mRNA_P-littoralis_Contig1010.15.6 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI) HSP 1 Score: 323 bits (828), Expect = 1.070e-104 Identity = 169/289 (58.48%), Postives = 206/289 (71.28%), Query Frame = 1
Query: 1 AGSSTYDFA-YGSAVSGDGSFYVAGKTSGPFDGAAEIVGWYDMVVAKFDSDGNFLWSWQDGTERDDALRCAVATDDGGVVVGGYTYGTYDGVASEGPEDFVALKLDSDGNVEWIWQDGSDEDDYMQACTLTADGNVVLAGYTNGEWLGSKPGASAIAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDDSLVLVGSTTGDYSGTTENAGETDFVVVKLTAGGVLEWTWQ 864
AGSS D A YG + +GSF++AGKT+G DG G DM V K DSDG LWSWQ+GT +D + A ATDDGGVVVGGY+ GT GV SEG DF+A+K DSDG EW WQ+G+++D+ + C+ TADGNVVL G T G+W + G A+ AVKLD++DGSV+W YQAGV +Y V + GAA R+DGS+V+ G T+G W E G DF +VALDEDG ELWR+QDGS FS S+ GVAALSD S+VL G+T GDY+GT NAG DF VVKLT GVL+WTWQ
Sbjct: 13 AGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGT--NAGAQDFAVVKLTEEGVLDWTWQ 299
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE) HSP 1 Score: 316 bits (809), Expect = 1.000e-99 Identity = 160/284 (56.34%), Postives = 198/284 (69.72%), Query Frame = 1
Query: 13 TYDFAYGSAVSGDGSFYVAGKTSGPFDGAAEIVGWYDMVVAKFDSDGNFLWSWQDGTERDDALRCAVATDDGGVVVGGYTYGTYDGVASEGPEDFVALKLDSDGNVEWIWQDGSDEDDYMQACTLTADGNVVLAGYTNGEWLGSKPGASAIAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDDSLVLVGSTTGDYSGTTENAGETDFVVVKLTAGGVLEWTWQ 864
++D+ YG + +GSF++AG T G DG G DM K DSDG LW WQ+G+ DD L A ATDDGGVV G+ GT +GV SEG DF A+K DSDG EW WQDG+++D+ + C+ TADGNVVL G T G+W+ + G A+ AVKLD+TDGSV+W YQAGV +Y V + GAA R+DGS+V+ G T+G W E G DF +VAL+EDG ELWR+QDGSEFS S+ GVAALSD S+VL G T GDY+ T NAGE DF +VKLT GVL+WTWQ
Sbjct: 21 SHDYVYGVSADAEGSFFLAGTTEGSLDGITFNAGGTDMAAGKLDSDGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVILTCSKTADGNVVLTGMTQGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELTGYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAALSDGSVVLAGVTDGDYAET--NAGEQDFALVKLTEEGVLDWTWQ 302
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI) HSP 1 Score: 286 bits (732), Expect = 1.140e-90 Identity = 147/247 (59.51%), Postives = 178/247 (72.06%), Query Frame = 1
Query: 124 MVVAKFDSDGNFLWSWQDGTERDDALRCAVATDDGGVVVGGYTYGTYDGVASEGPEDFVALKLDSDGNVEWIWQDGSDEDDYMQACTLTADGNVVLAGYTNGEWLGSKPGASAIAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDDSLVLVGSTTGDYSGTTENAGETDFVVVKLTAGGVLEWTWQ 864
M K DSDG LWSWQ+GT +DAL A ATDDGGVV G+ GT +GVASEG DF+A+K DSDG EW WQDG++ D+ + C+ TADGNVVL G T G+W+ + G A+ AVKLD+TDGSV+W YQAGV + V + G+A R+DGS+V+ G T+G W E G TDF VALDEDG ELWR+QDGS S S+ GVAALSD S+VL G+T G+Y+GT NAG DF VVKLT GVL+WTWQ
Sbjct: 1 MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGT--NAGAQDFAVVKLTEEGVLDWTWQ 245
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 192 bits (487), Expect = 1.160e-51 Identity = 120/273 (43.96%), Postives = 153/273 (56.04%), Query Frame = 1
