mRNA_P-littoralis_Contig1014.10.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1014.10.4
Unique NamemRNA_P-littoralis_Contig1014.10.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A0A6H5JV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV63_9PHAE)

HSP 1 Score: 549 bits (1415), Expect = 1.380e-187
Identity = 296/417 (70.98%), Postives = 320/417 (76.74%), Query Frame = 3
Query:   54 SMPRKTPLPVVDDSSGGSAIASDFVMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQTPSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDV----VEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAEPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFLGAATSTELSSSTGLLDDDAKVSLDQEALRVRADARVPPLSGHWGGGAEKGNGKGNSSRRKGKQRAALTDGGGEVADPARSGSRRVFRHLCTATSCRGL 1292
            S PR  PLP     + G+A AS F+MPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFY SGYDRGHLAPAG+HKTTQA LT+TFLLSNMAPQ PSFNRGYW DFEEFVR LVVPSERSIKAA     AA  + +  S L PPFKD+YVITGPLFLPSKE ++ A      VD DQG      ++VPS S   PA+ KWVVKHDI+GNPMQMVAVPTHFFK+IVAEPYPPPPSEAL + PTTFVAAFAMPN  IPNNTDLRNFLVPLG L SVSGMRF G          TGLLD+ AK+SLD+EA++VR  A VP LSG WG G EK N      R+KGK   +L      +AD       RVFRHLCT TSCRGL
Sbjct:   48 STPRSLPLPQPAQENYGTAPASAFIMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGNHKTTQANLTQTFLLSNMAPQMPSFNRGYWGDFEEFVRTLVVPSERSIKAA-----AAAGF-STSSSLSPPFKDVYVITGPLFLPSKETSSTAG-KSNAVDIDQGHAERTAMDVPSQSPSTPAATKWVVKHDILGNPMQMVAVPTHFFKIIVAEPYPPPPSEALVSKPTTFVAAFAMPNADIPNNTDLRNFLVPLGALSSVSGMRFFG----------TGLLDETAKLSLDKEAIQVRERAGVPALSGDWGTGIEKTN-----RRKKGKDDHSLP-----IADRP-----RVFRHLCTTTSCRGL 432          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: D8LHV3_ECTSI (Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV3_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 1.920e-168
Identity = 259/332 (78.01%), Postives = 276/332 (83.13%), Query Frame = 3
Query:  102 GSAIASDFVMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQTPSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDV----VEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAEPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFLGAATSTELSSSTGLLDDDAKVSLDQEALR 1085
            G A AS F+MPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFY SGYDRGHLAPAGDHKTTQA LT+TFLLSNMAPQ PSFNRGYW DFEEFVR LVVPSERSIKAA     AA  + +  S L PPFKD+YVITGPLFLPSKE A+ A   G  VD DQG      V+VPS S+  PA+ KWVVKHDI+GNPMQMVAVPTHFFK+IVAEPYPPPPSEAL + PTTFVAAFAMPN  IPNNTDLRNFLVPL  L SVSGMRFLG          TGLLD+ AK+SLD+EA++
Sbjct:    9 GKAPASAFIMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGDHKTTQANLTQTFLLSNMAPQVPSFNRGYWGDFEEFVRTLVVPSERSIKAA-----AAAGF-STSSSLSPPFKDVYVITGPLFLPSKETASVAG-TGNAVDIDQGQAEGVAVDVPSQSSRTPAATKWVVKHDILGNPMQMVAVPTHFFKIIVAEPYPPPPSEALVSKPTTFVAAFAMPNADIPNNTDLRNFLVPLEALSSVSGMRFLG----------TGLLDETAKLSLDKEAIQ 323          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A4RRT2_OSTLU (Endonuclease (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RRT2_OSTLU)

HSP 1 Score: 176 bits (446), Expect = 5.030e-47
Identity = 110/271 (40.59%), Postives = 140/271 (51.66%), Query Frame = 3
