mRNA_P-littoralis_Contig1011.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1011.2.1
Unique NamemRNA_P-littoralis_Contig1011.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 7.260e-94
Identity = 194/365 (53.15%), Postives = 206/365 (56.44%), Query Frame = 1
Query:    1 TDIDRGYGDTNQTPLMVASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHLAVSK*LIEGGVDLEARPGGFMVDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHRLEIAVQNGHLKVVRELVQRSGIDSCACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVKLLLRTGWDRQ------------------------QKYACLRQHDLRYSHAPRFARYLLEPRADTTSDARFPYDSDEGEEEDR--GTPLELATSYSCRFSPNMRVHREFVGELKGVMRLLQQVEAVHAVSLPWPSDTGR 1017
            TDIDR  GDTN TPLMVASV  SSRVV+DLLRQ   VSVADS+ YTALHHSVYH+HLAVS  LIE G DLEARPG                                                            LRA ANPL L AYGS  L  AV NGHLKVV ELV   G D C  DGG L L    S  HVDIV+FLCDAGVVDTE VALCAA+EGCSE CV LLLR                              Q+   +   +L   HAPRFAR LLE  AD TS  RFP DSDEGEE++   GTPLELATSY  RFSP MRVHRE V  LKGV+RLL+Q EAVHAVS  WP DTGR
Sbjct:   19 TDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXLRANANPL-LSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSP-MRVHREMVRGLKGVIRLLRQEEAVHAVSWTWPIDTGR 375          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.370e-87
Identity = 187/365 (51.23%), Postives = 204/365 (55.89%), Query Frame = 1
Query:    1 TDIDRGYGDTNQTPLMVASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHLAVSK*LIEGGVDLEARPGGFMVDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHRLEIAVQNGHLKVVRELVQRSGIDSCACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVKLLLRTGWDRQ------------------------QKYACLRQHDLRYSHAPRFARYLLEPRADTTSDARFPYDSDEGEEEDR--GTPLELATSYSCRFSPNMRVHREFVGELKGVMRLLQQVEAVHAVSLPWPSDTGR 1017
            TDIDR  GDTNQTPLMVASV  SSRVVRDLLRQ   VS+ADS+ Y ALHH+VYHKHLAVSK LIE G DL+ARPGG       DTPLHVA   GF + M                                         NPL L A                   ELV   G D C  DGGAL L    S N VDIV+FLCDAGVVDTE VALCAA+EGCSE CV LLLR    +                         Q+   +   +L   HAPRFAR LLE  AD TS  RFP DSDEGEE++   GTPL+LATSY  RFSP MRVHRE V  LKGV+RLL+Q EAVH+VS  WP DTGR
Sbjct:  409 TDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGI------DTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPL-LSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSP-MRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGR 765          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.720e-78
Identity = 181/365 (49.59%), Postives = 198/365 (54.25%), Query Frame = 1
Query:    1 TDIDRGYGDTNQTPLMVASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHLAVSK*LIEGGVDLEARPGGFMVDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHRLEIAVQNGHLKVVRELVQRSGIDSCACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVKLLLR-------TGWDRQ-----------------QKYACLRQHDLRYSHAPRFARYLLEPRADTTSDARFPYDSDEGEEEDR--GTPLELATSYSCRFSPNMRVHREFVGELKGVMRLLQQVEAVHAVSLPWPSDTGR 1017
            TDIDR  G TNQTPLMVASV  SSRVVRDLLRQ   VSVADS+ YTALHH+VYHKHLAVSK                                                                            A ANPL L AYGS  L +AV +GHL+VVRELV   G D C  DGGAL L    S  HVDIV+FLC+AGVVDTE VALCAA+EGCSE CV LLLR       TG                     Q+   +   +L   HAPRFAR LLE  AD TS  RFP DSDEGEE++   GTPL+LATSY  RFS  M+VHRE V  LKGV+RLLQQ EAVH+VS  WP DTGR
