mRNA_P-littoralis_Contig1012.6.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5K5P5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P5_9PHAE) HSP 1 Score: 482 bits (1240), Expect = 3.540e-159 Identity = 243/455 (53.41%), Postives = 307/455 (67.47%), Query Frame = 1 Query: 1 KAEKIGDDKFREAYEKVWHLKNHDP--KPKKSQPXXXXGPHDPKGWVLGGLPTDTISPEFLRRNKHKGGPKFSLSSDLRGRLPKVDQQGLSAVRDFVGGKG-------FEEAFPEEYQDIILDETNNYADFCAEHDNPSPHQEPRHVKKKWKKGFQSVPSTTNSAGKVVADFDRDHLYGVIGILITAGLTQERRITDHWGTTSDHDYARVRDCMPRDLFLLFYSRFFHMAAPTGKVDKKDSEYDAKHHVRKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*EPIVY 1338 +A I D FREAYE VWHLK K K PHD +GW G+ D S + RR+KH GG KF L+ L RLPK ++ GL+ +R+F+ GK FEEAFP QD+IL ETN Y +FCAE NPSP Q+PRH KKK + G VPS G V F R HLYGV+GILI+AG+TQ+RR+TDHWG +Y VR CMPRDLF LFY RFFHMA + E+DAKHH+R FE+AL+ WS L + G W+SYDEQMVK TARA +MR+NP+KPIKHG+K + C +G+C++Q IDGGF GD+ LR CPLG TART LHV+L+A + FS+KI +SGVT+AMDNYF SA LLLSLA+RDIF VGTLR R GLDGAM+LW++ + ++G+M+ ARS ++I +I WVDS+ V+L+ +K +F D P++Y Sbjct: 95 RASVIEDQGFREAYESVWHLKKKSTSKKRKAGDAPPQPAPHDERGWTSAGMKKDVESEAYKRRHKHTGGDKFQLTPSLIARLPKPNRTGLNVLRNFIDGKDKSLPFKFFEEAFPPACQDMILTETNKYVNFCAEETNPSPLQQPRHRKKKTRTGLPYVPSEDRPDGSKVYGFHRKHLYGVMGILISAGITQKRRLTDHWGVGDHDNYPLVRKCMPRDLFTLFYCRFFHMAPVIEALSTTHPEHDAKHHIRAFEDALNTCWSSLVELGGWVSYDEQMVKGTARAMHGLMRFNPQKPIKHGIKRFACWCWTGYCYLQSIDGGFYGDMGLRPHDKCPLGRTARTVLHVLLEACEVFSNKINNSGVTVAMDNYFTSAGLLLSLASRDIFAVGTLRGKRSGLDGAMELWQNNEESTKEKGDMIFARS-NDIVIIEWVDSKTVHLMSTKHVFEEDWNPLLY 548
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE) HSP 1 Score: 476 bits (1225), Expect = 1.040e-157 Identity = 240/451 (53.22%), Postives = 307/451 (68.07%), Query Frame = 1 Query: 622 DLFLLFYSRFFHMAAPTGKVDKKDSEYDAKHHVRKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*EPIVYKRRVSGKNGEVMTSEQPIARADYVRNMGGVDVADQRLSSHDHVHKPMTFFWRRVFDQKLQQAISNAYLFFLMWAEVLLAQCKVML------------AERAEGSDAAES-DLTVEELEEFISGLVKMMRTDRKTWDTRLACLLMVKCSVGHENKGARRTRKVVPVYDSKGARSVKVCRGGLCSKHSDPTAHCNSKRARGVCLVRYLQQ*LGE 1935 +LF+LFY RFF++A TGK++K D +YD KHH+RK E+ + WS+L +PGAWLSYDEQMVKSTAR F +MRYN KPIK+G+K W ICCPSG+CFVQ IDGGF GD++LR + CPLG +ART ++V+L+A +TFS+KI+ G+T+AMDN+F A LL LATRDIF VGTLR NR+G++ A LW + M AT+RG+M+ ARS E+ ++ W+DSQ V L+ +K +FA + EP+ Y++R + NGE ++S QP+AR +YV+NMGGVDVADQRL SH H H+PMTFFWRRVFDQK QA+SN +L F WA VL+ QC L E EG AA+S DLTV EL EF + L K M+ +R WD RLA LM C+VGH GARR K Y GA S +VC G C + P + R RG C LG+ Sbjct: 8 NLFVLFYGRFFNLAPATGKLNKDDPQYDCKHHIRKLEDVFNKCWSELVEPGAWLSYDEQMVKSTARVMFALMRYNKAKPIKNGIKCWAICCPSGYCFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDNFFTGAPLLRCLATRDIFAVGTLRGNRIGVELANYLWAKEGMAATERGQMLTARS-DELVIVKWIDSQEVYLMSTKHVFADEWEPLAYEKRAANNNGEKVSSRQPLARKEYVKNMGGVDVADQRLGSHAHKHRPMTFFWRRVFDQKFAQAVSNGWLLFYEWAGVLVTQCTAALEAATQDGGMGDAGEAEEGGVAADSCDLTVAELREFQTLLKKAMKMERVDWDRRLANHLMSLCNVGHTENGARRATKPSESYLVNGACSSRVCHGRGCK--TPPGSPYAGTRTRGACWCDICTNGLGK 455