Query:  186 EEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQT-PSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAEPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRF 995
            + Y   +D RTRN RWV+E+I  +T++GPG RKKS F  D  +    RS L  F  SGYDRGHL  A D K +Q ++  TF LSN++PQ  P FNR +W+ FE+FVR     SE S KAA                        YV TGPLFLPS+       + GG +                 P   +W +++ ++G P  M+AVPTHFFKVI+ E              T   AAF +PN  IPNN  LR F+VPL  LE VSG+ F
Sbjct:    7 KSYAHAFDGRTRNPRWVMEKITPDTLAGPGTRKKSDFYEDEEVSWKHRSRLDAFRGSGYDRGHLVAAADQKGSQEEMDATFALSNISPQIGPGFNRDFWAKFEQFVRDAA--SESSSKAA------------------------YVATGPLFLPSQR------VEGGSL-----------------PRPTEWEMRYPMLGEPPAMMAVPTHFFKVILVE----------GKDDTVSCAAFVLPNAPIPNNFPLRRFVVPLTDLEVVSGLEF 218          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A0A167FA38_9ASCO (Endonuclease n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167FA38_9ASCO)

HSP 1 Score: 178 bits (452), Expect = 9.350e-47
Identity = 108/313 (34.50%), Postives = 154/313 (49.20%), Query Frame = 3
Query:   93 SSGGSAIASDFVMP--FVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVS-GPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQT-PSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAEPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFLGAATSTE 1019
            S  G+ + S  V P  + ++YG+P     I   E++ SC+D +TRN  WV+E I   ++    GDR  S F+ D+ +  LFR  L D++ SGYDRGH APA D K +Q  + ETF L+NM PQ    FNR YW+ FE F R                            +L   +  + ++TGPL+LP K+                              +  KW V +++IGNP   +AVPTHFFK+IV E     PS AL +     + AF +PN  I NNT L++F VP+  +E  +G+ FL    ++E
Sbjct:   29 SRAGAVVRSSLVNPAEYFQKYGFPGPVHDIASREQFISCYDRKTRNPAWVIEHITGQSLKVRDGDRGSSIFKEDTAVPALFRGQLRDYFRSGYDRGHQAPAADAKFSQNAMDETFFLTNMCPQVGDGFNRDYWAHFEHFCR----------------------------KLTDSYASVRIVTGPLYLPKKD------------------------------SDGKWRVSYEVIGNPPN-IAVPTHFFKIIVGEN----PSPALGSPKGVAIGAFVLPNEKIDNNTPLKSFYVPIESVERSTGVEFLPLLPASE 278          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A0A0J9XFA4_GEOCN (Endonuclease n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XFA4_GEOCN)

HSP 1 Score: 175 bits (444), Expect = 1.180e-45
Identity = 109/292 (37.33%), Postives = 150/292 (51.37%), Query Frame = 3
Query:  144 RYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTV-----SGPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQT-PSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAE-PYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFL 998
            +YG+P     +   +E+ S +D R RN  WVVE I   ++     + P DRKKS F+ D  +  LFR  L+D++ SGYDRGH APA D K +Q  + ETF+LSNM+PQ    FNR YWS FE+F R                            RL   + ++ ++TGPL+LP K+                              A  K+ V +++IGNP   +AVPTHFFK+IVAE P     S+ ++      V AF MPN  IPN+T L++F VP+  LE  SG++FL
Sbjct:   55 KYGFPGPVNDVQYHDEFVSSYDRRMRNPGWVVEHITAESLRTPPNAPPVDRKKSVFKEDLTIPELFRGRLADYFRSGYDRGHQAPAADAKFSQKAMDETFVLSNMSPQVGDGFNRDYWSHFEDFCR----------------------------RLTKEYTNVRIVTGPLYLPKKD------------------------------ADGKYRVTYEVIGNPPN-IAVPTHFFKLIVAEQPLKDLKSDKVA------VGAFVMPNAVIPNSTPLKSFAVPVNALERSSGLQFL 281          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A0A1D2AGG2_AUXPR (Uncharacterized protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AGG2_AUXPR)