Sbjct:  440 TDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPL-LSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFS-TMKVHREMVRGLKGVIRLLQQEEAVHSVSWTWPIDTGR 796          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 3.000e-64
Identity = 152/360 (42.22%), Postives = 202/360 (56.11%), Query Frame = 1
Query:    1 TDIDRGYGDTNQTPLMVASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHLAVSK*LIEGGVDLEARPGGFMVD---VNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHRLEIAVQNGHLKVVRELVQRSGIDSCACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVKLLLR-------------TGWDRQQKYACLRQHDLRYSHAPRFARYLLEPRADTTSDARFPYDSDEGEEEDRGTPL---ELATSYSCRFSPNMRVHREFVGELKGVMRLLQQVEAVHAVSLPWPSDTGRPT 1023
            T+IDR   +   T LM A+     R+VR LLR    VSV+  + +TALH ++  ++LAV+K LI+ G ++EA+     ++   V   TPLH+A   GF EGMV LI+A ANV S M DG+T  + AA  G LEAV +L +  ANPL L    +H L+IA   GHL VV+ELVQR GID CA +G    L+    +NH  I++FL DAGV+DT+  ALC A+EG +E C+KLL+              T  D  ++   L        HAPR  R+LL+  ADT +  RF     EG  E    PL   ++   +   +  +  V R  V  LKGV+RLLQQ  AVHA S  WP+DT R T
Sbjct:   42 TEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPL-LRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNARENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGI---EGLGEMIDEPLVAAKITLRHEQTYFKDADVDR--VDGLKGVVRLLQQEAAVHANSWAWPTDTDRAT 395          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 8.860e-61
Identity = 170/413 (41.16%), Postives = 185/413 (44.79%), Query Frame = 1
Query:    1 TDIDRGYGDTNQTPLMVASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHLAVSK*LIEGGVDLEARPGGFMVDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHRLEIAVQNGHLKVV-RELVQRSGIDSCACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAV-----------------------------------------------EGCSETCVKLLLR-------TG---------------WDRQ--QKYACLRQHDLRYSHAPRFARYLLEPRADTTSDARFPYDSDEGEEEDR--GTPLELATSYSCRFSPNMRVHREFVGELKGVMRLLQQVEAVHAVSLPWPSDTGR 1017
            TDIDR  GDTNQTPLMVASV   SRVVRDLLRQ   VSVADS+ YTALHH+VYHKHLAVSK                                                                                   L AYGS  L I           RELV   GID C  DGGAL L    S  HVDIV+FL DAGVVDTE VALCAA+                                               EGCSE CV LLLR       TG               +D    Q+   +   +L   HAP FAR LLE  AD TS  RFP DSDEGEE++   GTPL+LATSY  RFS +M VHRE V ELKGV+RLL+Q EAVH+VS  WP D GR
Sbjct:   25 TDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFS-SMSVHREMVPELKGVIRLLRQEEAVHSVSWTWPIDNGR 429          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.090e-54
Identity = 150/347 (43.23%), Postives = 183/347 (52.74%), Query Frame = 1
Query:   49 VASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHLAVSK*LIEGGVDLEARPGGFM-VDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHRL--EIAVQNGHLKVVRELVQRSGIDSCACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVKLLLRT-GWDRQ---QKYACLRQHDLR---YS------------------HAPRFARYLLEPRADTTSDARFPYDSDEGEEEDRGTPLELATSYSCRFSPNMRVHREFVGELKGVMRLLQQVEAVHAVSLPWPS 1005
            VAS     RVVR LLR    VS AD++  TALH S+ +KHLAVSK L++ G DLEAR      + V C TPLHVA   GF++GMVMLI A                          V+  + A ANP+ L AY    L  ++A +NG L VVREL QR GID C+CDGGA  L    S N VDIV+FL D GVVD E +ALCAAVEG  E C++LLLRT G +     + YA +  HD     YS                  ++PR  R LL   AD  S  R  Y+  EG+     TPL +A S    +        +    LKGV+RLL+QV+AVHA S  WPS
