Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 166 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 162 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789354.4640765-CDS-P-littoralis_Contig1013:16516..16598 | 1680789354.4640765-CDS-P-littoralis_Contig1013:16516..16598 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1013 16517..16598 + |
| 1680789354.4799218-CDS-P-littoralis_Contig1013:21142..21222 | 1680789354.4799218-CDS-P-littoralis_Contig1013:21142..21222 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1013 21143..21222 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1013.2.1 >prot_P-littoralis_Contig1013.2.1 ID=prot_P-littoralis_Contig1013.2.1|Name=mRNA_P-littoralis_Contig1013.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=54bp
PSFFLHRVRELLDLGDQPVDMSYYGPQALFCCIPLLSVFPYVLSLPHPLP
MICS back to topmRNA from alignment at P-littoralis_Contig1013:16517..21224+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1013.2.1 ID=mRNA_P-littoralis_Contig1013.2.1|Name=mRNA_P-littoralis_Contig1013.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4708bp|location=Sequence derived from alignment at P-littoralis_Contig1013:16517..21224+ (Pylaiella littoralis U1_48)
CCGAGCTTCTTCCTCCATCGCGTACGTGAGCTCCTCGATCTCGGTGACCA
GCCAGTCGACATGTCTTACTACGGACCCCAAGGTCAGATACCCTGCTTTT
GCATGCGTATACGGGGCATAATGAGACTCTGTCATGCGTGTCCAGCCTTT
AGCTCTGCATAGCGGCGGCATGTAACAGAGTACTCTATGAGTTGGTGTTT
GCGTTCCAGAACGAGGCAGAACAGAGACTCGCTGCCTCGCTCGACATATA
TACCCACTGGCTGCTCATAACATGGTGTCTAATCCGAGGAAAGTTTGCTC
ACGCAATGCGCGCGACTACACACCTAACATGGTGTCTAATCCGAGGAAAG
TTTGCTCACGCAATGCGCGCGACTACACACCTAACATGGTGTCTAATCCG
AGGAAAGTTGTATGCCCACGCGATACGCGCGACTACACACCTATCATGGT
GTCTAATCCGAGGAAAGTTGTATGCTCTCGCGATGTACACGCCTGTGCTC
ATGTGCTTGGTTGCCGCGTCTGCTCAAATAGCTTTTTGTTCTTTTTTAGT
TTTATCCGCATTTCTAGGGTCGCCCGTGATACTAGTATTTACTACAAAAT
AAATGCTGCTTTTTCCCGCCGTATTTTTATTTTCACATCTATCTGGAGTC
CGTCCTGTCTTTGTACAGCGGTATGACTTTCGACGTCTTTGCACTTCGCA
CTGCTGTATGTGAAGCACGCTGAGAGCCCGGAGCTCTGCGTATGTCTTGC
CCGTCTTTGCACGGCTGTGAACTGCTGTATGCATGTGATAGCCTGCTGAT
TGATGATGCTCGTACGGTGGACAGAGATTTTTTTTTACCATGATATCGTA
CATACTCCGTAGTATGTCTGCCTTATTTTTTTTACTGCTGCTGTACCCCA
CAAATAAATGTTGCTGCGCGCCTGTTGCTATTTTTGAGTGTGTGTACGCA