HSP 1 Score: 176 bits (447), Expect = 2.320e-45
Identity = 118/322 (36.65%), Postives = 160/322 (49.69%), Query Frame = 3
Query:  144 RYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQTPS-FNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAEPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFLGAATSTELSSSTGLLDDDAKVSLDQEALRVRADARV 1106
            ++G P  D + + +    S  D+R RN +WV+E +  + + G G R  S F  D+ +   FR+ LSD+  +GYDRGH+APA +HK +Q  + ETF LSN+APQ    FNR YW+ FE FV+               TT++              F D++V+TGPL++P                         P PS        WV++H ++G P QMVAVPTHFFKV++AE          STA    VAAF MPN+ IP    L  F VPL  LE VSG+ F  +           LLDD  ++ LD  ALR +A  R 
Sbjct:   52 KHGLPMSDGIRMYTNFIASI-DTRLRNPKWVIEHLTRSKLKGDGTRSSSQFTEDAGVGARFRAKLSDYRGTGYDRGHMAPASNHKESQGSMDETFSLSNIAPQVGGGFNRDYWARFERFVQD--------------TTKS--------------FDDVWVVTGPLYIPR------------------------PGPSG-------WVLEHPMLGQPPQMVAVPTHFFKVVLAE------QGDASTA----VAAFVMPNSAIPAEYPLSAFSVPLTSLEEVSGLTFFPS-----------LLDDARRMGLDAAALRWQALGRA 292          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A0A1E4TK52_9ASCO (Endonuclease n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TK52_9ASCO)

HSP 1 Score: 172 bits (435), Expect = 2.460e-44
Identity = 104/287 (36.24%), Postives = 144/287 (50.17%), Query Frame = 3
Query:  144 RYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVS-GPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQT-PSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAEPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFL 998
            +YG+P     +    EY  C+D RTRN  WV+E I   ++    GDRKKS F+ D  +   FR+ L D++ SGYDRGH APA D K +Q  + ETF L+NM PQ    FNR YW+  E+F R                            RL   ++D+ ++TGPL+LP K               D G                K++V++++IGNP   VAVPTHFFK+IVAE +   P +  +      +AAF +PNT IPN   L  F V +  +E+ +G+ FL
Sbjct:   61 KYGFPVPVHDVKRYNEYVRCYDRRTRNPNWVIEHITAESLKIRDGDRKKSVFKEDESIPSRFRALLRDYFRSGYDRGHQAPAADAKFSQEAMDETFYLTNMCPQVGDGFNRDYWAHLEDFCR----------------------------RLTEQYRDVRIVTGPLYLPKKM--------------DNG----------------KYIVQYEMIGNPPN-VAVPTHFFKIIVAEHHKSKPYDQRAA-----LAAFILPNTAIPNEVPLEKFEVDISAIENSAGVEFL 283          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A0A1G4K076_9SACH (Endonuclease n=1 Tax=Lachancea dasiensis TaxID=1072105 RepID=A0A1G4K076_9SACH)

HSP 1 Score: 171 bits (434), Expect = 5.120e-44
Identity = 106/287 (36.93%), Postives = 143/287 (49.83%), Query Frame = 3
Query:  144 RYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGP-GDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQT-PSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAEPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFL 998
            +YG+P     ++  EE+ SC+D + R   WVVE I   ++S   GDRK S FR D  +   FR+ L D++ SGYDRGHLAPA D K +Q  + ETF L+N+ PQ    FNR YW+  E F R LV                              +K + V+TGPLFLP K+P                                K  V +++IGNP   +AVPTHF+K+IVAE   P P     T+ +  V AF +PN  IPN+T L +F VP+  +   SG++FL
