mRNA_P-littoralis_Contig1017.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 161 bits (408), Expect = 1.680e-43 Identity = 75/102 (73.53%), Postives = 90/102 (88.24%), Query Frame = 1
Query: 103 RPRYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPR 408
R YAR+ GLDK+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R
Sbjct: 554 RSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQR 655
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 137 bits (345), Expect = 8.960e-38 Identity = 67/99 (67.68%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 112 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPR 408
YARK GLDK GY SADDSKLE LMDILRFF++WR +LE + T+GD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ D P ++N R
Sbjct: 44 YARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLR 140
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.910e-34 Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query: 112 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRH 411
YARK GLDK YI SADDSKLEE+MDIL F++WR +LE + T+GD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ D P ++N R+
Sbjct: 434 YARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRY 533
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 111 bits (278), Expect = 3.880e-29 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 145 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVS 372
GYI S DDSKL+ELMDIL FF++WR +LE + T+GD WK HFIT++ WTD RV ILG V MCRYL E DSRFK+S
Sbjct: 3 GYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYLIEKDSRFKIS 78
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 105 bits (263), Expect = 1.690e-26 Identity = 50/71 (70.42%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 112 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFV 324
YARK GLDK GYI SADDSKLEELMDILRFF++WR +LE + T+G WK +FIT++SWTDIRV ILG V
Sbjct: 31 YARKNGLDKMVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 7.440e-21 Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = 1
Query: 103 RPRYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEK---TTVGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKV-SRPRDTPRYVNPRHHCQ 420
R + RK G K G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ S + R+++PR+ Q
Sbjct: 69 RSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQ 179
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 8.600e-20 Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 145 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVS 327
GYI SAD SKLE LMDILRFF++WR +LE + T+GD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 3 GYIRSADRSKLE-LMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.070e-18 Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 118 RKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 354
RK+G +K+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+
Sbjct: 483 RKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDE 559
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 7.770e-16 Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 142 AGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYS 288
AGYI SADDSKLEELMDILRF +WR +LE ++T+GD WK HFIT++S
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 6.250e-6 Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 124 KGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 354
K +D + ITS D L+ L++IL +F+ W +L D+ F+ + +W D+R++ILGFV+M RY+F DD
Sbjct: 502 KRIDIRKSCITSKDSPLLDRLLEILEWFDTWWQDLN-LFGGSDLALDDLFLPDQTWDDLRLTILGFVAMTRYVFGDD 577 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1017.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1017.1.1 >prot_P-littoralis_Contig1017.1.1 ID=prot_P-littoralis_Contig1017.1.1|Name=mRNA_P-littoralis_Contig1017.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=140bp MLSTPEKDEGGPRTRSHTTPTTSDRALESDRCAPRPRYARKKGLDKKAGYback to top mRNA from alignment at P-littoralis_Contig1017:623..2075+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1017.1.1 ID=mRNA_P-littoralis_Contig1017.1.1|Name=mRNA_P-littoralis_Contig1017.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1453bp|location=Sequence derived from alignment at P-littoralis_Contig1017:623..2075+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1017:623..2075+ >mRNA_P-littoralis_Contig1017.1.1 ID=mRNA_P-littoralis_Contig1017.1.1|Name=mRNA_P-littoralis_Contig1017.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=420bp|location=Sequence derived from alignment at P-littoralis_Contig1017:623..2075+ (Pylaiella littoralis U1_48)back to top |