TGTGTATATGCCCGCGGGTGAATGGGGTTCCATGCTGATGTGGTGCTGGT
ATCACCTGGGAGAGACGTGTGAAGTGTCATGGTGTTGGTAACACCTGGCG
ATAATTCCATGGAGATGGAAGGGAGGCACCGGGACCTTATGGGGTTAGGC
ACGCTCTGATAAGCTCGTGCTCTGAGAATCTATGTCGCCGTATGACGAAA
GCCGGCAATTTTTTATAGGCGTTAAAGTCGAGGCATATGACATTTGACTA
TCACCACGTAGCCGAGGCTTAGCACCCCAAGGTAAGAGGTATGTCCCGAT
CCACTATCACATCAGCTCAGTCTACCCCGAGCGGTGGACAGATATCCTCC
GGTTGAGTATATATATGTGTGCTGTGGGTACAGCGCTTCAGGTATACCGT
ACATGCCCCGCAGCTGCACCGGTTCGCGCTGTGGTTTCAGGCAGGTGTAT
TCCGACATCCATTTTGTTTTCTTCGCACTATAAAAGACTACACACTAAAC
TAAATAGACCTTGAACTTGTATTTTTTTCCCATGTTTTCTATCTTCCGAC
ATGTATTTTTTTTTCTCTTGATATTCTACACGGAATACAACAGACTGGTT
TATGATACGATTAACCAAAATACATCCTTGAACATTTTTTTACATGCAGT
GCCGCCGATCTGCCTTCTGTAATGTACGACTTTTTTTTTGTGTGCCCTCT
GGGTCCCTTGTGGCCCTTCGTGCTTTCTAAACACTAATCTTTTCCTGCTG
TACGACTTTTTCTTTTGTTTCTTTTTTGCCCTGGGTCCCTTGGCCCCTCG
TTTTATTTATTGTTCCTTTTTGACTTTACTATTTTTATGAACACTTTTCG
TTCGTCTTCTAGGACGATACATAGTTTTTTTTTATTTTTGATTCATCCTG
CATGATCTGTGCTTTATTTCACTACATGATCTTTTGATCTATTTCCCTTT
TACCCTTGATGCGTCCCAAAGTTTTCGCCTACCTCACAGCAGTGCTGTTA
CTGAAGTACTTGTACTTGGAATATATACATCTGGAATTAATTTTTCTTCG
TCTTCCCTATTTCGTCCCGCCTTGAAGGTTGAATTTTGTTTTGTTTTGTT
TTTCCATTTTTTTTTTCCAGGATTGATAAAGTATGCTCGACCCAGGAAAG
TCCCAGGTATATGAGAGCTGCCTTCTTCCTGTCGTTGCCGTTTTCATTTT
TATTATATTCCTTGAGAATCTGTGTGTATTGAGTTTTTTCAAAGTTAACA
ACCAAGACTACTACTGCTGTACTCGTATATTATTACTCAGAGCAACAGCA
GTAAAATATCATTGCGATTTTATATCGTACTTTGTCGTGCACGCACGTTA
AACTTACCGTTCCTTCTTGTTTTTTTTTTTCCACTCTCTGAAACAACAGC
AGATCGCGCACTGAATGGCGCACACCTAAACTTTCACCCGATAATTATGC
TTCATGATTTCCCTTCTATTTTGTTTTTCTCCTGTCCCAACAATTGTTTT
TTTCTTGTAAGTTGTTGCTTTGCCTGCCTGGGTTTTCAGTTTACTCTTCC
TTTTCTTCGATGATAATGTTGATTGGAATGCTAGTGCACCGCTACGTCGC
TATGAATGTTTTTTTTCTTCCTTCTGCCTTGACGTGCGAGTCTCTTTTCT
TGCATGCTCCTTGCCAGGACTCTGTATGCTCGACTAAACAGGTTACAGGT
GGATGAGAGCTACTTTTTCCCTGTTGTTGTACTTGTTTTTTTTGTTTTGT
TTCTTCCGTCTCAGGGTCTCTCCGTTTGGTTTGCTTTCGGCGTGTCGTGT
TTCCGTCTTTCTCTTTAACTTGGAGTGCACTGTATGTCGTATGATGTTTA
CCAGGGATGAATGCATGCTCGATCCCAAGAGTTGAAGGTATATGAGAGCT
GACTTCGCCCCTGTTGttTTTTTTCTTTCTTCGTTTTGTTCTCCTCTATT
TTTTTTGTGTCTTCCCCTTCCACTTGATTGAGGTCGCCGCGATAAAATGC
CTAAACACCCGAATCTACACACAGCAGCAGCTATTATTCTTCTTTGTTTT
TGACAGCAGCTATGTCATATATATTTTGTTGTTTATTTTTTCGTTTCTAT
TTTGGTTTTGCTGCCTTTGTCTTGCTTGGTTTATTCCTGAGTTGTGTGTT