Sbjct:   69 KYGFPGPVHDLMNREEFVSCYDRQLRIPYWVVEHITPESLSNKSGDRKNSFFREDESIPDTFRARLRDYFRSGYDRGHLAPAADAKFSQKAMDETFYLTNICPQVGDGFNRDYWAHLEYFCRQLVEK----------------------------YKSVRVVTGPLFLPKKDPV-----------------------------DGKMKVTYEVIGNPPN-IAVPTHFYKLIVAENAAPDP-----TSDSVAVGAFVLPNDKIPNDTKLTDFEVPVDAISRSSGLQFL 292          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A0A1E4TPG6_PACTA (Endonuclease n=1 Tax=Pachysolen tannophilus NRRL Y-2460 TaxID=669874 RepID=A0A1E4TPG6_PACTA)

HSP 1 Score: 171 bits (434), Expect = 7.100e-44
Identity = 118/316 (37.34%), Postives = 157/316 (49.68%), Query Frame = 3
Query:   72 PLPVVDDSSGGSAIASDFVMP--FVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVS---GPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQT-PSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVAE-PYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFL 998
            P   V +  G  +  SD V P  F K YG+P     +   EE+ +C++  TRN  +VVE I   ++S     GDRK S F+ D ++   FR+ L D++ SGYDRGH APA D K +Q  + ETF L+NM+PQ    FNR YW+  E+F R                            RL   ++ + ++TGPLFLP K+P                                K+ V +++IGNP   VAVPTHFFK+IVAE P   P S+AL+      VAAF +PN  I N+T L  F VPL  LE  SG+ FL
Sbjct:   54 PTSQVKNGKGFVSDQSDLVRPADFFK-YGFPGPIHDLQTREEFVACYNRVTRNPYYVVEHITPGSLSKNGANGDRKNSVFKEDEQIPAKFRARLRDYFRSGYDRGHQAPAADAKFSQKAMDETFYLTNMSPQVGEGFNRDYWAHLEDFAR----------------------------RLAQNYRSVRIVTGPLFLPKKDPI-----------------------------DGKFRVTYEVIGNPPN-VAVPTHFFKLIVAESPVQNPTSDALA------VAAFVLPNDVISNDTKLTAFEVPLEALEISSGLEFL 304          
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Match: A0A1R0GS83_9FUNG (Endonuclease n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GS83_9FUNG)

HSP 1 Score: 172 bits (435), Expect = 7.300e-44
Identity = 100/291 (34.36%), Postives = 148/291 (50.86%), Query Frame = 3
Query:  144 RYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYESGYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQT-PSFNRGYWSDFEEFVRALVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEPAAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAVPTHFFKVIVA---EPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLVPLGVLESVSGMRFLGA 1004
            RYG+P         + Y   ++   +N  W+ E +  +T+ GP DR+KS FR DS +    R+ LSD++ SG+DRGH+APAG+ K +Q  + ETF+LSN++PQ    FNR YW+ FE F+R L             T R               +K +YVITGPL+LPS +P                              + KW V + +IGNP   + VPTHFFK ++A   EP P  P+ + +  P  F+ AF +PN+ + N T L+NF+ P+  +E  +G+    +
Sbjct:  103 RYGFPGPINDSGVRQSYAYSYNRMMKNPNWIAEHLTRDTIKGPADRQKSKFREDSSIPHKNRTHLSDYFRSGFDRGHMAPAGNSKFSQQAMDETFILSNISPQVGEGFNRHYWAFFESFIRDL-------------TNR---------------YKHVYVITGPLYLPSHDPK-----------------------------TNKWTVTYQVIGNPPN-IPVPTHFFKAVLATNNEPSPVSPTSSSNKEPY-FMQAFVIPNSKVLNETPLQNFITPIDAVERATGLELFSS 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1014.10.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV63_9PHAE1.380e-18770.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHV3_ECTSI1.920e-16878.01Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A4RRT2_OSTLU5.030e-4740.59Endonuclease (Fragment) n=1 Tax=Ostreococcus lucim... [more]
