1 Score: 119 bits (298), Expect = 7.200e-26
Identity = 79/205 (38.54%), Postives = 117/205 (57.07%), Query Frame = 2
Query: 737 ISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTDAALAEKLQNLERA-------LEDADARNAAAKGQGRSVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDE 1330
++ Y++Q NRPYS +NVF+NL ++I K M+QK+LD LV ++ V+ +GK++IYY NQ LP S E++ + + +T+ FE + + ++ + L+SQ +DA L L +LE L+ A+ RN A V+PG +F K+R W+ RKR MD VD IA+GMEKK K V E+ GVE DE
Sbjct: 112 VAKYLRQTNRPYSVLNVFENLHRRIGKTMLQKILDVLVEQGEINVKTYGKSQIYYYNQRKLPA----PSAELLAKTEDSIQTV---FEEVSALEKTLKEKEAVLNGLTSQMSDAELTAALADLENEASSLSAKLQQANERNTA------PVDPGAKAHLTKSFQKYRTEWLKRKRIVMDAVDQIAEGMEKKRKDVMELCGVESDE 303
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Match:
A0A6A4YZN9_9STRA (Homologous-pairing protein 2 homolog n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZN9_9STRA)
HSP 1 Score: 116 bits (291), Expect = 8.090e-25
Identity = 79/205 (38.54%), Postives = 119/205 (58.05%), Query Frame = 2
Query: 737 ISDYMQQANRPYSYINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPKGAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTDAALAEKLQNLERA-------LEDADARNAAAKGQGRSVEPGGMKAAKSNFNKFRAMWVNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDE 1330
++ Y++Q NRPYS +NVF+NL ++I K ++QK+LD L ++ V+ +GK++IYY NQ LP+ S + + + + +T+ E AA E +A+ Q ++ L+SQ +DA L L+ LE L+ D + A V+PG +A +F K+R WV RKR MD +D IADGMEKK K V ++ GVE DE
Sbjct: 126 VAKYLRQTNRPYSVLNVFENLHRRIGKTILQKILDALAERGEINVKTYGKSQIYYYNQSKLPR----PSADSLAQTEDHIRTVLD--EVAALEKAAKDQ-EAILQGLTSQMSDADLDLALETLETQNHLLQVKLQQVDKQPVVA------VDPGAKEALTKSFTKYRTEWVKRKRIVMDAIDQIADGMEKKRKDVLDLCGVESDE 317
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig102.114.3 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.64e-85 / Id = 74.76 Expect = 2.72e-84 / Id = 75.24 Expect = 7.85e-34 / Id = 43.27 Expect = 2.58e-27 / Id = 41.95 Expect = 3.19e-27 / Id = 39.02 Expect = 1.82e-26 / Id = 40.50 Expect = 2.13e-26 / Id = 40.50 Expect = 2.32e-26 / Id = 42.08 Expect = 7.20e-26 / Id = 38.54 Expect = 8.09e-25 / Id = 38.54 Sequence D7G4U2_ECTSI A0A6H5JRD1_9PHAE A0A836CJ02_9STRA A0A225V1S8_9STRA A0A024U6Z6_9STRA A0A329RFD1_9STRA D0NIU5_PHYIT A0A6A3DU84_9STRA A0A6G0XWT6_9STRA A0A6A4YZN9_9STRA
Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1
Start 1
Seed ortholog 2880.D7G4U2
Preferred name PSMC3IP
PFAMs TBPIP
Model size 2301
Max annot lvl 2759|Eukaryota
KEGG ko ko:K06695
Hectar predicted targeting category other localisation
GOs GO:0000003,GO:0000228,GO:0000280,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006310,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007129,GO:0007131,GO:0008134,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0019219,GO:0019222,GO:0019904,GO:0022402,GO:0022414,GO:0022607,GO:0030331,GO:0030374,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0034641,GO:0035257,GO:0035258,GO:0035259,GO:0035825,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045132,GO:0045143,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046966,GO:0046983,GO:0048285,GO:0048518,GO:0048522,GO:0050681,GO:0050692,GO:0050789,GO:0050794,GO:0051026,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0051321,GO:0051427,GO:0060255,GO:0061982,GO:0065007,GO:0070013,GO:0070192,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0098813,GO:0140013,GO:0140110,GO:1901360,GO:1901363,GO:1902680,GO:1903046,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons 9
Evalue 1.16e-89