Sbjct:   37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGC-TPLHVAAAKGFHKGMVMLIHA-------------------------GVKGFVGAKANPI-LAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANM-THDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVR--YEGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCWPS 353          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 2.190e-53
Identity = 113/171 (66.08%), Postives = 120/171 (70.18%), Query Frame = 1
Query:    1 TDIDRGYGDTNQTPLMVASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHLAVSK*LIEGGVDLEARPGGFMVDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHRLEIAVQNGHLKVVRELVQR 513
            T IDRG GDTNQTPLMVASV  SSRVVRDLLRQ   VSVADS+  TALHHSVYH HLAVSK LIE G DLEAR GG       DTPLHVA   GF +GM +L+D      S +DDGATP F AASDG LEAVRVLLRA ANPL L A GS  L +AV N  L   R L +R
Sbjct:   19 TGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGK------DTPLHVAATKGFCQGMKLLMD------SRLDDGATPLFLAASDGRLEAVRVLLRANANPL-LSACGSLPLYMAVYNRPLVRNRSLYKR 176          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.760e-47
Identity = 134/358 (37.43%), Postives = 175/358 (48.88%), Query Frame = 1
Query:    1 TDIDRGYGDTNQTPLMVASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHLAVSK*LIEGGVDLEARPGGFMVD---VNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHRLEIAVQNGHLKVVRELVQRSGIDSCACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVKLLLR-------------TGWDRQQKYACLRQHDLRYSHAPRFARYLLEPRADTTSDARFPYDSDEGEEEDRGTPLELATSYSCRFSPNMR-VHREFVGELKGVMRLLQQVEAVHAVSLPWPSDTGRPT 1023
            T+IDR   +   T LM A+     R+VR LLR    VSV+  + +                           +      D   V   TPLH+A   GF +GMV LIDA ANV S M +G+T  + AA  G L+AV++LL+  ANP+ L    +H L+IA   GHL VV+ELVQR G+D C+ +G    L+    +NH  I++FL DAGV DT+  ALC A+EG SE C+KLL+              T  D     A +        +APR  R+LL+  ADT    RF     +G  E  G PL  A         +      E V  LK V+RLL+Q +AVHA S  WP DT R T
Sbjct:   29 TEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPM-LCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSACDNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEI---KGLGEIAGGPLVAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAWPIDTDRAT 382          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.380e-29
Identity = 115/351 (32.76%), Postives = 164/351 (46.72%), Query Frame = 1
Query:   37 TPLMVASVTCSSRVVRDLLRQKGGVSVADSNEYTALHHSVYHKHL-AVSK*LIEGGVDLEARPGGFMVDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHR-----LEIAVQNGHLKVVRELVQRSGIDSC-ACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVKLLLRTGWDRQQKYAC------LRQHDLR------------YSHAPRFARYLLEPRADTTSDARFPYDSDEGEEEDRGTPLELATSYSCR---FSPNMRVHREFVGELKGVMRLLQQVEAVHAVSLPWPS 1005
            TPLM+A     SR+ + L+++   VS+AD   +TALH     +   A+ K L + G DL+A     ++      PLH A  +              N   ++ DG+T    AA +G +  +R LLR  ANPL +            L++A ++GH  VVREL+Q  GI+ C A   GA  L    S+ H+DI++ L +AGVVDT      AA  G  E  VK LLR    R ++  C      L   D+             +S APR  R L++  ADTTS  +    + +G      TPL   T    R    +      +E +  L+ + RLL +V+AVHAVS  WPS
Sbjct:  141 TPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDA-----IIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMG-HEASVKFLLR---HRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVM--NLKGGVVFNDTPLAF-TKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPS 479          