A0A167FA38_9ASCO9.350e-4734.50Endonuclease n=1 Tax=Sugiyamaella lignohabitans Ta... [more]
A0A0J9XFA4_GEOCN1.180e-4537.33Endonuclease n=1 Tax=Geotrichum candidum TaxID=117... [more]
A0A1D2AGG2_AUXPR2.320e-4536.65Uncharacterized protein n=2 Tax=Auxenochlorella pr... [more]
A0A1E4TK52_9ASCO2.460e-4436.24Endonuclease n=1 Tax=Tortispora caseinolytica NRRL... [more]
A0A1G4K076_9SACH5.120e-4436.93Endonuclease n=1 Tax=Lachancea dasiensis TaxID=107... [more]
A0A1E4TPG6_PACTA7.100e-4437.34Endonuclease n=1 Tax=Pachysolen tannophilus NRRL Y... [more]
A0A1R0GS83_9FUNG7.300e-4434.36Endonuclease n=1 Tax=Smittium mucronatum TaxID=133... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1014contigP-littoralis_Contig1014:70932..76641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHV3
Preferred nameNUC1
PFAMsEndonuclease_NS
Model size2243
Max annot lvl2759|Eukaryota
KEGG koko:K01173,ko:K08515
KEGG Pathwayko04130,ko04210,map04130,map04210
Hectar predicted targeting categoryother localisation
GOsGO:0000014,GO:0000737,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004527,GO:0004529,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006259,GO:0006308,GO:0006309,GO:0006310,GO:0006401,GO:0006725,GO:0006807,GO:0006915,GO:0006921,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009987,GO:0012501,GO:0016020,GO:0016043,GO:0016070,GO:0016787,GO:0016788,GO:0019439,GO:0019866,GO:0022411,GO:0030262,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097194,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575
Exons7
Evalue3.03e-174
EggNOG OGsCOG1864@1|root,KOG3721@2759|Eukaryota
Descriptionneuron death in response to oxidative stress
Cds size1239
COG categoryF
BRITEko00000,ko00001,ko03029,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1014.10.4prot_P-littoralis_Contig1014.10.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1014 71880..76585 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789354.8591022-UTR-P-littoralis_Contig1014:70931..718791680789354.8591022-UTR-P-littoralis_Contig1014:70931..71879Pylaiella littoralis U1_48UTRP-littoralis_Contig1014 70932..71879 -
1680789354.9540002-UTR-P-littoralis_Contig1014:76585..766411680789354.9540002-UTR-P-littoralis_Contig1014:76585..76641Pylaiella littoralis U1_48UTRP-littoralis_Contig1014 76586..76641 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789354.8701007-CDS-P-littoralis_Contig1014:71879..723501680789354.8701007-CDS-P-littoralis_Contig1014:71879..72350Pylaiella littoralis U1_48CDSP-littoralis_Contig1014 71880..72350 -
1680789354.879293-CDS-P-littoralis_Contig1014:72758..728961680789354.879293-CDS-P-littoralis_Contig1014:72758..72896Pylaiella littoralis U1_48CDSP-littoralis_Contig1014 72759..72896 -
1680789354.8908339-CDS-P-littoralis_Contig1014:73263..734971680789354.8908339-CDS-P-littoralis_Contig1014:73263..73497Pylaiella littoralis U1_48CDSP-littoralis_Contig1014 73264..73497 -