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5JDZ7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ7_9PHAE) HSP 1 Score: 384 bits (986), Expect = 1.730e-120 Identity = 252/650 (38.77%), Postives = 320/650 (49.23%), Query Frame = 1 Query: 298 FEEAFPEEYQDIILDETNNYADFCA-EHDNPSPHQEPRHVKKKWKKGFQSVPSTTNSAGKVVADFDRDHLYGVIGILITAGLTQERRITDHWGTTSDHDYARVRDCMPRDLFLLFYSRFFHMAAPTGKVDKKDSEYDAKHHVRKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*EPIVYKR-RVSGKNGEVMTSEQPIARADYVRNMGGVDVADQRLSSHDHVHKPMTFFWRRVFDQKLQQAISNAYLFFLMWAEVLLAQCKVML------------------------AERAEGSD-----------------------------------------------------------------------------AAES-DLTVEELEEFISGLVKMMRTDRKTWDTRLACLLMVKCSVGHENKGARRTRKVVPVYDSKGARSVKVCRGGLCSKHSDPTAHCNSKRARGVCLVRYLQQ*LGE 1935 FE+ FP E QD+ L E Y +FCA E D P HQ+PRH KK +GFQ VP + G F R HLYGV+GILITAG+TQ+RRITDHWG VD D E E+ L+ WS+L DPGA LSYDEQMVKSTAR +MR++ GD+++R + CP+G +ART ++V+L+A +TFSDKI+ SGVT+AMDN+F AALL LATRDI+ VGTLR NR G+D A +W + KAT+R +M+ ARS E+ ++ W+ SQ V+L+ +K +FA++ EP+ +R R + NGE ++S QP+AR YV+NMGGVDVADQRL +H H H+PMTFFWRRVFDQKL A+SNA+L F WA VL QC L A+ D AA+S DLTV EL EF S + K M+ +R WD RLA LM CSV H A RT K V Y KGA+S VC GG+C + + + C R R VC LG+ Sbjct: 3 FEKTFPTEAQDVGLRE--GYVNFCADESDPPLEHQKPRHRAKKVTRGFQMVPYKDLADGSREYAFKRKHLYGVMGILITAGITQKRRITDHWG-----------------------------------VDFHDKE---------LEDVLNKCWSELVDPGACLSYDEQMVKSTARVMLALMRFS-------------------------------GDIKVRPYASCPIGKSARTVMYVLLEACETFSDKIIGSGVTVAMDNFFTGAALLQCLATRDIYAVGTLRGNRTGVDLANYIWSREGTKATEREQMLKARS-DELVIVKWIGSQEVHLMSAKHVFAAEWEPLTLERKRAADNNGEKVSSSQPLARKKYVKNMGGVDVADQRLGAHAHTHRPMTFFWRRVFDQKLSHAVSNAWLLFYEWAWVLATQCTAALEAATQHGGAGDXXXXXXXXXXXXXGAAADSCDLTVAELXARITPMTFFWRRVFDQKLSHAVSNAWLLFYEWAWVLATQCTAALEAATQHGGAGDXXXXXXXXXXXXXXAAADSCDLTVAELREFQSLVKKAMKVERVDWDRRLANHLMSLCSVCHTETRASRTTKPVETYSVKGAKSSLVCYGGICEETAK-ASRCTGSRTRVVCWCDTCTDGLGK 573
