Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 1 |
Model size | 255 |
Hectar predicted targeting category | no signal peptide or anchor |
Exons | 2 |
Cds size | 174 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680789354.1991928-UTR-P-littoralis_Contig1012:14645..14725 | 1680789354.1991928-UTR-P-littoralis_Contig1012:14645..14725 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1012 14646..14725 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680789354.2104602-CDS-P-littoralis_Contig1012:14725..14728 | 1680789354.2104602-CDS-P-littoralis_Contig1012:14725..14728 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1012 14726..14728 + |
1680789354.2220228-CDS-P-littoralis_Contig1012:16127..16298 | 1680789354.2220228-CDS-P-littoralis_Contig1012:16127..16298 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1012 16128..16298 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1012.4.1 >prot_P-littoralis_Contig1012.4.1 ID=prot_P-littoralis_Contig1012.4.1|Name=mRNA_P-littoralis_Contig1012.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=58bp
MVFFFLNLPTHQCVRLSPDKDLEQILQRTQRVKYVYQCFYTQQPVYRCSS PEGIRLNK back to topmRNA from alignment at P-littoralis_Contig1012:14646..16298+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1012.4.1 ID=mRNA_P-littoralis_Contig1012.4.1|Name=mRNA_P-littoralis_Contig1012.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1653bp|location=Sequence derived from alignment at P-littoralis_Contig1012:14646..16298+ (Pylaiella littoralis U1_48) TATATTTCAAATTGATCCTATCGGCAACCGCTTTCGTTCAAGCCGCTCCT
CGGTAGGTTTTGTGGAATACCCACCGAGATATGGCATGTCGCAATTTTAC
GGCAAAGTCGCCTCTCACTCTCAATGAAATAGTTCGCTCTCAATCTGGCG
AATACTCTGTTTTAACCTTTTACCCGATGGCTGAGCAGTCTTCTCCTTCA
CACTATACTGTAGTGTTTGTTTTCAGGTTTGTTGGTCTTTATTTTCATGT
AATAACACGGGATTCTGAAAAATGGGATCGAATTTCAAAAATGGGAACCA
GCTTTTTTTTTTCTGTTTGAATCCTCCACAAGGTATCACCCTCTAGGTAC
CTTCGAAGGCCATCTATGCCCAAGTAGCATTGCTGCCCGAGTTGTTGTCG
AGGTGGCTTCACGAGGATTTACTGCGTACCTGTGTGGGACCCATCACAAC
GTCTATTAGTGCCATCAACTCTGAAAATGATACATAGCAGTAAGTATTTA
TTTCCAGCAGAAAAGTGACGGCCATCCTTGACTTCACGATCCTTCAAAGG
TAAATGATTTTTGAGGTACACAAATTTGAAATCAAAGTCAAGGATGGTTG
TCACTTTTCAAGTTGACTGGAAAATAATACTGCTATCATTTTCAGAGTTA
ATGGCACTAATAGACGCTGTGATGGGTCCAACACAGGTACGCAGTAAATC
CTATTGACGCCACCTCGACAACTACTCGGGCAGCAATCAATGCTACTTGG
GCATAATAGATGGCCTTCGAAGGTGCCTAGAGGGTGAGGGTGGCTCTTGT
CAAATTGGTGACCGTATTCAAAATCAAAAACAAACTTGGATTTTGATTCT
GATTCCGTGTTGGGTCCGATCTGCTGCAGCTTTCGTTTGTCCAAAATCAA
AAGCGGATAAAAAAAAGAGGGGTCACAGACAGACAGGTGGTGTGTGATAT
GAGCATGCCGTGTCTCGATTCTAAGACAAGTGCGGGAGCTGTCGTGCCTC
AAACGAAGAGCACGATGGTGCCCCACGTCGCCCTGATTCAGGCGCGTTGG
TAGTTCTTTGTTTGGGATCGATAACCGAAAAACTCGGCAAGAGATGAGTA
AGTATACGTGTTGCATATCTGCCATTTTTTGGAGGTAGCGGCTGTGTCAG
CCACGCAAACAAACAGCAGTTGAGCAACAAACTTCCTGCACACTTCTACA
CACACACTTGAGTGCTGCTCTCCGAATTCTGGTCGGAATTCGCTCAAACA
AAGTGATCTGTATTCTGCGTAATACCAGCTTTCTCCGGAGCTAGCACATG
TGCACAGCCTGGGTCTACACGTTGTGCTGTGGCCAGCTAAGCAAACGTAC
GGAGTGTGCACCATGTGCTCCCGGAATGCACAGCAAACACCTCTCTGTCT
CATATTCTAGGTCTCTTCGTTTTTGAGCCAGCCGCGTTTTTGATCTATTG
GCGGGAAGAAACGTGTTTTTACTTTCCTTCCCGTTTTTTTTTTTTTAAAC
TTACCAACACATCAATGTGTTCGTCTCTCTCCAGACAAGGATCTCGAGCA
GATATTGCAACGAACACAAAGAGTGAAATACGTCTACCAGTGTTTCTATA
CTCAACAACCAGTGTACCGTTGCAGCTCCCCTGAGGGTATCAGGCTCAAC
AAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1012:14646..16298+ >mRNA_P-littoralis_Contig1012.4.1 ID=mRNA_P-littoralis_Contig1012.4.1|Name=mRNA_P-littoralis_Contig1012.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=174bp|location=Sequence derived from alignment at P-littoralis_Contig1012:14646..16298+ (Pylaiella littoralis U1_48) ATGGTTTTTTTTTTTTTAAACTTACCAACACATCAATGTGTTCGTCTCTC TCCAGACAAGGATCTCGAGCAGATATTGCAACGAACACAAAGAGTGAAAT ACGTCTACCAGTGTTTCTATACTCAACAACCAGTGTACCGTTGCAGCTCC CCTGAGGGTATCAGGCTCAACAAG back to top
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