1680789354.9087324-CDS-P-littoralis_Contig1014:73930..740951680789354.9087324-CDS-P-littoralis_Contig1014:73930..74095Pylaiella littoralis U1_48CDSP-littoralis_Contig1014 73931..74095 -
1680789354.9215949-CDS-P-littoralis_Contig1014:74665..747821680789354.9215949-CDS-P-littoralis_Contig1014:74665..74782Pylaiella littoralis U1_48CDSP-littoralis_Contig1014 74666..74782 -
1680789354.930434-CDS-P-littoralis_Contig1014:75705..757921680789354.930434-CDS-P-littoralis_Contig1014:75705..75792Pylaiella littoralis U1_48CDSP-littoralis_Contig1014 75706..75792 -
1680789354.9389837-CDS-P-littoralis_Contig1014:76558..765851680789354.9389837-CDS-P-littoralis_Contig1014:76558..76585Pylaiella littoralis U1_48CDSP-littoralis_Contig1014 76559..76585 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1014.10.4

>prot_P-littoralis_Contig1014.10.4 ID=prot_P-littoralis_Contig1014.10.4|Name=mRNA_P-littoralis_Contig1014.10.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=413bp
MPRKTPLPVVDDSSGGSAIASDFVMPFVKRYGYPDLDQVILPSEEYTSCW
DSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYES
GYDRGHLAPAGDHKTTQAKLTETFLLSNMAPQTPSFNRGYWSDFEEFVRA
LVVPSERSIKAAKATTRAAVAYPNMPSRLKPPFKDIYVITGPLFLPSKEP
AAPAVLNGGVVDADQGDVVEVPSPSADPPASAKWVVKHDIIGNPMQMVAV
PTHFFKVIVAEPYPPPPSEALSTAPTTFVAAFAMPNTTIPNNTDLRNFLV
PLGVLESVSGMRFLGAATSTELSSSTGLLDDDAKVSLDQEALRVRADARV
PPLSGHWGGGAEKGNGKGNSSRRKGKQRAALTDGGGEVADPARSGSRRVF
RHLCTATSCRGL*
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mRNA from alignment at P-littoralis_Contig1014:70932..76641-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1014.10.4 ID=mRNA_P-littoralis_Contig1014.10.4|Name=mRNA_P-littoralis_Contig1014.10.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=5710bp|location=Sequence derived from alignment at P-littoralis_Contig1014:70932..76641- (Pylaiella littoralis U1_48)
GGCAGGACGAACTCGCCGAAGAGCACGCCACGGAGGCTGAGTCTGCAGTG GCTTCGATGCCGAGAAAAACACCGTTGCCAGTTGTAAGTGAACTTCCTCC GCGAACGAATGCAGATTGGTCGATGACGCCGTTTAGCATTTGTCGTTCCT CAACCCGAGAACTCCTTCGTACATTGGAATACCTAGAACTCCGGAGTACT TCGAAGTTTCAATTATGATATCGGTAAGGCGTGCGCATAGAGGTAAGGCA ACCAGTGCTCTTACACCGACTTCGAACGGCTGTGAACCGCGAACGTGCAG CACAGCAGCAGCAGTTTTATTTTCTTATTGAAGGCATCAGCAGTGCAGTT GCCTCCTATTTGGACATGGGGACCCAAATCAAATCTTCTATGAATACAAT GCGCAACTCCTGTATGTAAGCCACGAGCGTAAATACATCTAATTCTCGTA TCATATTTGTTCTGTTTTATTGATGCTCACATTCCCTCATTGCCAACGTC TTGCCCATGATCACAAGTCAGACACAAAGATAGCTTGCTAAAAGAGAGAA ATTAGTGTTCTGTTGCAGCTCTACAAGGATGGCCTGGTGTCGTAGTACCC TGTTACGTTTTGTTGTGGTTGTCCTCCGCAAACCCCAAGGTTGCACGGCG ACTGCTGCGTTGAAATCATTTCTGGTCTCTTGCCCGTTGGCTGCCAGTGT AAGGGCTCTGACAACTACAGTGTACCCACCTCCTGGGCTGAAGTGCGGGG TGGAAGACCAACCCTCTGTATTAACTTTGTGTAGTAGTCTACTGAACGGT TCGACCGACGCGCGCATAAGCAACTCGCACCTCTGCTCTGCTGCACCAGG TGGACGACAGCAGTGGTGGCTCAGCAATAGCGTCCGACTTCGTGATGCCG TTCGTCAAGCGTTACGGCTATCCAGACTTGGATCAGGTGCGATACATGCG GCCTTTGATGATCCGTGCGGTGTCATTCAACAGCTATCAGCCGTAAAGGT GTAGTAAGCGCTTAGAAATGGCGGCGTGGATAGACAAGCAATCCGCGGGC GAAGGATGCTGCCACAACCTCTACCGCAATGCGTGTACGTATGTATGAAC AGCGGCGGTTGGTACAAACCATTCCCACGATAACCCAACCCGTTGTGGCT GCAGCCGCCCGGGTTGGTCTCAAAGATCCAATGTTCATGAATTCGCATGG CGGTTCAACTTTTATCTCACTGTTATTTTCCAAGGGTGTGTTTGGAGGGT ACCCACAGAGCCGTACCGGGGGTAATTACCCTCTGTGAGTACCCTACAGA