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5KPD8_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD8_9PHAE) HSP 1 Score: 337 bits (865), Expect = 1.450e-106 Identity = 157/285 (55.09%), Postives = 205/285 (71.93%), Query Frame = 1 Query: 487 FDRDHLYGVIGILITAGLTQERRITDHWGTTSDHDYARVRDCMPRDLFLLFYSRFFHMAAPTGKVDKKDSEYDAKHHVRKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*EPIVYK 1341 F+R HLY V G DH G + +Y VR CMPRDLF+LFY RFFH+A TGK++K D +YD KHH+RK E+ L+ WS+L +PGAWLSYDEQMVKSTAR +MRYN KPIKHG+K W ICCPSG+ FVQ IDGGF GD++LR + CPLG +ART ++V+L+A +TFS+KI+ G+T+AMDN+F A LL LATRDIF VGTLR NR+G++ A+ LW + M AT+RG+M+ ARS E+ ++ W+DSQ V L+ +K +FA + EP+ Y+ Sbjct: 29 FERKHLYSVTGXXXXXXXXXXXXXXDHCGVEAHDNYPMVRACMPRDLFVLFYGRFFHLAPATGKLNKDDPKYDCKHHIRKLEDVLNKCWSELVEPGAWLSYDEQMVKSTARVMLALMRYNKAKPIKHGIKCWAICCPSGYSFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDNFFTGAPLLGCLATRDIFAVGTLRGNRIGVELAIYLWAKEGMAATERGQMLTARS-DELVIVKWIDSQEVYLMSTKHVFADEWEPLAYE 312
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5KG44_9PHAE (DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG44_9PHAE) HSP 1 Score: 335 bits (859), Expect = 1.720e-106 Identity = 156/256 (60.94%), Postives = 200/256 (78.12%), Query Frame = 1 Query: 721 RKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*EPIVYKRRVSGKNGEVMTSEQPIARADYVRNMGGVDVADQRLSSHDHVHKPMTFF 1488 R+ E+ L+ WSKL +PGAWLSYDEQMVKSTARA F +MR+N KPIK G+KGW ICCPSG+CFVQ IDGGF GD++LR CPLG +ART L+V+L+A TFSDKIV SG+T+AMDN+F A+L+ LATRDIF VGTLR NR G+D A LW + +KAT+RG+M+ ARS E+ ++ W+DSQ V L+ +K +F + P+ Y+RR + NGE ++S+QP+AR +YV+NMGGVDVADQRLS+H H H+PMTFF Sbjct: 3 RELEDLLNECWSKLVEPGAWLSYDEQMVKSTARAMFALMRFNKTKPIKTGIKGWAICCPSGYCFVQSIDGGFSGDIKLRPHATCPLGRSARTVLYVLLEACPTFSDKIVGSGITVAMDNFFTGASLVRCLATRDIFAVGTLRGNRTGVDLAKHLWDKEGLKATERGDMLTARS-DELVIVKWIDSQEVYLMSTKHVFEDEWAPLAYERRAANNNGEKVSSQQPLARKEYVKNMGGVDVADQRLSAHAHTHRPMTFF 257
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5JC56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC56_9PHAE) HSP 1 Score: 320 bits (820), Expect = 3.450e-99 Identity = 176/396 (44.44%), Postives = 218/396 (55.05%), Query Frame = 1 Query: 364 FCA-EHDNPSPHQEPRHVKKKWKKGFQSVPSTTNSAGKVVADFDRDHLYGVIGILITAGLTQERRITDHWGTTSDHDYARVRDCMPRDLFLLFYSRFFHMAAPTGKVDKKDSEYDAKHHVRKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*EPIVYKRRVSGKNGEVMTSEQPIARADYVRNMGGVDVADQRLSSHDHVHKPMTFFWRRVFDQKLQQAISNAYLFF 1548 FCA E D P HQEPRH KK +GFQ+VP + G F+ HLYGV+GILITAG+TQ RRITDHWG +Y VR CMPRDLF+LFY RFFH+A T G+K W CCPSG+CFVQ IDGGF GD++LR CP+G +ART ++V+L+A +TFSDKI+ SGVT+AMDN+F AALL LATRDIF V T R NR G+D + +W + MK T+RG+M+ S +R + NGE ++S QP+AR ++V+NMGGVDVADQ L +H H H+PMTFFWRRVFDQK QA+SNA+ F Sbjct: 54 FCADESDPPLEHQEPRHRAKKVTRGFQTVPYRDLADGSREYAFEHKHLYGVMGILITAGITQNRRITDHWGMELHDNYPLVRACMPRDLFVLFYGRFFHLAPATTATTTS-----------------------------------------------------------GIKCWAGCCPSGYCFVQSIDGGFSGDIKLRPHASCPIGKSARTVVYVLLEACETFSDKIIGSGVTVAMDNFFTGAALLRYLATRDIFAVRTPRGNRTGVDLSNYIWSKEGMKVTERGQMLRPARTSS-------------------------------KRAADHNGEKVSSSQPLARKEHVKNMGGVDVADQWLGAHAHTHRPMTFFWRRVFDQKFSQAVSNAWFLF 359