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.600e-25
Identity = 95/291 (32.65%), Postives = 138/291 (47.42%), Query Frame = 1
Query:  187 LIEGGVDLEARPGGFMVDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDGWLEAVRVLLRAIANPLFLPAYGSHR-----LEIAVQNGHLKVVRELVQRSGIDSCA-CDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVKLLLRTG-WDRQQKYACLRQHDLRYSH----------APRFARYLLEPRADTTSDARFPYDSDEGEEEDRGTPLELATSYSCRFSPNMRVHREFVGELKGVMRLLQQVEAVHAVSLPWPSD 1008
            L+E G  LE      +      TPL +A +NG    M  L++A AN+ S   DGATP F AA +G ++AVR+LL A  +PL  P  G+       L++A   GHL+VV EL+++ GI  C    GG   L     + H+D+++ L +AGVVDT    L           +++ +  G  +    + C+ +H  R              PR  R L+E  ADTTS    P D   G +      L +   +     P   +  E +  L+ + RLL +VEA+HAVS  W SD
Sbjct:    2 LVEAGAPLEVATKQQLC-----TPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDT---GLARGRRIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTS--TVPIDGLPGTDNITPMGLTMLLLHDLGTEP---LTEEQLNALEAIHRLLLRVEALHAVSWLWSSD 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1011.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JHQ8_9PHAE7.260e-9453.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE1.370e-8751.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE1.720e-7849.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSL5_9PHAE3.000e-6442.22Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A6H5L5L0_9PHAE8.860e-6141.16Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNS0_9PHAE3.090e-5443.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH66_ECTSI2.190e-5366.08EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LP44_ECTSI1.760e-4737.43EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FT11_ECTSI1.380e-2932.76EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FXY7_ECTSI1.600e-2532.65EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1011contigP-littoralis_Contig1011:12659..13751 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog654926.Q8QNQ8_ESV1K
Model size1023
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010941,GO:0016032,GO:0019048,GO:0019050,GO:0019054,GO:0033668,GO:0035821,GO:0039526,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044531,GO:0044532,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0060548,GO:0065007
Exons2
Evalue6.43e-53
EggNOG OGs4QB1T@10239|Viruses,4QUVA@35237|dsDNA viruses no RNA stage
Descriptionaspartic-type endopeptidase activity
Cds size792
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789353.786865-UTR-P-littoralis_Contig1011:12658..128891680789353.786865-UTR-P-littoralis_Contig1011:12658..12889Pylaiella littoralis U1_48UTRP-littoralis_Contig1011 12659..12889 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789353.7998827-CDS-P-littoralis_Contig1011:12889..134071680789353.7998827-CDS-P-littoralis_Contig1011:12889..13407Pylaiella littoralis U1_48CDSP-littoralis_Contig1011 12890..13407 +
1680789353.811091-CDS-P-littoralis_Contig1011:13477..137511680789353.811091-CDS-P-littoralis_Contig1011:13477..13751Pylaiella littoralis U1_48CDSP-littoralis_Contig1011 13478..13751 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1011.2.1prot_P-littoralis_Contig1011.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1011 12890..13751 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1011.2.1