CGGTTTCTGTGAGTTCTGTGACACCTCAATACCCTACAGAGAATTTTTGT GAGTTCTGTGAACACCCCAATACCCTACAGAAAATTTATGTAAGATCTGC GCACTTTGAATACCTACCCTACAGAGAGTTTGTGTACGGCCAAATACCCT ACAGAAAATTCTGTGAAATTTTCTTACCGGTGTGCGGTTCATCCTGCTTG CTGCCTACCGTATCGTACGCCGCGCAATGTATTTACACACCACGTGACCC CGCAACAATTTTTCAATCTCGTTTATCCCGGAGCAGGAAGAGTACTGGTG CTTTACCGATAAGGGGGATTTGATTGGTCGGCGTTGGAACCTACCGTTTC GTCGAGGGTTTTCCGGGAACGTACTCAGGCATCGTTAACTCTGTTGGTAC CCTCGTCGTTTTAGAGTCGAGGATTGGAAATCGATCCAGGGGGTCTAATG GTATGTATCTCATGCGACCTGCGGTTTTTGGCCATGAAATTGTACAAGTA GAACGTGCTTGTAATACAAATCTAGAGCTGGTCTCATCGAATATTTTATC CCTTCTCAGGTCATTCTGCCTTCAGAAGAGTATACGTCGTGCTGGGATAG CCGCACGCGCAACGCCCGCTGGGTGGTAGAGCGCATCAATCTCAACACTG TGTCCGGCCCAGGGGACAGGAAAAAGGTGCAGACAGTACAGTGCACGAGG TGGATGATCCGCAAGTTGTTGATGTTGTTGTTGTTGCTATTGCTGTCGCA AGTATTTGTTTCGTCGGATTGAGCTGTGCGTAGCAGCAGAAGGGTCCGTC GTCGCCACGAGAGCACCAAATCATGCCGTCATGTTGGTGAACGTTTTTTG TTGTGTCTGCTGAGCGTATTTCACACGGGGATGCTGACAGACGAGAGCCG GCAGGGGTAGCGATGCCGAGCCAAAGTGCTTGGCCTTCGTCGAATTTATG GGTGCATCGTGTACATACATACTTCATCGCAATTCGTTATTTGATTGTGT AGGTGCTGATTTGTTCAACTTCCTTTAACGATATGGCATCCGTTGCTTTA CCGGCATGCCAGGTGACAGCCTTGCTTGTTGCTGTAGGGCGCGGTTATGG ATTTTAGGGGCGGGCTCACCTAGCCTTCGATTGACGGCCGCCCTTCTCGA CTCCCACTGGCCCGCTTTCCTATCCCAAATCGATATTTTTCGGGGGGGTG TTCGGTTGGACTTCCCACCCCCCAACACCAAACCAATACAAGCCAGTCCC CCTTCCGGCCAGACTCGCGGTTGCAGCCGCTTTTTCGGAGCAGCTTATCA GATTTCTACGAGAGTGGCTATGACAGGGGGCACCTTGCACCAGCCGGCGA CCACAAGACGACTCAGGCCAAACTCACGGAAACATTCCTTCTCTCAAATA TGGCGCCGCAGGTGGGTAGACATAGCCGTACTCTTGACGTTAACTAGATG GCAGAAGGTAGGCAAGGCAGCACGGCTAGCTCCCAAGGAGTTTTGATGTC CTGTAGCCGTCTTGACTCAGCGCTACTTGCCGCGCACGTTGAGCAGTGGT GCCTTTAGCCACTCAATACGGTAGTGAATTATGCCGATACGGCAGGAGCG ATCATGTGGTCACCCAGCTTTCCCCCCCCACCGATCCGTCTAAAATTTCG CTTCGGTTTAGTCTGACCTGCAAGCTCACCCCGGTCCCACGCAATTTCTA ACACCCCAAGTTGGGACCACGAACATCCTGTTCTATGCTGATTGCACCCA ACCTGCCTCCTCCCGAAGGCATCTAGTTTCGGTCTCTAGAGGGCTGTACT CGATCGATATGGTCCGGCTTGCCCCCATTACACCCCACACACAGACGCCG AGTTTCAACCGTGGTTACTGGAGCGACTTCGAGGAGTTCGTGCGCGCGCT CGTCGTGCCGTCAGAGAGGTCTATTAAGGCCGCCAAGGCCACAACTAGGG CGGCGGTGGCTTATCCCAACATGCCGTCGCGGCTGAAGCCGCCTTTCAAG GATATTTACGTCATCACGGGCCCTCTCTTTCTGCCTTCCAAGGAACCGGC GGCCCCTGCCGTGCTCAACGGTGGGGTGGTAGCCAGTGAGGATGTTGGTT ACATACGTGCCCCATGTGTGATGTACCGTTTGGGGAGTGTGTGTGTCGCT CTGTGATGGAAATTAAACGCCCCCCTTTTCCTCGCAGCGAGAGGACCACA TCGCAGTGGTGTGTTTTCAGAACAGAGAGTTCAAGGTGGTGACTGGAACA CATTCAGATTATGTCAGTCCAGACGTACATCACATGTCACAACGTCACTT CCAACAATGCAATGTGCTTTCATCTTAGCCCTGCGTTTCGATGGCTCTCT CCCCCTAAATTGTTTTATGGTAGCGACTGTGCCTCTTGTTTCGCTTTGAT CCTCTCTCATTTTCTACTTTTGTCCTTCCTCGCCTAGGCGCAGAGGTTGA TGCCGATCAAGGAGACGTCGTTGAGGTGCCATCGCCCTCAGCTGATCCAC CCGCCTCTGCCAAGTGGGTCGTCAAGCACGACATCATCGGAAACCCTATG CAGATGGTGGCGGTTCCGACTCACTTTTTCAAGGTAACCTTAAGTTGCAC GCAGCTCGGGGCGCGTTGTGATTGAAATCGCGCTGACGCAGACCCCTGAG GTTTTAATGTCACGGATTGAGAGCCATGCCTGGTCGTCGGTAAAGTACGT ACTTCGTATTTTTTATCTTTTGATTAAGCCTGTGGGTAGTGCACAAACAC GAGTAGGTCTCCCTCCCCCTTGCACCGCACAATGACTTCCGCGGGTAGTT GTCGCAGCGCCGCCATCGCCCCCTCTCTCGAAAGCGAGCCTTTGAGGCCA TCCCGGCGATGTTTTGTGGCCGTTTTCACAAACCCGATAAAGCAATCTCC AACTACACCGCCGAAATCATTCCACAAGTCTCACTCACTTCCCCACCCCA CCGCGGCCGCCTACGCCCGTGTACTGTTGCTACCGCCGCAGGTAATTGTT