Query: 25 AYGSAVSGDGSFYVAGKTSGPFDGAAEIVGWYDMVVAKFDSDGNFLWSWQDGTERDDALRCAVATDD-GGVVVGGYTYGTYDGVASEGPEDFVALKLDSDGNVEWIWQDGSDEDDYMQACTLTADGNVVLAGYTNGEWLGSKPGASA-IAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEG--VWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDDSLVLVGSTTGDYSGTTENAGETDFVVVKL 831
AYG A S GS G T + A VG YD + K D DGN LW WQDGT D L V+ D+ G V++ G T + G S G DFVA+KLDS G W WQDG+ D +QA T DG VVLAGYT GEW G G AAVKLD +G+ VW +Q G + + + + DG+V+L G T G V D+++G++D V L DG+E+WRW+ GS +RG+AA SD +V+VGS G + G N G DF+VV L
Sbjct: 102 AYGVAASDSGSVVAVG-TINDGEWATPSVGGYDFIAYKVDGDGNLLWKWQDGTIGFDILWAVVSADEEGSVIMAGMTSLDFSG-PSVGSLDFVAIKLDSGGTTLWTWQDGTSSSDEIQAAAATGDGFVVLAGYTFGEWSGGLTGEECDFAAVKLD-ANGTEVWRWQGGYEVEYNVIYAVSVQEDGTVLLAGRTGGSQVMSDKRVGSSDIATVMLGADGQEIWRWKQGSSSDDFMLRGMAAGSDGRMVMVGSINGSWGGE-PNLGSEDFLVVLL 370
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI) HSP 1 Score: 174 bits (440), Expect = 5.100e-47 Identity = 122/312 (39.10%), Postives = 161/312 (51.60%), Query Frame = 1
Query: 4 GSSTYDFAYG-SAVSGDGSFYVAGKTSGPFDGAAEIVGWYDMVVAKFDSDGNFLWSWQDGTERDDALRCAVAT--------------------DDGGVVVGGYTYGTYDGVASEGPEDFVALKLDS-DGNVEWIWQDGSDEDDYMQACTLTADGN-VVLAGYTNGEWLGSKPGASA-IAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDD-SLVLVGSTTGDYSGTTENAGETDFVVVKLTAGGVLEWTWQ 864
G+S D YG +AV GD SF +AG+T G D A G +D + KF DG W Q GT D A A + +++ G+T G +DG AS G DFVA+ + S DG+ W WQDG++EDD + G+ VVLAG T G+W + G AAVKL+ DGS +W +Q G ++ + A D +VVL G TEG G + G TD V LD DG LWRWQ G+ + S + AA+++D S+V+ G T G + G+ NAGE D VVVKL G W WQ
Sbjct: 14 GTSGTDNLYGVAAVGGDDSFVLAGRTQG--DWAETNEGDFDFMAVKFAQDGTEQWRLQAGTPETDTFHDAAAVTSSPSTVANMAATGTSAAGDESTAIILAGFTKGGWDGAASAGGSDFVAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDG-SSGDDTLKSVAAAEDDTVVLAGYTEGSLGGDNAGETDCAVVKLDADGGVLWRWQGGT--AESDVCSAAAVAEDGSIVVAGYTVGSWGGSEANAGEDDLVVVKLDKDGNELWHWQ 320
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI) HSP 1 Score: 152 bits (385), Expect = 2.860e-38 Identity = 111/297 (37.37%), Postives = 151/297 (50.84%), Query Frame = 1
Query: 1 AGSSTYDFAYGSAVSGDGSFYVAGKTSGPFDGAAEIVGWYDM--VVAKFDSDGNFLWSWQDGTERDDALRCAVATDDGGVVVGGYTYGTYDGVASEGPEDFVALKLDSD-GNVEWIWQDGSDEDDYMQACTLTADG-NVVLAGYTNGEWLGSKPGASAIAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGS-VVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDDSLVLVGS---TTGDYSGTTENAGETDFVVVKLTAGGV-LEWTWQ 864
AG++ D+ + DGS +AG + G ++G + K D+DGN LW WQ D A A + VV G+ G ++G G DF A+ LD+D G + W WQDGS+ D + TL +G +VV+AGYT+G + G G++ A+KL+ TDGS VW +Q G T + A +DG+ VLVG T+G W + G DF V LD DG E WRWQDG+ + GVA D S++L G TTGD S F +KL A G + W WQ