EggNOG OGs KOG4603@1|root,KOG4603@2759|Eukaryota
Ec32 ortholog description TBPIP domain containing protein
Ec32 ortholog Ec-20_000330.1
Description homologous recombination
Cds size 1329
COG category S
BRITE ko00000,ko03051
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789360.4855995-UTR-P-littoralis_Contig102:545529..545554 1680789360.4855995-UTR-P-littoralis_Contig102:545529..545554 Pylaiella littoralis U1_48 UTR P-littoralis_Contig102 545530..545554 +
1680789360.6020286-UTR-P-littoralis_Contig102:563048..563995 1680789360.6020286-UTR-P-littoralis_Contig102:563048..563995 Pylaiella littoralis U1_48 UTR P-littoralis_Contig102 563049..563995 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789360.4952672-CDS-P-littoralis_Contig102:545554..545677 1680789360.4952672-CDS-P-littoralis_Contig102:545554..545677 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 545555..545677 +
1680789360.5082128-CDS-P-littoralis_Contig102:547032..547614 1680789360.5082128-CDS-P-littoralis_Contig102:547032..547614 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 547033..547614 +
1680789360.5164351-CDS-P-littoralis_Contig102:549331..549419 1680789360.5164351-CDS-P-littoralis_Contig102:549331..549419 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 549332..549419 +
1680789360.5281498-CDS-P-littoralis_Contig102:551109..551201 1680789360.5281498-CDS-P-littoralis_Contig102:551109..551201 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 551110..551201 +
1680789360.5434818-CDS-P-littoralis_Contig102:553279..553393 1680789360.5434818-CDS-P-littoralis_Contig102:553279..553393 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 553280..553393 +
1680789360.5527368-CDS-P-littoralis_Contig102:554170..554272 1680789360.5527368-CDS-P-littoralis_Contig102:554170..554272 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 554171..554272 +
1680789360.5608664-CDS-P-littoralis_Contig102:556111..556194 1680789360.5608664-CDS-P-littoralis_Contig102:556111..556194 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 556112..556194 +
1680789360.5724769-CDS-P-littoralis_Contig102:558279..558373 1680789360.5724769-CDS-P-littoralis_Contig102:558279..558373 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 558280..558373 +
1680789360.5878887-CDS-P-littoralis_Contig102:562997..563048 1680789360.5878887-CDS-P-littoralis_Contig102:562997..563048 Pylaiella littoralis U1_48 CDS P-littoralis_Contig102 562998..563048 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig102.114.3
>prot_P-littoralis_Contig102.114.3 ID=prot_P-littoralis_Contig102.114.3|Name=mRNA_P-littoralis_Contig102.114.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=443bp
MAGGDGSSEEFVEDDSGGEVEEEEEEEEGDSSASFASEDDEGDEDDGEDN GDDSDVFETPIKARKRSRTPSSEQRPAPASASLSGKKKRKASSTPAAVSD RGSVSSSSSGSGSDSKKSVGASPGAAAAVAAATNKKATPSGGKGKSTAAA AAGGGSKNDEPPSQASSSSSLSSPGRGSQATPGAGGAGGGGKAAGARDPA KSTFGGVGRGSAAGKKPAAAAKGAGSGGAAAKTPKAAISDYMQQANRPYS YINVFDNLRKKIPKAMVQKLLDELVRDAKLKVQEFGKARIYYANQDALPK GAGNASPEMMQRLDQEAKTLTSHFETAAKEASAEHQSKSRASYLSSQPTD AALAEKLQNLERALEDADARNAAAKGQGRSVEPGGMKAAKSNFNKFRAMW VNRKRNAMDVVDMIADGMEKKPKVVTEMLGVELDEGPIPTKM* back to top mRNA from alignment at P-littoralis_Contig102:545530..563995+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig102.114.3 ID=mRNA_P-littoralis_Contig102.114.3|Name=mRNA_P-littoralis_Contig102.114.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=18466bp|location=Sequence derived from alignment at P-littoralis_Contig102:545530..563995+ (Pylaiella littoralis U1_48)CAGGCAGGCAGAAAGGCAGAAAGGC ATGGCAGGAGGAGATGGTTCCTCGG