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5KGW0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW0_9PHAE) HSP 1 Score: 307 bits (787), Expect = 3.390e-95 Identity = 153/291 (52.58%), Postives = 198/291 (68.04%), Query Frame = 1 Query: 835 MRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*EPIVYKRRVSGKNGEVMTSEQPIARADYVRNMGGVDVADQRLSSHDHVHKPMTFFWRRVFDQKLQQAISNAYLFFLMWAEVLLAQCKVMLAERAE----------------GSDAAESDLTVEELEEF 1659 MR+N KPIK G+KGW ICCPSG+CFVQ IDGGF D+++R C LG +ART L+V+L+A TFSDKIV SG+T+AMDN+F A++L LATRDIF VGT R NR G+D LW + +KAT+RG+M+ ARS E+ ++ W+DSQ V L+ +K +F + P+ Y+RR + NG+ + S QP+AR +YV+N+GGVDVADQRLS+H H H+PMTFFW RV DQK QA+SNA+L F WA VL QC L + G+ A DLTV EL+EF Sbjct: 1 MRFNKAKPIKTGIKGWAICCPSGYCFVQSIDGGF-SDIKVRPHATCRLGRSARTVLYVLLEACPTFSDKIVGSGITVAMDNFFTGASVLRCLATRDIFAVGTRRGNRTGVDLVKHLWDKEGLKATERGDMLTARS-DELVIVKWIDSQEVYLMSTKHVFEDEWAPLAYERRAANNNGDKVPSHQPLARKEYVKNIGGVDVADQRLSAHAHTHRPMTFFWGRVLDQKFAQAVSNAWLLFFEWAGVLATQCTAALEAATQDGGVGDXXXXXXXXXXGAVAGSCDLTVAELQEF 289
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE) HSP 1 Score: 325 bits (832), Expect = 1.330e-92 Identity = 197/525 (37.52%), Postives = 275/525 (52.38%), Query Frame = 1 Query: 130 WVLGGLPTDTISPEFLRRNKHKGGPKFSLSSDLRGRLPKVDQQGLSAVRDFVGGKG-----------FEEAFPEEYQDIILDETNNYADFCAEHDNPSPH--QEPRHVKKKWKKGFQSVPSTTNSAGKVVADFDRDHLYGVIGILITAGLTQERRITDHWGTTSDHDYARVRDCMPRDLFLLFYSRFFHMA---AP---TGKVDKKDSEYDAKHHVRKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQI---------------------FA------------SD*EPIVYKRRVSGKNGEVMTSEQPIARADYVRNMGGVDVADQRLSSHDHVHKPMTFFWRRVFDQKLQQAISNAYLFF 1548 W G+P + + +R + + SLS+ R +LP +D D + G F+ FP+E D+ +D+TN Y + C P ++ V+K G ++P F+R H+YG++GI IT GLT++ R+ HW + DY VR+CM RDLF L Y RF H + AP G+ + E+D+K H+R+ E+ L++AW++ D WL YDEQMVK+ + ++MR++PKKPI HGMK + IC G+CFV +DGG GD +LR + DCPLG T R LHV+L A K F DKI SG IAMDNYF S L LA+ DIF VGT RSNR G GA+ + D + +RGEM AR+ +A + W+DS+ + L S I FA S P ++ R +G+ G+ + +QP R DYV NMGGVD ADQ+ SH H HK T WRRV + K +Q +N ++ F Sbjct: 578 