Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 471 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 315 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789355.9194465-UTR-P-littoralis_Contig1017:79681..79830 | 1680789355.9194465-UTR-P-littoralis_Contig1017:79681..79830 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1017 79682..79830 + |
| 1680789355.940401-UTR-P-littoralis_Contig1017:80145..80152 | 1680789355.940401-UTR-P-littoralis_Contig1017:80145..80152 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1017 80146..80152 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789355.9311996-CDS-P-littoralis_Contig1017:79830..80145 | 1680789355.9311996-CDS-P-littoralis_Contig1017:79830..80145 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1017 79831..80145 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1017.24.1 >prot_P-littoralis_Contig1017.24.1 ID=prot_P-littoralis_Contig1017.24.1|Name=mRNA_P-littoralis_Contig1017.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=105bp
MLRYSQEGKKGRCRSERAGGIEILSAKTFRNTSTQFFALELSCFGHGSKG
PRGILRDLEKGRVILNLFCTKRCCILYQMRCMHDLMSSLKLKSMPDNLKV
LFDR* back to topmRNA from alignment at P-littoralis_Contig1017:79682..80152+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1017.24.1 ID=mRNA_P-littoralis_Contig1017.24.1|Name=mRNA_P-littoralis_Contig1017.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=471bp|location=Sequence derived from alignment at P-littoralis_Contig1017:79682..80152+ (Pylaiella littoralis U1_48)
CGGCCAGTAGCAAGAGCTCCTGCGGTGCCGGCGGATCCTCCTCCCGTTTA
CGGCTCCAACACCGCCGCAGCGCTAAAGGTATGTATGTTCGATACAAAAA
CCTGCTGTTGGTCACATAAGGTACCACGGGACCCACCTCAACCGACTCAA
TGCTCCGTTACTCACAAGAAGGAAAAAAGGGTCGGTGCCGTAGCGAAAGG
GCGGGTGGTATTGAAATTCTTTCGGCGAAAACTTTCCGGAACACGTCGAC
CCAGTTTTTTGCGTTGGAGCTATCGTGCTTTGGACACGGGTCGAAGGGGC
CACGTGGTATCTTGCGCGACCTCGAAAAGGGACGCGTTATTTTAAACTTG
TTTTGTACCAAAAGGTGTTGTATTTTGTACCAGATGCGATGCATGCATGA
TTTGATGTCCTCCCTCAAACTGAAATCTATGCCTGATAACCTTAAGGTAT
TGTTTGATCGGTAACTGTTCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1017:79682..80152+ >mRNA_P-littoralis_Contig1017.24.1 ID=mRNA_P-littoralis_Contig1017.24.1|Name=mRNA_P-littoralis_Contig1017.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=315bp|location=Sequence derived from alignment at P-littoralis_Contig1017:79682..80152+ (Pylaiella littoralis U1_48)
ATGCTCCGTTACTCACAAGAAGGAAAAAAGGGTCGGTGCCGTAGCGAAAG
GGCGGGTGGTATTGAAATTCTTTCGGCGAAAACTTTCCGGAACACGTCGA
CCCAGTTTTTTGCGTTGGAGCTATCGTGCTTTGGACACGGGTCGAAGGGG
CCACGTGGTATCTTGCGCGACCTCGAAAAGGGACGCGTTATTTTAAACTT
GTTTTGTACCAAAAGGTGTTGTATTTTGTACCAGATGCGATGCATGCATG
ATTTGATGTCCTCCCTCAAACTGAAATCTATGCCTGATAACCTTAAGGTA
TTGTTTGATCGGTAA back to top
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