AGGAGTTTGTAGAGGATGATTCAGGTGGAGAGGTGGAGGAAGAAGAGGAG
GAGGAGGAGGGTGATTCTTCGGCTTCGTTCGCATCAGAAGACGACGAG GT
GATCCAACAGAGAGATCAAACGAAAAAGAGAGAGGGAGACAGAGTAATTT
ACAGCAGCAGCAGCAGCACTATCACACTCTGTTGACTATTTACTTCAAGT
TCGAATTACAGCAGTTTAGAGTGCATCAATTGAGCACCTTCGGTTTCACG
ATGGGATTTCAACCAGCACACAGAAGTCAATCACTGCTCCTGCTGCTGTG
TGAGTGCGTGCAGATATCACGAAGATCAGTACAGCAGTAGTGTGTTTGAC
TCTGTGTATCCCATGCGCGCTTCATTCATCCCTCAAACATGAGGTAGGGA
GGATGCCGCCAGGCGCCCAAAAAGCAGGAACGAAGAGAGCGCGGAGATCT
ACCGTAGGTCGGCATTCCTCTTACATGTCATAGCCCGCCATCACAGGGTA
CCGGTGTGTCCGTCTCGATGAGTGGCGCCGTGCGATTCCAACCTTCTTAC
TGTACAAGTATGCAGAGCGTCATGCGCACATGGCATTGGATTGACACCGC
ATTACGGTGCACGAGGCGCCCGCTGCTGGACAGCAGTATGGTATGGTACG
TCGTATCATATGTCTGGAGTAGGTCGTTCCAGGATGCAATGCTGCTGAAA
TACCGGTAGTTACTTCGGAGTATAAGAGAGGACAGACATCACTGCTGCTT
GCATTTTCGTACATTTTATTCTATCATATCATATGTTTCCGCGAAAACAG
ATGAACAACCGTTGCATCCACAACGCGTGGTGCGCCGACACACAGCTGGC
AGTACAAGCAAAGCAGAACGTGGGATGCATGCACCAAACTGGGTACGGTA
GGGCACACAAGCCACCACGCAGGACCCCCTCGAGCGATTTCTAGAAGTCC
AAGGAGAATTTTCCGAAACCGTACGTGCTGTATGTACACAGCAGTACCCG
GTGCAGAAAATCGTTTCATCCTGGCAGGTGGGCACCCTGTTCGCTGTGTA
GTGTGGAGTGCACAGGAGGCTCCGTGATTGGAAAGCAACTATATAAACAG
GAGCGTGGCTGGAAAGAGCTACGCCAAGGCGCGCCAAGCAATAGAGCAAA
TGACCGTCGCACTCAACGACTATCACACTCTTGCGCAGTTTTAGCTCCTC
CCCTGCGACGTCAACTCGCAGCTCGGGGCTCCCTCTGCACGTACGGTAAC
GTGCTAAAAGTTACTTTTCCTGGGGGAGGGGGGCGTCCTGCCGAGCTCCG
TATCCTGATTCAACACTCTGTGCATGCATCTGTCAAAAATGTTTGTAGCG
CTTCAAATCACATTCTGGCGCTTGGCACGCCCTTCCCTTTCGGCGTTTCG
ATACTTGAGCCACCATCACCTTCGTCGTCGTCATGATCTTGATTGTCTGT
CAGGGCGACGAGGATGACGGCGAGGACAACGGGGACGACAGCGATGTCTT
CGAAACCCCCATCAAGGCGAGAAAACGCTCAAGGACTCCGAGCTCGGAGC
AGCGGCCCGCCCCGGCATCGGCATCTCTCAGCGGGAAGAAGAAAAGAAAA
GCCTCCTCCACTCCCGCGGCCGTTTCGGACAGAGGCAGCGTCAGCAGTAG
CAGTAGCGGCAGCGGTAGCGATAGCAAAAAAAGTGTCGGGGCATCACCCG
GCGCGGCGGCGGCGGTTGCGGCAGCAACAAACAAGAAAGCTACCCCGTCG
GGGGGGAAGGGGAAATCGACAGCGGCGGCGGCGGCAGGAGGAGGAAGCAA
GAACGATGAGCCACCTTCGCAGGCTTCATCCTCGTCGTCGCTGTCGTCAC
CAGGGCGTGGAAGTCAAGCGACCCCGGGAGCAGGAGGCGCAGGCGGCGGC
GGGAAGGCCGCTGGCGCACGAGATCCGGCCAAATCGACCTTCGGTGGTGT
CGGGCGGGGCTCGGCGGCTGGGAAGAAACCGGCAGCAGCAGCCAAAGGAG
CTGGGTCGGGAGGCGCCGCTGCAAAGACCCCCAAG GTGATGCTTACAGCG
ACAGGTTTCATTGCGGTAGATCGCAAAATATACCACAGGACCCCCTTTAA
CCCCCAGCAGAGAGAGTGTCCGTCAATGCTGCACCGGAAAGGTGTTGGAA
CTTACCATTTCGTCGAGAGAGAAGTTTCCGAGAACCAAGAGTATTTTAAC
ACACCGTTTGATGTTGGCATGGATCATGTCCTCTTTTTTCGTAGTTACGT
AATCAGGTAAGTTAAAAAATCGGTCCATGGGGTCCAGTGGTATGTTGTGC
GGCGTACGGCAAGAGTTCCCTGATACTTGGTACATATGCCCAAACTGTTG
TTTACTGCCTCTGTTGTACTTTTACGTACATGCATGAAGTTGGTTTAGTA
TTTTCTGGGAAGTACAATCGAACGAGCTTTCTTTTCCGTTCCGGCTTTCG
TATGTGTGTCGTACAAGACTCGGCTGGCCGCATGTGTCTGGCGGGTTATT
TAATGCTCAACGCTGGTTAAACACACAAATACGTTGCTTAATTGGCGAAG
CTGTTAAATCCACAACGAAACATCGTCTGATGCAGCAGAAAACCAGTTAA
TGCACAAAATTGCAAGACTGTTGCTTTGCTCACAACAATGCTGTTTAATG
CACAAACTGATGTTTCAGGGATGATACAAAAGCGGCTTGGCGTCGACGTT
TTGTTTGTGCCGTTGGCGGTATCTGAAGTCGACAAACATTAGCTATGTAT
CCGTTTCAACGTTGGCAATTTCACGTCGACGGTATTTAGCGTGGACGGTG
TCAAGTTGACGGTGTCAAGTTGATTCGCAGTGACCATCTTTCATGTTGAC
GGATTCACGTCGGTTAGGGCACGCCACCGCCGTTACGTCCGATCTCAAAC
TCGGTTTGACCGACCGTAAGCGCTGTAGATGTGGGGAGGGAAAGGATTCC
GTGACCACCAAACTGGCAAGAAGCGAGCAGCCGGGTAGCTGGGCGAGGTG
GGGCAACGGTGCAGTGAGATACACCTGCACGTGCTTGTTTGCTTGATCTT
TGACAGATTATTGAAGTGGTCACTTCAATCATGCTGCGTGTATTATGCCA
CGGCATTTGTGGAGTATCTATGTCGCAAATCATGCACCTCTTCTACCTGG
CTTGTGTCAAATCTCTCCATCTCTCGCTCTCCCTCTCTCTTCCTTTGTGA
CTCTGCCGGCGACCGTTCTTGAACTTGACATTGTGTGTGTATGTGTGAGT