>prot_P-littoralis_Contig1011.2.1 ID=prot_P-littoralis_Contig1011.2.1|Name=mRNA_P-littoralis_Contig1011.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=264bp
MVDVNCDTPLHVAVMNGFYEGMVMLIDADANVGSEMDDGATPRFFAASDG
WLEAVRVLLRAIANPLFLPAYGSHRLEIAVQNGHLKVVRELVQRSGIDSC
ACDGGALVLDAVTSDNHVDIVSFLCDAGVVDTEDVALCAAVEGCSETCVK
LLLRTGWDRQQKYACLRQHDLRYSHAPRFARYLLEPRADTTSDARFPYDS
DEGEEEDRGTPLELATSYSCRFSPNMRVHREFVGELKGVMRLLQQVEAVH
AVSLPWPSDTGRPT
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mRNA from alignment at P-littoralis_Contig1011:12659..13751+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1011.2.1 ID=mRNA_P-littoralis_Contig1011.2.1|Name=mRNA_P-littoralis_Contig1011.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1093bp|location=Sequence derived from alignment at P-littoralis_Contig1011:12659..13751+ (Pylaiella littoralis U1_48)
ACCGACATTGACCGAGGCTATGGTGATACTAACCAGACACCGCTGATGGT GGCCTCTGTGACATGTTCCTCGCGCGTTGTTAGAGACCTTCTGAGGCAGA AAGGCGGCGTCTCCGTAGCGGACAGCAATGAGTATACTGCTCTGCACCAC TCGGTGTATCACAAACACCTTGCTGTTAGCAAATAGCTGATCGAGGGGGG AGTGGACCTTGAAGCGAGGCCCGGTGGCTTTATGGTGGATGTCAATTGTG ATACACCACTTCACGTGGCCGTGATGAACGGGTTCTACGAGGGAATGGTG ATGCTGATCGACGCAGATGCGAATGTTGGCAGCGAGATGGACGACGGGGC GACACCTCGTTTCTTCGCGGCAAGCGACGGGTGGCTGGAAGCGGTCAGGG TTCTCCTTCGGGCGATTGCGAATCCGCTCTTCTTGCCCGCGTACGGCAGT CACCGGCTAGAAATCGCGGTTCAAAATGGGCATTTGAAAGTGGTCCGCGA ACTTGTGCAGCGGTCTGGAATCGACAGTTGTGCCTGTGACGGTGGCGCGC TGGTTCTCGATGCGGTCACTTCTGATAATCACGTAGATATAGTTTCATTT CTGTGTGACGCGGGTGTGGTAGACACGGAGGATGTGGCTCTGTGTGCTGC CGTTGAGGGCTGTAGCGAGACGTGTGTCAAGCTGCTGCTACGGACAGGGT GGGACCGCCAACAAAAGTACGCGTGCTTACGTCAACATGACTTACGGTAG TCTCCCATCCACCTACCATGAATACTTATTCCAATAAACTCCCCTTGTGA ATACATTCAAGCTGAAAAGCTCTCATGCTCCCAGATTCGCGCGCTATCTT CTTGAACCCAGGGCGGACACCACATCGGACGCTCGGTTTCCATACGACAG TGATGAGGGGGAGGAGGAAGACCGCGGCACGCCCCTGGAGTTAGCCACAT CCTATTCTTGCAGATTTAGTCCAAACATGAGAGTCCACCGTGAGTTCGTG GGCGAGCTGAAGGGTGTCATGCGCTTGCTGCAGCAGGTGGAGGCAGTCCA TGCGGTCTCCTTGCCGTGGCCAAGCGACACCGGTCGTCCTACA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1011:12659..13751+

>mRNA_P-littoralis_Contig1011.2.1 ID=mRNA_P-littoralis_Contig1011.2.1|Name=mRNA_P-littoralis_Contig1011.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=792bp|location=Sequence derived from alignment at P-littoralis_Contig1011:12659..13751+ (Pylaiella littoralis U1_48)
ATGGTGGATGTCAATTGTGATACACCACTTCACGTGGCCGTGATGAACGG
GTTCTACGAGGGAATGGTGATGCTGATCGACGCAGATGCGAATGTTGGCA
GCGAGATGGACGACGGGGCGACACCTCGTTTCTTCGCGGCAAGCGACGGG
TGGCTGGAAGCGGTCAGGGTTCTCCTTCGGGCGATTGCGAATCCGCTCTT
CTTGCCCGCGTACGGCAGTCACCGGCTAGAAATCGCGGTTCAAAATGGGC
ATTTGAAAGTGGTCCGCGAACTTGTGCAGCGGTCTGGAATCGACAGTTGT
GCCTGTGACGGTGGCGCGCTGGTTCTCGATGCGGTCACTTCTGATAATCA
CGTAGATATAGTTTCATTTCTGTGTGACGCGGGTGTGGTAGACACGGAGG
ATGTGGCTCTGTGTGCTGCCGTTGAGGGCTGTAGCGAGACGTGTGTCAAG
CTGCTGCTACGGACAGGGTGGGACCGCCAACAAAAGTACGCGTGCTTACG
TCAACATGACTTACGGTACTCTCATGCTCCCAGATTCGCGCGCTATCTTC
TTGAACCCAGGGCGGACACCACATCGGACGCTCGGTTTCCATACGACAGT
GATGAGGGGGAGGAGGAAGACCGCGGCACGCCCCTGGAGTTAGCCACATC
CTATTCTTGCAGATTTAGTCCAAACATGAGAGTCCACCGTGAGTTCGTGG
GCGAGCTGAAGGGTGTCATGCGCTTGCTGCAGCAGGTGGAGGCAGTCCAT
GCGGTCTCCTTGCCGTGGCCAAGCGACACCGGTCGTCCTACA
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