WTDRGIPDFAGTDDHKKRTQRETVSAASLSASAREKLPSLD-----TFMDSLDESGKFPLHGSMMTCFDMMFPDEAIDLFVDKTNKYVNLCTTPSLPGAKDTRKAHQVEKTRTLGMVTLPEPA---------FERKHIYGMLGITITMGLTKKTRMRKHWSRSLHDDYPLVRECMSRDLFELLYCRFIHCSDGNAPPRWAGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNQWLCYDEQMVKTVSTFAHYLMRHSPKKPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGAYIAMDNYFKSPTLFECLASHDIFAVGTCRSNRTG--GAVPYLQSLDRRPVERGEMHFARA-GNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDSDGGDDHFAPLPYRCFVCPLPSRPHPFMFSLRKAGQAGKSLELQQPWMRKDYVANMGGVDTADQQNGSHTHDHKSYTNHWRRVMEGKFEQTFTNIFVMF 1085
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5JHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH7_9PHAE) HSP 1 Score: 309 bits (792), Expect = 1.450e-92 Identity = 225/662 (33.99%), Postives = 278/662 (41.99%), Query Frame = 1 Query: 10 KIGDDKFREAYEKVWHLKNHD-PKPKKSQPXXXXGPHDPKGWVLGGLPTDTISPEFLRRNKHKGGPKFSLSSDLRGRLPKVDQQGLSAVRDFVGGKGFEEAFPEEYQDIILDETNNYADFCAEHDNPSPHQEPRHVKKKWKKGF------QSVPSTTNS-----AGKVVADFDRDHLYGVIGILITAGLTQERRITDHWGTTSDHDYARVRDCMPRDLFLLFYSRFFHMAAPTGKVDKKDSEYDAKHHVRKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*EPIVYKRRVSGKNGEVMTSEQPIARADYVRNMGGVDVADQRLSSHDHVHKPMTFFWRRVFDQKLQQAISNAYLFFLMWAEVLLAQCKVMLAERAEGSD------------------AAES-DLTVEELEEFISGLVKMMRTDRKTWDTRLACLLMVKCSVGHENKGARRTRKVVPVYDSKGARSVKVCRGGLCSKHSDPTAHCNSKRARGVC 1902 KI D+ FR A E VWHLK PKPK +P P DPKGW GLP D S RR+K GG FSLS L+ L K D+QGL+ +R FV KG F + ++T E + V + G+ +S P + A KV DF R T W + + CMP H + E+ L+ WS+L DPGA LS+DEQMVKSTAR F +MR+N KPIK G+K W ICCPSG+CFVQ IDGGF GD++L+ + CP+G +ART + D NGE ++S QP+AR +YV+NMGGVDVADQRL +H H+PMTFFWRRVF QK QA+SNA+L F WA VL QC V L + + AA+S DLTV EL EF S + K M+ +R WD RLA LM CSVGH GARRT K V +Y KGA+S VC GG C + + + R RGVC Sbjct: 26 KIEDEGFRRAQESVWHLKRIKLPKPKAGEPPPSPIPDDPKGWGFEGLPRDESSDPCKRRHKIPGGDTFSLSDQLKPSLSKADKQGLAVLRSFVSEKGGGLPF------MFFEKTFP--------------MEAQDVVLREMNGYVNFCADESDPPLEHQEPRHRAKKVTRDFRRCR-------------------TRTWRMDLESTPSSASTCMP--------------------------------HNGELEDVLNKCWSELVDPGACLSHDEQMVKSTARVMFMLMRFNKSKPIKLGIKCWAICCPSGYCFVQSIDGGFSGDIKLKPYATCPVGKSARTVVKRAAD------------------------------------------------------------------------------------------------------------------NGEKVSSSQPLARKEYVKNMGGVDVADQRLGAHARTHRPMTFFWRRVFAQKFSQAVSNAWLLFYEWAGVLAKQCTVALDAATQDGEVGDXXXXXXXXXXXXXXAAADSCDLTVAELREFQSLVKKAMKVERVDWDRRLANHLMSLCSVGHTETGARRTAKPVEMYSVKGAKSSLVCYGGHCEETAKASRRYKGSRTRGVC 502