GGGAGTGGGAGTGGGTGTGGGTGTGTGTGTGTGTGAATGTTGTGTGTTCC
GTCTATTCCGGACGCCAGTGTACACCTTTCGGTACTTGCTGGGCGTAATT
GCTGGGGTTGGTCACACGTGAGGAAGATAATCACAATCTAGACATTTGCT
TTTCACGATCATCATGTTATCGGGTGCCGTGACATGTCTCTTGCAGTGGT
TCTTGTCCTTGATCTTGATACCACACCACTTCACATGGCGGCAGACGTGT
GATCTACAAAGCGCTGACGTTTCCGTGATGTCTCTGATCTCGTCTGGCGT
TCCTACAAGCATCAGAGGAGTCATTGTTGGTGTTTTTGGTGAAAGCCTGT
TTCTCGAGCTTGATTCGTGATATCACACGAACGTACCGCGGCAAACGTGA
CACCTCTATACGTCGATGGTTTATCTTTGAATGCTCATCTTCTGTCGATT
ACTAAACAGCAGTACTTCAAATGTTTTTTGTTGACGTTTTGCGGACGACC
AGGCAGCAATCTCCGACTACATGCAACAAGCCAACCGGCCTTACAGCTAC
ATCAACGTCTTCGACAACCTCCGCAAGAAGATTCCCAAGG GTAAGTGGGC
GAAGAGAGGCTTACGAAAGAATGGATGGGAACAAGAATCGAGGTTAGGCG
ATGTTCACCAAGCGCAGTGGTCGCGGTGGAAACGCCGTAGAACAGACAGG
CGTAATCCAACGCGAAACGGGGGAGGTGAAGGTCGGTGCCGGAAAGAAGG
CGTAGAAGTCATGGAACCATATCGTCGAGCGAGAGAGAGAAAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGAAGAGAGAGTTTTACA
CAAACAAATCGTACAGTATATATCTCTTGGTGTTGGACTAAAACCCCTTC
GCTCGATGCCGACCTGTGAGGGTCGGCACAGGGGGTTCCGTGGGGGCTCC
GTGAGGGTATTTGTGAGGGGCCCCGGGACGGGCTTCCGTCTGAAATCGTG
TTCGTCTACGATTTATTTACTTCGAAGCATGTGATACGTGTCGCTTTGTT
TGCGGGGTAGTCGAGCGCTTGAAGACTGGTGAATGTCGGGTTGCTGTGTG
TCGTGCCATGTGCAACCTACGATAACCCATATGATACCAGGTATTGTCTG
CGCTTCTTTATTTTGTTGATTTGTCCCTCGCACAATCAACTCCTTCAAAT
GCCATGCACATCCGCAGTATTATCGGTGTCCGTAGTGTTCCCAAAACAGT
TGCGAACTCTTCCCCTGGTGGTTTGACCAATCAACACCCCACGCCCACAC
TCTCTCCAATGGTGCCTCCTTCAAGTAAGGAAGGAGATGAGACAGGCAAT
TTTGTGTTTTGTAACACGTGTCAATGAGAAAAAATGTCAAGGAAGATGAG
GATGGTGATATTTTGTTTCTCTGAAAATATGGCCACAAGGTAACCTCTTT
TGCAAAACAACTTGAACAAAATTGTTTTGCAAGATGTGGCAATAGAGGGA
AATATTTTGCAAGGCATGGCGGTTTTGTAGTCGTATTTTGTACATACGAT
ATTTAAGATGAGATATGTCTCTGTGGTTTGGTGTGGCGATGACTCTAAAA
GCAGCAGGTAAACGGTGCTTTGTCTCGAAAGAGATGGATTCGTGCCCAAT
CGTTCCATGATTTATGAAACGTCTCGAAAGGGATGGATACATGACCAATC
GTTCCATGATTCATGAAACGTCTCGAAAGAGATGGATTAACGTGCCCAAT
CGTTCCATGATTTATGAAACGTCTCGAAAGGGATGGATACATGATCAATC
GTTCCATGATTTATGAAGCGTCTCGAAAGGGATGGAGTAACGAAGCCTAC
CGTTCCGTGATTTGTAGAGGCAAGCAACAAGTGACGTACGCCCCCCCCAC
AATACTAATTATTTACTTCGAAGTACTCTTATGATATACGCAGTAGTCAA
ATATAAAGCATGGTAGAAATCGAATGCCGCTCGTCCCTCCACCGGTCTGT
CTGTGTGGTCGAAGTCAAGACTACCCATTCGACTCACGAGGACCCCCCGC
ATCCCTTGTCACCCGTTGAGTACAACCCCCCCCCCCTCTCACCAATCGAG
TACCCCCCGCTACCCCTCCCACACTTGCGTTTTGGTATTCTCGGTGCTGG
TGTGGCGATTTCGTCGGGTTGGTTTTGGTGCACGGCTCGTTGGTTCGTTT
GTTGCTGCGCGATAATACACAACGACGACGACGACGACGACGACGATCGC
GGCGTGAAACGAATTGCTAATCATTCGCAGCAATGGTGCAGAAGCTATTG
GATGAGCTGGTGCGGGATGCCAAGCTGAAAGTGCAAGAGTTCGGCAAGGC
CAGGATCTACTACGCCAATCAG GTGCATACGGCATTCATTACTACTGTCA
TTTTCAACGACCCTCTTCTTATTTTTGACAACCAGCAATGATCGACATTT
TATTTTGTATGTAGTTTTCTCGGGTTCACGATCAACAAACGAAAGAGACC
AATTCTTATTGTTTTGTTGTCAACATGTTTTTTACTTTATTTCAAGTTCG
CGACGAACAATCCATGCAGACCCACTTTTTTTCTAGGCCAGCGCGATGTG
GTACAGCAGCCACTCAAATTTCCACGCCAATAAGTATTCCCGTGTTTTTT
TCTTCTTGGTTGTTCCTCTCTCCTAAAGATAGTCTTCTCCGGGGATGGCC
AAACGCTACGCGCCGATCAATATTTTTGTCGTGCTCGGACGTTGTCATTG
TTGTTATCCTTGTCGTTGTTGTTGGTGTTTTTGTTGTTGGTGGTGGTGGT
GGTGTTGGTGGTGTTGTTGTATTGTGGGTTGTTGCTTGTCATATCTACAA
TACGCCAGACATATCCAAGTCTAAAGGAGAGACGAGTACACTTCGATTTT
TCGCAAGAAAAAGGAAAAATGGCACCTACGACTGCTGTACTGACTTGGTT
TTGCACGTGTGGCATTTTTCGGACTGTTCCGAGGCGAACTCAATCCGTTT
CTATTACCACTCGATGGCAAGTTGTCTGCATTTAAAACGTACTTGTTTGT
CGGGGGTGTGCTATCCTTTCGACCATCGATACCACGAGTTTTTTTTTTTG
TTCTTTCAATTGTTTACAGCAGTGTTACTTGTTTTCATCGTTTTTCCTGT
AAACATGGAATGACAACGATGATTGTGACGGTCGTCATCGCACATTGTTT
TGTGAGTGTTGCGTTCCTTTCGAACGTCGATGTCTGATATTCTTTCAAAC
TTCGATTCCGACGTTCTTTCAAATGTCGATGTTATCTACCGGTTATTTAA
AAAAAAACTTAGTATTTCGTAATCCCTTGGTACGAAACGTTGCTCTCGTG
AATCATCATGTGTCTTAATGTATGTAGTCGTATCGAATGGAATCCGATGG