TTATCTGGGTTTGTTTCCTCTCTTGGGTGCTTTGAAAATGTCTTGTAtTT
TTTTCTTTTCGTTGTTGGTTTACTGCGGAATACATGTGTGTTTCGATAAT
GGTGATGATCTTATTCTTTTTATTTTGTGATTTTGTTGTGCAAATATCAA
TAAACATCGTACGAAGTATATTTTATCGACTCGCTTGGTTTGATTTCTCT
TTCTCTTGCGAAGTTTGGTTTGCAGGTTGGTTTGTTCGACCCCAGGAAGT
GTACACAGGTGACTGAGAGCAGCCTTCCTTTGTTTATTTTTCTTTTATGC
ATTATATTATGAGTCTCGTTTTTTTTTGTTTTAATACATACAGTCGTTTT
TGTTTCGTTTTCATTTTCCTTATTCGCTTCTTGTTGTTTTTTGTTCGTCT
TCTTTTCCCGTCATTTATGTGTGCATGCAGGTTGGTACGTTCGACCCGGA
AAGTATTGAGGTGATTGAGAACTACCTTTCCTTTGTTTCAATACTCTTGT
TTGAATCGACCTCGTCTTCTTTGTTTTCGGCTTGTATTTTTTTGTTCACT
TCGTCTCTGGTTTTATCATACTATCCCTGGCTACATAAATTTTTCTCTTC
GTAATAGGCCAAACAGCCACTCACTTCCGTGTACTGCATAGCACGTTCTT
GACAACACGGAAAATGCGACGACAGACAAGTTATTTTTCTACTTTTTTTT
CTTTCTTCTGGTCTCTTCATTACGTGCCAAACAGCCACTTTAGTGTACTG
CATGGCACATTCTTGACAACAAGGAATGCGACGATGGTATTATTTTTTTC
AATATTATTCTTGATCGTTCAAAGTTGTTTTCGTATGAATGACGCAGCAG
TATTGCATATTACATTCCTCATGGCGTTCCATATGTGCCAAACAGCCACT
TGCGTGTACTGCATGACACCTTCTGGAACCCATGGAATGGCAGACCGATG
TCTTGACTGttTTTTTCTCTTCTGTGCCTTCTCAATTACAGCGGCTTGCA
TACTTTGTTCCATGTTTTTTTTCCGGGGCGGGTCATGCATGCCGCATGTT
CTGACAAGTGCATCAGACGGCTAGAACCTGCGTGCACATGCTCGCGTACT
GCAGTTGCAGCAAACACAGCAAAGGCGCACCATACGCCCAGTACCGTCCA
TTGGTTTTGGGTGTATGTTTGCCGTCGCTACTGCTGCTGCTGTGCTGCTC
CCGCTGTTTCTTCGGCTGTTGCTGCCGCTTCTGCTGTTGCCTCTTCTCTT
CCGTCTGCCCTGTCTATCTGCCTGTTCGTCCGTCTTCCTGTCGTTGCTAT
CGGCTCTGTCCAGTGTGTCTGCTAGCCGTCTGGCAGTTCTGTTTTATCCG
TTCGCCTGTCAATTACCAGGTGGCTGGTAGTTGCTGGTCTGCAAGTTCAC
CGAGTGGCCTGTCTCTCCCGCCAGCGTTGGGCCGCCATGTCGTTGCCGCT
GCCTGTTCCGTCTTGTTGCCACATCGCGTTACCTGCTCGCCCTTTTCTGT
TGTTACGGCCCGCCGCTGCCTGCTAGCTTTGTTTTGTTGCATTCCGCTGC
TGTCGGTGTTCCCGTACGTCCTCTCGCTGCCCCATCCCTTGCCGATGATA
TGCTCCAT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1013:16517..21224+ >mRNA_P-littoralis_Contig1013.2.1 ID=mRNA_P-littoralis_Contig1013.2.1|Name=mRNA_P-littoralis_Contig1013.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=162bp|location=Sequence derived from alignment at P-littoralis_Contig1013:16517..21224+ (Pylaiella littoralis U1_48)
CCGAGCTTCTTCCTCCATCGCGTACGTGAGCTCCTCGATCTCGGTGACCA
GCCAGTCGACATGTCTTACTACGGACCCCAAGCTTTGTTTTGTTGCATTC
CGCTGCTGTCGGTGTTCCCGTACGTCCTCTCGCTGCCCCATCCCTTGCCG
ATGATATGCTCC back to top
|