Sbjct: 10 AGTAETDYLNAVLMGSDGSSVLAGLSFGLWNGTNADTSDASLRPAATKLDADGNILWKWQ----HDINAFAAAAGEGRSVVTAGFASGGWEGTGL-GFVDFTAVSLDADSGELLWKWQDGSEGFDVIYGATLADEGESVVMAGYTSGNFSGVNAGSNDFVAIKLNFTDGSEVWRWQDG-TDEWDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDVDGNESWRWQDGTT-EQEWLVGVAVQDDGSILLAGQQMETTGDES--------VFFTALKLQADGEEVTWRWQ 291
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: A0A6H5JF09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE) HSP 1 Score: 149 bits (376), Expect = 2.490e-37 Identity = 104/269 (38.66%), Postives = 131/269 (48.70%), Query Frame = 1
Query: 127 VVAKFDSDGNFLWSWQDGTERDDALRCAVAT--------------------DDGGVVVGGYTYGTYDGVASEGPEDFVALKLDS-DGNVEWIWQDGSDEDDYMQACTLTADGN-VVLAGYTNGEWLGSKPGASA-IAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDDSLVLVGSTTGDYSGTTENAGETDFVVVKLTAGGVLEWTWQ 864
+ KF DG W Q GT D A A + +V+ G+T G ++G AS G DFVA+ L S DG+ W WQDG++EDD + G+ VVLAG T G+W + G AAVKL+ DGS +W +Q G ++ + A D +VVL G T+G G G TD V LD DG LWRWQ G+ S V A D S+VL G T G + G+ NAGE D VVVKL G W WQ
Sbjct: 1 MAVKFAQDGTEQWRLQAGTPETDTFHDAAAASGSPSTVATMAATGTSAAGDESTAIVLAGFTKGGWNGAASAGGSDFVAVSLASGDGSRLWSWQDGTEEDDVLVGLVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDG-SSGDDTLKSVAAAEDDTVVLAGYTDGSLGGVNAGETDCTVVKLDADGGVLWRWQGGTAESDVCSATVVA-EDGSIVLAGYTVGSWDGSEANAGEEDLVVVKLDKDGNELWHWQ 267
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: A0A6B0ZJZ0_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZJZ0_9ACTN) HSP 1 Score: 136 bits (342), Expect = 2.650e-33 Identity = 98/284 (34.51%), Postives = 133/284 (46.83%), Query Frame = 1
Query: 19 DFAYGSAVSGDGSFYVAGKTSGPFDGAAEIVGWYDMVVAKFDSDGNFLW-------SWQDGTERDDALRCAVATDDGGVVVGGYTYGTYDGVASEGPEDFVALKLDSDGNVEWIWQDGSDEDDYMQACTLTADGNVVLAGYTNGEWLGSKPGASAIAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDDSLVLVGSTTGDYSGTTENAGETDFVVVKLTAGGVL 849
D G +V+ DGS YV G T G F AA G D+ +A+FD+DGN LW +W G + A T GYT T D G D A + D++GN +WI G+D D+ Q L DG + + GYT G GS G + A ++ DGS+ W Q G T G +G +++ G TEG + G D + V+LD G ELWRWQ G+E + S + +V+ G+T G +G GE D V+V L GG L
Sbjct: 136 DSPLGVSVAPDGSIYVGGFTEGDF--AAANQGSADVWLARFDTDGNELWRRQFGGPAWDRGFDVXXXXXXAYIT--------GYTASTLDPETGLGGFDGFAARYDAEGNQQWIRHIGTDATDWGQGSALAPDGGLYMTGYTEGALSGSHAGDKDVFAARIH-ADGSLAWTTQLG-TAALDWTQGVGAGPEGGMLIAGSTEGALAADHSGERDMIVVSLDAGGNELWRWQGGTEGMDTAFE--VRQSGEFIVVTGTTAGSLAGAGTALGERDAVLVWLDLGGNL 405
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: K9THS9_9CYAN (Regulatory P domain of subtilisin-like proprotein convertases n=1 Tax=Oscillatoria acuminata PCC 6304 TaxID=56110 RepID=K9THS9_9CYAN) HSP 1 Score: 134 bits (336), Expect = 1.900e-31 Identity = 103/274 (37.59%), Postives = 141/274 (51.46%), Query Frame = 1
Query: 19 DFAYGSAVSGDGSFYVAGKTSGPFDGAAEIVGWYDMVVAKFDSDGNFLWSWQDGTERDDALRCAVATDDGG-VVVGGYTYGTYDGVASEGPEDFVALKLDSDGNVEWIWQDGSDEDDYMQACTLTADGNVVLAGYTNGEWLGSKPGASAIAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDG-SEFSYSTIRGVAALSDDSLVLVGSTTGDYSGTTENAGETDFVVVKLT 834