CACGCATCATCACATGCTTGTTCAAAGTTAAAAAAGTGTGGGTCATGTTC
TTTTAGACCGTTGGATATCACGAGTTTTATTATCCCGTGCCCTGTGTTGC
AAGTGCTTCCTCGTGCTTGTCACGGCGTTTTCTTCGTCTGCATACCTACC
TGTGTAATGCATTTACCTGGTTTGTGTCGATTCTTCTTTTTTACTAATTT
GTTGTTTTAATTGCACACTATATTCTTAATTTGATTGTGATTTTGTTATT
TTTTTGGCACATTGGTCGTCGGTAATTTTTTTCCTTCAATACGAATAATT
TTGTACGAAGGATACCCGGAAACGGGCTGGAGGAGCCCTGCGGACTTCCG
ATGAACGCCTGATTATTCATTCAAAATTTCCAAACTCTTGTCTTTTCAGT
ACGAATCAGCCATCGCCAAATGATCCCAGATTCGGTCGCTGTGACCGATA
ACTGGTGTGTTGGATCAAAGTGCTTCCGACAAATTACTGATAACTCAATT
TTGATTTTTGAAACGGGCTCTCCTTCATCGAGTTCCGTGAGCTGCGAGTC
GTTGTTCGAACGCTGCCGCAAAAATGTTTGAACGCTTCCAACAGATAAGT
AGCATCCAGAAAAGGAGAGCATACAGTGTGCGTGCACGCGACCGCTCTTT
CAGAAGTACAATTCTCTCCGCACATACCCCATGATACCCATTGCCGTGAT
TGATCCAAAGGCGGCAGGCACTGCACATGCCCTGCTTTATCGGGTGCTGT
GTGCTGAGAGCGTAATAAGATTGGCTGCTATCATACAGCAGAGCGACCTC
ATCACGCTTGGTAGCTCACAGAACTCGATGGAGTTGGGTTCTTTTCCTGG
GAGCTTCTGCGATAGTAATTCGTGTGAGAGACATGGTTTGGAAACCCATA
CTCTGTAATACGCAGGCGTTTTTCGAAATACGCAGAGCTTCTCCAGTCCC
TTCCCAGGAGTCCTTGAGTGCTTGGCATGGCGATCGTACGTCGTTCATAC
CTGGAAATCAACTCCGTTTCTTTCTCTGTTGTTTTTTTTGCTCTCATCAG
GACGCCCTGCCGAAGGGAGCCGGCAACGCTTCTCCAGAAATGATGCAGAG
ACTGGACCAGGAGGCCAAGACGCTGACCTCCCACTTCGAGACCGCGGCCA
AGGAGGCGAGTGCA GTGAAACTTGTCTCCGGTATGAGTCGGTTGATTTAC
GAGTTTTCCTTTATTTTTTCGCAGCTCACGACGGACGCGACGATCGCGAA
GTGCGGTCAATAAAAATTGTTGCGCTGAGTATATTGCTGTGGAACCCGCG
ATAGCGGAGGATACAGCACGTGAAATGGTCAGAAGCGCGTTCGTTGGCGC
GTTCAGAACGAACGGTCGGTGTTGTTTGTTGGCTATTTGAGACCGCCGAG
TTCCGGCAGGAGGTGGCCCGCGAAAAGTTTAGTCTCAAAGTTGAACTGAC
TCTTTTTTCCTCCTGTTTTTGTAATTATTTTAACTGGGCATTCACGACCA
CTCGACCGGAATTTCGAACATTCTTTTGATCCGGTGCGAATGCGACTTGT
GCTGGCCACCCCGAAATTTTGCAATCATTCGGGCGACGAGCTTTTACTCC
TGTTGTTGTGGGGAAGACCTTGAAAAATATATCAGTCCCCCGTCAGTCCC
TTCCCTCCCCTTCGTGTCCTGTAGTTTTTTTTCACAAGCAGTAGCAGTAG
CATCAGCAGCAGCACACAGCCGAGAAAGAAGGTTCGCCTGCCCATGCCTC
TATCTCTTGCGCTGTTGGTGTTGTCAAAAGCGACACATCGAATTTGAGGT
GAATTTATCGGACCCCCCGCCCCCCCCCCTGTCGATTATTCATCCGAGAA
TGACGGATGCTCCCGCCCCCGAAAACCCGACCCCCCCCCCAAAAAAAACT
GCTATGTTTTGTTTGTCGGCGGCACACCTCATTTATTCCAGGAGCACCAA
TCGAAGTCCAGGGCGAGTTATTTATCTTCCCAGCCGACCGATGCTGCTTT
GGCAGAGAAGTTGCAAAACTTAGAGCGGGCCCTGGAAGATGCG GTCAGTT
CTTGTTGTTTTGTTTTGTTTTTGTTCATTCTTTGCTCAGTAGCGCGATGG
ACTCCCCATACTGAAGGCAGTGTGCCTTCGTTGGGTAGCTTGGAAGATGC
GGTCAGTTTGTTTCGCTTTTGTTTTTCCTGCGCTTAGTACGATGGACATC
CCTTGCTGAATAACCGGCGTACCTCTATTGGGTAGCTTAGGGAGATGCGG
TCAGTCCTTCTTCATTTATTTATGTGTTTCCGTTGCTTCGTGCCATAGAC
GTCCCTTGCTAAATTAATCAGCGTACCTCTATTGAGTGGTTAGGATTTCC
TTGCGGTACTTAATATAGACCCTCATGGAAACAAGGAATGGCGTGTGACC
ACAGAAAGCGTCGCCTATTCGACCAGTACGGACATTGGAAGGTATATGCT
TAGCAGCGAGCCGTCGGAATGTTTCTTGATGAGAAGACAACACACCCAAC
ACACACGAGAAAAGGAGGACACGAGTGCTGTGGCGTCGGGTATACAACGT
ACTTAACGTTCGCACGGACGTAACCCCCCGGCGAGCCCCTGCTGAAACGA
CGACCTTCATAAGAAGTCAAGTAGAAGCTCACCGCTGTCCGATCCCGCAG
CGGGGCGAAGAAAGGGATACAGCCCTCTTTCGTGCAAAGCGAGTACTGTT
TGCACCTTGGTGCTGATTCTTTGCGCTAAGTTATCTCGCCGCCTTTTTGT
CCGTCTGTCCCGCTGAAATATACTCCGCCTTTGCTTGCTTCTCATTGGAA
AGAGCGGGCCCTTTGAGGATGGCGGTAATTCGTTTGTTTTCTCTGTTGTT
GTGCCGTTTGTTTGTTTTCTTTGTTAATGTGCCGTATGCGTTGTATGTAC
GTATGATACTTTGATAAAGTATGCATACCCCTTGGACCAATGAACTGAGC
TCGGTATCTCCTATCCACATGAAAACCGTTGGAAAGGCAAACATCTCGTC
GAGAGAGCTGCGCCACAAACGCGTATCGTTGCGCGGAGTTTCTAGAGAGC
TTCGGAGAGGCGGAAATTGGTCTGGGGGTTGGGGGGTGCTATGTTATGCC
ATGCACCGCGCGAACGGTTTGCGTGTGTACACACAAAGTATACCACGAGC
TAAGCTATGTGCAAGATGAAACGGTCCGACTGTGCCCCGTACCAAAGACG
GTGTTGCTTCAATCGAACGATACCCTTTTAATCGGATGGGATGGTTCAGC
GCCGGACTTTGCGGCACGAATACTCTCGTTCAGGTGTACTTCGAAGTACG
TATTGGTTCTGCTTTTGGTGCAGAAGGAAAAAAGTCTTGGTGCGAGAAGA