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Match: A0A6H5KMF5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF5_9PHAE) HSP 1 Score: 295 bits (756), Expect = 1.250e-87 Identity = 177/473 (37.42%), Postives = 254/473 (53.70%), Query Frame = 1 Query: 565 HWGTTSDHDYARVRDCMPRDLFLLFYSRFFHMAAPTGK-----VDKKDSEYDAKHHVRKFEEALSHAWSKLADPGAWLSYDEQMVKSTARANFFIMRYNPKKPIKHGMKGWCICCPSGFCFVQYIDGGFLGDLQLRGFKDCPLGNTARTALHVVLDARKTFSDKIVDSGVTIAMDNYFASAALLLSLATRDIFTVGTLRSNRVGLDGAMKLWKDKDMKATKRGEMVMARSPSEIAVITWVDSQVVNLLWSKQIFASD*E--------PIVYKRRVSGKNGEVMTSEQPIARADYVRNMGGVDVADQRLSSHDHVHKPMTFFWRRVFDQKLQQAISNAYLFFLMWAEVLLAQCKVMLAERAEGSDAAESDLT-VEELEEFISGLVKMMRTDRKTWDTRLACLLMVKCSVGHENKGA---RRTRKVVP---VYDSKGARSVKVCRGGLCSKHSDPTAHCNS----KRARGVCLVR 1911 HW ++ +Y VR+ M RDLF L YSRF H + P + + EYD+K H+R E+ L+ AWS+ D G WL YDEQMVK+ + + + +NP KPI HGMK + +C +G+C + IDG F GD LR +DCPLG T R LHV+L+ +T K+V SGV IAMDNYF S L LA+ +IF VGT RS R GA+ + + G+M RS E+A + W DS+ + L + I + E P+ + G G+ +QP+ R DYV+ MGGVD ADQ+ SH H H+ T WRRVFD K+ Q ++N +L F MW +L+++ V++ DA + V+EL + L ++ + +R WD L+ +LM +C+VG KG R + + P V+ S +S +VC CSK + C + RGV + + Sbjct: 29 HWSESAHDNYPLVREFMQRDLFELLYSRFLHCSDPNAPPRQLPTGEDNPEYDSKWHIRDLEKILNCAWSENVDLGQWLCYDEQMVKTASTFSKGLAHFNPAKPITHGMKLYAVCDRNGYCLINSIDGSFKGDPSLRSLEDCPLGKTTRHVLHVLLEECETLRGKLVGSGVFIAMDNYFTSPTLFACLASHEIFAVGTCRSPRTC--GALPYIQSLERTTPNPGDMTFCRS-GEMAFVQWRDSKEILLCSTVHIGETGEEGGDINHFKPVPLALKGKGWAGKHKEHDQPVMRMDYVKYMGGVDRADQQNESHYHDHRSYTNHWRRVFDAKIMQMLTNNFLLFRMWVRLLMSEVDVLM-------DAHNTPFEEVQELADVKKELERLSKRERVDWDEELSEILMRRCNVGTIRKGGKVPRSSERQQPRGKVWGSVEIKSHRVCMDPACSKRTLKGCTCEEFCTFEGQRGVLMCK 491 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1012.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1012.6.1 >prot_P-littoralis_Contig1012.6.1 ID=prot_P-littoralis_Contig1012.6.1|Name=mRNA_P-littoralis_Contig1012.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp MPRDLFLLFYSRFFHMAAPTGKVDKKDSEYDAKHHVRKFEEALSHAWSKLback to top mRNA from alignment at P-littoralis_Contig1012:26250..31726+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1012.6.1 ID=mRNA_P-littoralis_Contig1012.6.1|Name=mRNA_P-littoralis_Contig1012.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5477bp|location=Sequence derived from alignment at P-littoralis_Contig1012:26250..31726+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1012:26250..31726+ >mRNA_P-littoralis_Contig1012.6.1 ID=mRNA_P-littoralis_Contig1012.6.1|Name=mRNA_P-littoralis_Contig1012.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=711bp|location=Sequence derived from alignment at P-littoralis_Contig1012:26250..31726+ (Pylaiella littoralis U1_48)back to top |