GCCGAACCGTACCCGCCCCCGCCCTCTGAAGCCCTCAGTACCGCTCCAAC GACGTTCGTGGCCGCGTTTGCAATGCCGAACACCACCATCCCGAACAACA CGGACCTGCGCAACTTTCTCGTACCCCTGGGCGTCCTTGAGAGCGTCTCT GGTATGAGGTTCTTGGGAGCGGCGACGAGTACAGAGCTTAGCAGTAGCAC GGGTCTGCTCGACGACGACGCCAAGGTTTCCCTGGACCAGGAGGCGTTGC GGGTGCGGGCGGATGCTAGAGTTCCTCCGCTTTCGGGGCATTGGGGGGGG GGGGCGGAGAAGGGAAACGGAAAGGGGAACAGCAGTAGGAGAAAGGGGAA ACAACGTGCTGCGCTCACAGACGGGGGTGGGGAAGTGGCGGACCCGGCGA GAAGTGGGAGCAGACGGGTGTTTCGACACCTTTGCACCGCCACATCTTGC CGCGGACTTTGATTTTTCGTTTTTCGGTATGAAGGTCCTCTGGCATTCGT TCGTTGAAAATGTGAAAATGTGCGTGCATGTATGTGTGTGGTTTACTATG TTTTTGGGCGGGGGGTTCCCTGGACGTTTTTACTTGCCGTGGCGAGCACG GCCTTCATCAAGTACCCACCACGCCCGCTGCGCCTTTTCCGCGGTTGTAT TCGAAGTCGGGTTGGATGTCAGAGACTATCGTGCTGAGATCGTGGTGCAT TTATATTGCGCTGATTGTTTTGGATAAAAAAATAGTCGGGAGGCAGGGAA GCTCCTCTCTTCTAGCGCAGGAATCTTGTTCGAGCAAAGTGTTGTGAAAA GGTGCGGGCGGGACATCTGATGGCCGCCATCGTTTGTTTCTTGATGAGTT TGATTTTTCGAAAGGGCGTTTGTTTTCTGCTCGGAGCTCTCAGTTTCTGT GTGTATGTGTAAACGTGTGCTGCAGGGAATACGTGCGCTTTTGTAGAGCA GAATTGCAGTTGTAAGGGGCGTCCGTGGCTCCTGCATTTGAGAGTTCTTG TTCATGCATGCTACAGTTTTTTGTTGTCCAGGCGTGGAGTGATTGCTGTC GCTTTCGTCTCGGCTCTCCCACGTTGCATCGGTGTGTTTGAGATACGTTT CCTATAACATTCCAGGCTATTATATTGCGAGCTGAACCGGTTGAAGTGCA TGAGACTTGCAAGACAGCGTCTTTTTGGTTTCTTTGATGTGGCCGACCCC AGAAGAAGCTACGTGCACTAAAAAAGAAAATGTTCTCTGATGCGCGCAAT GCAGGTAAAGGCAGCAGGGGAGATGGTATGGCAAGGCAACACTCCACAAA AACATTTGCGGTGCAAATCGTTGGACTAAGATGCACGACCAACATGCGGT GAGGCCGTCTACTGCCTTCTGTAGGGATAAATGACAAACGGAAACACGGA TGTAGAATAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1014:70932..76641-

>mRNA_P-littoralis_Contig1014.10.4 ID=mRNA_P-littoralis_Contig1014.10.4|Name=mRNA_P-littoralis_Contig1014.10.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1239bp|location=Sequence derived from alignment at P-littoralis_Contig1014:70932..76641- (Pylaiella littoralis U1_48)
ATGCCGAGAAAAACACCGTTGCCAGTTGTGGACGACAGCAGTGGTGGCTC
AGCAATAGCGTCCGACTTCGTGATGCCGTTCGTCAAGCGTTACGGCTATC
CAGACTTGGATCAGGTCATTCTGCCTTCAGAAGAGTATACGTCGTGCTGG
GATAGCCGCACGCGCAACGCCCGCTGGGTGGTAGAGCGCATCAATCTCAA
CACTGTGTCCGGCCCAGGGGACAGGAAAAAGTCCCCCTTCCGGCCAGACT
CGCGGTTGCAGCCGCTTTTTCGGAGCAGCTTATCAGATTTCTACGAGAGT
GGCTATGACAGGGGGCACCTTGCACCAGCCGGCGACCACAAGACGACTCA
GGCCAAACTCACGGAAACATTCCTTCTCTCAAATATGGCGCCGCAGACGC
CGAGTTTCAACCGTGGTTACTGGAGCGACTTCGAGGAGTTCGTGCGCGCG
CTCGTCGTGCCGTCAGAGAGGTCTATTAAGGCCGCCAAGGCCACAACTAG
GGCGGCGGTGGCTTATCCCAACATGCCGTCGCGGCTGAAGCCGCCTTTCA
AGGATATTTACGTCATCACGGGCCCTCTCTTTCTGCCTTCCAAGGAACCG
GCGGCCCCTGCCGTGCTCAACGGTGGGGTGGTTGATGCCGATCAAGGAGA
CGTCGTTGAGGTGCCATCGCCCTCAGCTGATCCACCCGCCTCTGCCAAGT
GGGTCGTCAAGCACGACATCATCGGAAACCCTATGCAGATGGTGGCGGTT
CCGACTCACTTTTTCAAGGTAATTGTTGCCGAACCGTACCCGCCCCCGCC
CTCTGAAGCCCTCAGTACCGCTCCAACGACGTTCGTGGCCGCGTTTGCAA
TGCCGAACACCACCATCCCGAACAACACGGACCTGCGCAACTTTCTCGTA
CCCCTGGGCGTCCTTGAGAGCGTCTCTGGTATGAGGTTCTTGGGAGCGGC
GACGAGTACAGAGCTTAGCAGTAGCACGGGTCTGCTCGACGACGACGCCA
AGGTTTCCCTGGACCAGGAGGCGTTGCGGGTGCGGGCGGATGCTAGAGTT
CCTCCGCTTTCGGGGCATTGGGGGGGGGGGGCGGAGAAGGGAAACGGAAA
GGGGAACAGCAGTAGGAGAAAGGGGAAACAACGTGCTGCGCTCACAGACG
GGGGTGGGGAAGTGGCGGACCCGGCGAGAAGTGGGAGCAGACGGGTGTTT
CGACACCTTTGCACCGCCACATCTTGCCGCGGACTTTGA
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