TCATGGTTCTGGGGTAGCGAGGAAACGGCCTTGGTGTAGGGACGTTATTC
TTGGTGTAGGGACATGATGGGCTTGGTGTAGGAAGATAACAGCCGGTGTC
GTGAATGGTTTTGTTTTGTTATTTGACTTGATTGCGCTGTGACGATGTTG
CGAGGTTGCTGGTGACGCGGATGTTGTGATTCTTGTGGTAACGTTGCGAC
GACACTCTATTTCTTGGTGACGCTGTGACCATACTACAGTACTAGTCTGA
TGATGTCGTGACGGCACCATTATTGATTATGCCGTTGCTACTATCAATGA
TGCGGTAACGTTGCACTGCTTCTGTCGATGATGTTGCGACGATGCTGCTG
TGCGACAAATGCCTTGATAAAACCATGCCTTCATGATGTGTTGGTGTCGT
GACGATTTCGTGAAGATGTCGTCGACGTTGTCATGATGATGCATTTTTAT
TTCTAACGATATTATTTCGTGTTGTAGCGATGCCGCTGACGATGTCGTCA
TCCGACGTCATTCGTTTACACTCTCACGGCAGGACGCGAGGAACGCGGCG
GCGAAGGGGCAGGGCCGGAGTGTGGAACCGGGAGGCATGAAGGCCGCAAA
GTCCAACTTCAACAA GTGCGTGCTTTTTTGTGCCAACCGCTACAAGTACA
CACAGCAGTAAACGGCCAGCACACTCGAGTCCTAACTGCTACCGCGAGTA
GGAAGCGGACAGCTACGCTTGAGTGCGTGCTGCTGCAGCAGTAAAGACGG
TTACAGCTACACTTGAGGATACCTGCTGGGAGTGTGCTTTGTCACATCCC
ATCTATTCTGAACGCCACTCTCTTTACCTTCCGGTCTTCCGGTATATGCG
GACCGCATTAGCCGAGATCACACAGACTACAGGCAACACATGACTTTTTC
TTGCTTGACCTGTGCATAGGTATATACGAAATACAGTTATTTTTATTTCT
GTATCTTTTTTGGCTGATCTTTTTTTTTAGGATCCGTTTTTCAGCCCCAC
AGATATACCGGACGGTGCCCCCTGTACTTGGCGTACGATTGTATTTTGTT
CTGTTTACTTTGGTTCTCCTTTCCCCCCAGATAAGTTTTTGATTGCCTCT
ACCTGTTTCTGCACGTGTAGTGACGGCGGCCTGATGTTGGTGTAAAGCTA
CTGCGAGAACCAGCAAGACATCATCACACTTAGGCGCTTCGAAAACCAGC
AACACATCATCATACACAAATGCTTCGAAACACAGGAACAATCATATACC
ACATTTGTAAACACCAATAACCTGTAAAATGCATCAAGATATTCACGCAT
ACATGCGCACACCAATACAAGTAAATACTATAGGTAAGGTGGTACATCAC
GTACCCCCCTCCGGATCCGATTCTAAAAAACTTGGCGTATCCACGACGAA
ACAACAGATACTACTGTTGCAAACACCAACCAGCAGCGTCCATTTTCGGA
AACACTTCGACGATATGTTTTCTATTCCCCAAAGATTTCGGCACAGATCT
CGACGAAATCTTTTGGTCCCCTACATTGTTTGTCAATTCCATGGACTGTT
CAACGGAACTCAATGGAACTCCACCTGACTCCATGGAGTTCTACGGAGTT
CCATTGAATTCCATGGAGTTTCATGGAAATCCATTGAACATTTCACGGAG
TTTCATGGAACTCACAAACCCATGGAGTTCCATGGAAGTGACAAATGACA
AATAGTGTCAAGGATGTATTTCTAGCGCGGCCCTCGTTCGATCGTCTCAC
TCCTCTCGACGTGGAGATGTATCTAGCCTTGAAAAATACAAAATGCTTCA
GGAGGGGGCTTTATGTAACACATACACGGCGTCACCAACGGTGTTGTGGA
CACGATATCGTAGCCGTAGCCGTACCGGCACTAGCCCGAGCGGTATAAAG
CCGTAACAGGGGAACTATACCTGTTCAAGTCTCCTTCTTTTTAACAGGAC
GCGGTCAGGCGCCCCCCCCCCCCGCCCGGTGAGTGTGCGAGTTCGCCGCA
GGTAACCCATCTTCCTTTTTCTTTGCTTTTTTCACTCTTCTTTTCCTTCC
TCTGCCAGCATCCACCAGGCTTATTTGATTCGAGTACCCGCGTAAATGAA
ATCGCCATCGTTGAGGATTCGTCTTCCGTCGCCCCCCCATTTCTTTCGCC
TGCTTGTGACGTGCCGCGGCCCGGCCACCCGTGCGGATAAAACCGCCGTC
AACCTGGGTTCCGCTTTCTCCATTTCTTTCTTACTGACATACTCGGGTAC
CAATCAGGCTTCGGGCCCCGTGTCGATACATTACATACCGGTCGCCCCGG
TGGACTAGTGGTCCCCTCGTTAACCACTAGATGCAGAGGAACGGGGGTTC
GATTCCCGGTAAATGTGTTCCTTTGCTACTTTGAAAGCGGCTATGCTGTT
AGTAAAAGCATTTTCGGCTTCGCCGACGAGGGTAGGGACCGCAGATCCCT
GCTGGGGAGAAAAAATCTCACGCATGTACCGCAGAAGGAAGGTGGGGGTA
ACTCCTCCTGTGTGGACCTTCCTCCTGTGTGACCCCGTCGATGGGCCTAG
CCTGTAGTTTGAACCGCAGGGTGCAGACTAGTGTGCCAGAGAATATGGGA
TGACAACACACACACATTACATACCAGCAATTGTCTGATCATTCTCCGTT
ATTTTTGTTCTTGCTGTGTCTTTCTTCTCATACAATGCCGGCATGACCAG
GTTCCGCGCCATGTGGGTGAATCGAAAGCGGAACGCCATGGATGTGGTGG
ACATGATCGCCGATGGGATGGAGAAGAAGCCAAAGGTTGTCACG GTGAGG
CTCTATCTCTTCTTCTGTCCGAAGTTGATGAGGCTTGCCTCACACCTTAA
AGTTGATGAGGCTCTTCATTTCACTTTTTCCGTTGTATTAAAATACCACA
ACTCATAACATTCTATAAAGTGATGAAAGTGGTTTTGTTCGATGGATATC
ACGGTAAAATAGAGTTTTCCACTCTGTCTTTTTCAGCTCCAACACTATGG
AATCATTCATCTCTTCTGTCATTCCAAGCTCAAGCACTTGTCATTTTTTA
TGCGGTGTCCTAGGGTTTTTGTCACGGCGAGAGTGCTATAATACGAAGCG
ATTTTTTTTACTGTTTTCGGGCCCAAAAACTTCCTAGGCCGGTACTACGT
GCTGTCCGAAGGATGCCATTGCTATGAGACATGGGTGTTGCACTTCCCTC
TGCCATTTTCAAAGCCAGAAGCTCATTACATTGGCACGTTCAGTCCGAAG
GGTTTTCACTGCCGTGAGACGTAATTTCACCTTGTATTATTTTTAGAGCT
AAAAGCTCAATAGTTCGGGACGTGCAGTTCAAAGGGCGTCACTGCCGTGA