D AYG A D +FY+ G T+G A+ G YD +AK+DS+GN LWS Q G+ + D R VA D GG V + G T G+ DG + G D K D DGN+ WI Q G+ D + +GN+ + GYT G G G I K D G+++W Q G ++ S +G+A S G+V + G T G E G D A+ LD +G ++W Q G S YS RG+A ++ + GST G + TT AG +D V KL+
Sbjct: 2604 DIAYGVATDHDDNFYITGYTTGSL--ASPNAGEYDAFIAKYDSNGNQLWSQQLGSLQTDIAR-GVAIDGGGNVYISGRTTGSLDG-NNAGNFDAFFAKYDRDGNLVWIRQLGTSGWDQSPGISTDKNGNIYITGYTTGNLEGVNAGTRDIFVTKYD-PSGNLLWTEQLGTSSLDYS-YGSATDSAGNVYITGHTTGSLEGENSGGYDVFAIKLDSNGNQVWIQQFGTSAIDYS--RGIATDPAGNIYITGSTQGSFGQTT--AGNSDVWVAKLS 2867
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Match: A0A3D1A6H8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A3D1A6H8_9BACT) HSP 1 Score: 125 bits (315), Expect = 1.050e-28 Identity = 96/287 (33.45%), Postives = 135/287 (47.04%), Query Frame = 1
Query: 4 GSSTYDFAYGSAVSGDGSFYVAGKTSGPFDGAAEIVGWYDMVVAKFDSDGNFLWSWQDGTERDDALRCAVATDDGGVVVGGYTYGTYDGVASEGPEDFVALKLDSDGNVEWIWQDGSDEDDYMQACTLTADGNVVLAGYTNGEWLGSKPGASAIAAVKLDITDGSVVWDYQAGVTTYFVSAWGAAGRSDGSVVLVGGTEGVWGDEQIGTTDFVAVALDEDGEELWRWQDGSEFSYSTIRGVAALSDDSLVLVGSTTGDYSGTTENAGETDFVVVKLTAGGVLEWTWQ 864
G+ ++D G+A G+ Y AG+T+ FD A + G D + K+ ++G LWS Q GT DD+ A A G V V G T G DG +++G D K D+ G W Q GS D + + GNV++ G+TNG++ G+ S + + G VW Q G T SA+G A + G++ + G T G + +DF D DG LW Q G+ Y+ VAA S S+ G T GD+ G N G D +VK G L W Q
Sbjct: 1009 GTDSFDTGRGAAADAYGNVYAAGETAHSFDENAWL-GNKDFFLVKYSTEGAKLWSRQFGTTSDDSAYAAAADAAGNVYVVGDTAGVMDG-SNQGESDVFLAKFDASGTQLWARQLGSAGVDAGRGVAVDGSGNVLITGFTNGDFDGNTSLGSTDLFIAKYTSAGVKVWSKQYGTATSD-SAYGIAADAAGNIFVSGDTWGPFAAADPDLSDFFVAKYDGDGASLWIRQLGAAGMYNFSNAVAADSSGSVFFTGQTNGDFQGA--NIGGMDVALVKYDQDGNLVWKKQ 1290 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1010.15.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1010.15.6 >prot_P-littoralis_Contig1010.15.6 ID=prot_P-littoralis_Contig1010.15.6|Name=mRNA_P-littoralis_Contig1010.15.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=288bp AGSSTYDFAYGSAVSGDGSFYVAGKTSGPFDGAAEIVGWYDMVVAKFDSDback to top mRNA from alignment at P-littoralis_Contig1010:69520..78136- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1010.15.6 ID=mRNA_P-littoralis_Contig1010.15.6|Name=mRNA_P-littoralis_Contig1010.15.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=8617bp|location=Sequence derived from alignment at P-littoralis_Contig1010:69520..78136- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1010:69520..78136- >mRNA_P-littoralis_Contig1010.15.6 ID=mRNA_P-littoralis_Contig1010.15.6|Name=mRNA_P-littoralis_Contig1010.15.6|organism=Pylaiella littoralis U1_48|type=CDS|length=864bp|location=Sequence derived from alignment at P-littoralis_Contig1010:69520..78136- (Pylaiella littoralis U1_48)back to top |