GACACGACTTCAATACTTTCTTGTTGTACCTGTCGTGTTGTCAGTGCTCC
AAGATCGTGAGAACCTATTTTTCTTCTGTTGTGCATAGGTGGGGGTCGTG
AAGTTTGTAAATGGTGAGACTATTTATTTGCAAAGTTAAACGTTGTGGTT
CTCAGTCAGCTGGTGTCTTAAGGTCGTCACGGTGACACCATTTCTTTGTG
TTCGTACTGTCAGTTCGAAGCTACTTTGTTGTCCGTTTGTATCCTTAGTG
TCGAAAGCCACACACATCCACAACCGAACATTGTGTTGCTCGTACCGCTA
TTTTGTCGCTCGCTGAGCCAACAGCAACGGGCGTTTTTGGTTCACACCTA
GGGATACGGACGCCGATACCGAACAGAAAAGCAAAACCAGATATTTGGAT
ATTTTGCAACTTTGTTATTCTGTTGGTTCCGAAAAAGGCAACCGGCGTCG
AAACCATGGAACCATCCTGTCGAACATGTTTCCGATGACGCAGTAAGACA
CCTTTGGTGTTGGTAGATAAACGCCGTCTTCGTTGTGGGGTTTCTCAATC
ATAGATCGCCTGGTCTTTGGTATGCAAATAATCGCCCTTTTCGTTGTGGA
GCACCTTTATCAGACATCGGTTGGGATTGGCATATAAATGTCCGCTTCAT
TGTGGAGTACTTAAGTCAGACATCGTCTGGTATTGAGTATACAATCGCCC
TCGTCGTTGTGGGTTGTGGAGTACCTTTATCAGACATAGTCTGGTGTCAT
AGTATATTAATGCCCTCTCCATGGAGTGCCCTGATCAGACACAGTTTGGT
GTTGGCAAAGAAAAGCCCTCTTCGTTGTGGAGTACCTGAATCAGGCAACG
TCTGGTGTTTGATACATAAACGCCCTCGTCGTTGTGGAGCACGTAAATCA
GACATCGTCTGGTGTCTGGCGATTAAATACCCTCTCCGTTGCAGACGGCC
CTATTCAGACACCGCCTGGTGTTGAGAAATTCAAGCCCTCTCCGTTGTGG
ATTACCTTAACCAGACATGGTTCAGTGCTGTCAAATACATGCTCTCTTCG
TTGTGGAGTATCAGATACCGTCTGGTCTTCGTTTGGCAAATGAAAGGCTT
CGTCGTTGTGCACCTTAGTCAGACATCGTTTGGTGTTGTCAAATACGAGC
CCTCTCTGTTTTGGAGTACTTTGATTAGATATGGTTTAGGTTTGTCAAAT
ACTTTGTGTAAACCATCTTCTTTTTGGAGTACCTTAATCATACATGGTTT
GTGTTTGGTAAAACAACTCTCTTAGTTGTTGGGTACCTTTATCAGACACC
GTCTGTGTTGGCAAATGAATGCCCTCCCGTTGTAGGGTACCTTATCCAGA
AATGGTTTTGGTGTTGGGAGATACATGCTCTCTTCGTTGTGGAGTTTCAG
ACACCGTCTGGTGTTTCGATTGGCAAGTGAAAGCCTTCTTCTTGGTTCAC
CGTAGTCAGATATCGCTTGTTGTTGGGAAATATGAGCCCTCTTCTTCGTG
GAGCACCTTAGTCAAATATGGCTTGGTGTACTTCAAGCCCTCTTCGTCGT
GCACCTAAGTCAGATATCGTTTGGTGTTGGCGAACAAAAGCAGTCTTCGT
TGTGGGGTACGTTCATCAGATACGGTTTCTTGTTGGAAATACAAATCGTT
TTCAGTGTGGAGCACCTAAATCAGACATGGTTTGGTGTTGAGAGATGAAT
GCCCATTGTGGGCTATGTCAGACACCGTTTGGTCGTAGTCAAATAGATGC
CCTCTTCATCGTGGAGGACCTCAGTCGAGCTCCGAAAATCGCCCCAGGGA
GTTCGGTGTGGTATCCTGTGCGACCCGGGTGGGGGGCCTAGCCGTGCTCC
GTACGTACTGGCTGCTACAGGCACACCGAATCGGGTAACGTAAGTAAAGA
CGGTTATCTCCCGCGTGATAAAAAACCACTTCGATACTTTCAGAAAGTAC
GGTCTCTCCGGCCTCTGCCACGCCCGGGTTGGCGTGCTGCATCGCTAGGA
GGTTCCGGAGCTAGAACCGCGCAAGGCGTAAAATGTCGTGGTGGTAAGGC
GGGCCCAGGCCAATCCGCCGAGTCGGCAACACTGCAACAGAGTTGATTGG
TGCAAATTCCATTGTTTTGAGAATAACAACAGTAGACTTAATGTCATGTT
GGCACGACCGCGGGTAGTTGGGAACTGGGAGAAGGAGTGGTCGACGACCA
AACCACTCCGATATTTTCAGAAAGTATGGCCTCTCCGGCCTCTGCCACGC
CCGGGTTGGCGTGCTGCATCGCTAGGAGGTTCCGGAGCTAGAACTGCGCA
AGGCGTAAAATGTCGTGGTGGTAGGGGGGGGCCAGGCCAACCCACCGAGT
CGGTAACACTGCAACAGTGTTGATTGGTGCAGATGCCATTGTTTTGAGAA
TATCATCTTGGCACGACCGCGGGTAGTTGGAAACTGGGAGAAGGAGTGGT
CGACGACCGAACCATCAGGAAAAAGAATGCTTGCGATCATGCCAACATTT
CTGCACTCGATGTCTTTCAGAAACAGCAATCAATCAACACAACTTCAGCG
AAAATTACAACGCGACATTAAACAACAGCAATGGACCAACACGAAATGTC
ACGTTCTCTCTTCCCTCCTGTAGATCTCGCCAATTAATTTTTGGGGTCGC
GCTCTGACCATGCATGATTCCGGTAGAGAATCCTTGTGGTATACCCATAT
AACTCATGACATACACATGAAATGTAACATGCACTTCGAAGTAAACAAGA
ATGTAAGTATTTACAAGTATTGCTTCATTGTTTGCAACACGCACCAAACA
ATGCAAACATGGAACCAATCGCAAACGAGAACTAATACATGGCAACAGAA
GGATAGTATCGGTCGTTGCACGCTCTGTACATGTACATGATCGAAGCATG
TGTTATTCTTTGTCAAACTAGAGTAACCTTCGGAACTACAGTCGTCCCCG
CTTTAAGGACACTAATCTTAAGGAAACTCCCCGCTATAAGGATACATTTT
TTTCCCAGAACATGGTGCCCCGCAGATATACAATAATAGGGGGTACCTTT
TCCACTACGCGGCCCCCATTTTTTTGCGGGGCAGCACACCTGTACAGCAG
TACATATAGCATCGACAGCGGTCTGCTGCAGCCCGCACTACTGCGTGTGG
GTATGGAGAGATTCCTCCCATCTGCTGGCGTGATGTTCACCGTGAGGATG
ACGCCTTGACAATAATAAAAGCCTGCAGCAACACCAGCGCACTGCCGCAC
ATTACAATCGATCGTGCTGCAGTATTGGAGTACTACAGCCGTAGTGTGGC
GGCCTTCCAACGCGTGTTGTCGTAGTTTAAAGCAACACAGCAGCACAGCA
GTAGTTTCGTGGTCGCATTCCTGCTTCAAATGCGCGTATTTTGACACATG
TTACACCTCCATTGGCCCCGGGGATGGTGAGTTAGTGGCCCCGGAATCTT
AAGGACACTTCCGCGCGTTAAGGACACTCCAAAAAAAAAAAAACGCGGTG
TGTCCTTAAAGCGGGGTCGACTGTACTGGTAGTGAGTGGGACATTGCCCT
CTCCCTCTGTCTTGTCCATTTTTACGCCCGTCCGTTTTTTTTCTCTTTCG
TACTTTCGCTGCTGTTTTTCTTTGCCAAACTACAGTAACGTTCGGAACTA
CTGGTAGTAAGTGGGACATTGCTCCCCTGTCCGTCCATTCTTACGCCCGT
CTATTTTTTTCTTTTTATGCTTTCAAACTTTTTTTTCTATGCGCACCGCA
GAAGGAAGGTAGAGATGGATTGATTTGTAGGGCAGACGCCAGAAAGCGGT
ATTTAGCCTAGTTTCCCCGCCACCAAGCGGTACACCAAAAGCCCCGTTCG
CGTAGCTGAAACTCCCGTATATGTTGAGCTGGTTCCTGTCTGTCGTGACC
CTGGCTGGTGCGCCCAACTCATACCAAAAGGTGTAGACTGTGGTTCAGGG
TAGATAGGTGTGCCGACACAAGCACGCAGGGTGTCGCCTTTCATTTTTCT
CTCCTTGTTCAATCGTTTTTTTTTATAATCGGCTATTTTTTTGTACCCGC
TCTCTATCCCGACTACAGGAGATGCTGGGGGTAGAACTCGACGAAGGACC
CATCCCGACGAAGATGTAG AAGTGTTTCTCTACCAGTGTACGGGATGTAC
GACGACGTTATGCTTTTTTACAAATTGCCCACCACAAGAGCCGTTTGTTT
CAAGCCTCGATCTTGTGCTTCGACGAGAGGATCCCAGCGCACCAAAAGGG
TCGTTGTTGTTGTTGTTGTTGTTGTTGTTGCCGATTCTCGCGTTGGACCA
CCACCGCCGTGTCAGTGTGTGCTAGAAAATTTTGTCAGGGGTGTGTGTAA
TCTTTGCAATGCCACCATCTTAGGCTATGAGTAGTGGTGAACAACGCCGT
CTCCGGCAGTAGAAACTCCAAAACAAGGAAAACCGGCCGACGCGCGCGAG
ATGCGGCACGTTGGCGAACCACATAGACATGTCATGGAAACAGGAATACG
TCGTTCGACGTTTGTGGTGCCCCGGTCATGAGCAGCAGCTCAAAAAATGA
AAAAAATCCCAGAGTTAACTACGTTTCATATAATATTGGTCATTTCTTCT
CTTTTTCTATGGCGGGGTAGGGGAAACCCTGCCGTACTCTGCTGTCGCCA
TTTTGACGCGCATTCATCGCTTTCGAGAGTAGCGACTCGCACCCCTTCCC
CTGCATAGTAGAGTCATCACACCAAAACATGGGCGCTGTAAGCGCTTGTC
ATGTCCCAGTACTGCGTGAGACTTGCTGATGTTGTCCCCGTCTTGTGTGG
GCTGTCCTCTTGGGCCATAGCTTATCTCGTATAGCTGTACGAAACGGCAG
GCTTTTGTTTGTTGTCTTTATTTAGCCTTGAGATGGAACTAGAGTCTGGG
GATGTTATCCGCGTTTATGTGAGGCTGCAGGAGGATTCAGCACCCGTCGT
TGCCGTGGTCGAACGTTGCTGCGCGTTTATCACACATTCAATGAACAACG
GCATTGTTGTGGTTCTAGTTGATGCCGTCTAACAGTACCCGCTGCCACAT
GAGGCCTAGAGATGCC back to top Coding sequence (CDS) from alignment at P-littoralis_Contig102:545530..563995+
>mRNA_P-littoralis_Contig102.114.3 ID=mRNA_P-littoralis_Contig102.114.3|Name=mRNA_P-littoralis_Contig102.114.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1329bp|location=Sequence derived from alignment at P-littoralis_Contig102:545530..563995+ (Pylaiella littoralis U1_48) ATGGCAGGAGGAGATGGTTCCTCGGAGGAGTTTGTAGAGGATGATTCAGG TGGAGAGGTGGAGGAAGAAGAGGAGGAGGAGGAGGGTGATTCTTCGGCTT CGTTCGCATCAGAAGACGACGAGGGCGACGAGGATGACGGCGAGGACAAC GGGGACGACAGCGATGTCTTCGAAACCCCCATCAAGGCGAGAAAACGCTC AAGGACTCCGAGCTCGGAGCAGCGGCCCGCCCCGGCATCGGCATCTCTCA GCGGGAAGAAGAAAAGAAAAGCCTCCTCCACTCCCGCGGCCGTTTCGGAC AGAGGCAGCGTCAGCAGTAGCAGTAGCGGCAGCGGTAGCGATAGCAAAAA AAGTGTCGGGGCATCACCCGGCGCGGCGGCGGCGGTTGCGGCAGCAACAA ACAAGAAAGCTACCCCGTCGGGGGGGAAGGGGAAATCGACAGCGGCGGCG GCGGCAGGAGGAGGAAGCAAGAACGATGAGCCACCTTCGCAGGCTTCATC CTCGTCGTCGCTGTCGTCACCAGGGCGTGGAAGTCAAGCGACCCCGGGAG CAGGAGGCGCAGGCGGCGGCGGGAAGGCCGCTGGCGCACGAGATCCGGCC AAATCGACCTTCGGTGGTGTCGGGCGGGGCTCGGCGGCTGGGAAGAAACC GGCAGCAGCAGCCAAAGGAGCTGGGTCGGGAGGCGCCGCTGCAAAGACCC CCAAGGCAGCAATCTCCGACTACATGCAACAAGCCAACCGGCCTTACAGC TACATCAACGTCTTCGACAACCTCCGCAAGAAGATTCCCAAGGCAATGGT GCAGAAGCTATTGGATGAGCTGGTGCGGGATGCCAAGCTGAAAGTGCAAG AGTTCGGCAAGGCCAGGATCTACTACGCCAATCAGGACGCCCTGCCGAAG GGAGCCGGCAACGCTTCTCCAGAAATGATGCAGAGACTGGACCAGGAGGC CAAGACGCTGACCTCCCACTTCGAGACCGCGGCCAAGGAGGCGAGTGCAG AGCACCAATCGAAGTCCAGGGCGAGTTATTTATCTTCCCAGCCGACCGAT GCTGCTTTGGCAGAGAAGTTGCAAAACTTAGAGCGGGCCCTGGAAGATGC GGACGCGAGGAACGCGGCGGCGAAGGGGCAGGGCCGGAGTGTGGAACCGG GAGGCATGAAGGCCGCAAAGTCCAACTTCAACAAGTTCCGCGCCATGTGG GTGAATCGAAAGCGGAACGCCATGGATGTGGTGGACATGATCGCCGATGG GATGGAGAAGAAGCCAAAGGTTGTCACGGAGATGCTGGGGGTAGAACTCG ACGAAGGACCCATCCCGACGAAGATGTAG back to top