Homology
BLAST of mRNA_P-littoralis_Contig101.30.1 vs. uniprot
Match:
D8LR55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR55_ECTSI)
HSP 1 Score: 430 bits (1105), Expect = 1.530e-128
Identity = 405/911 (44.46%), Postives = 468/911 (51.37%), Query Frame = 1
Query: 319 MANMLARETPSADDKDNCQRA------LSTTSALHGGRGKRGAVVISRATSPAGDSDFDYSDDDDGIAILKDDLRTTTERFFERLPRQGQEQQDAGRPNRRASATLSFAHD-------DKTHSGRGGGPCVGLRQQQSWNALQELEKDVGGMMRRHAGAXXXXXGLXXXXXXXXXXXXDGWTGLGGEAVSLRRSHDGGDPFSGCRLGRRSRLRTSSFPPSXXXXXXXXXXXVTQRRPPRDNGASVSDLKARSEEAARMLKALKILLEEEGFHSGDETGDGDTIPPTDQQHRRGALXXXXXXXXXXXXXXXXXXXXXXXCGLWPSCEGEDTAEVSPSSRVDDVGGAGGGIGSGSDGDPSRRMKLLLVAMDNLQQINTDLKSEVKMSRRRTTGGREGRDHRRQHRH-----SQGASSSLSRPIPGGRCSFGQR---RLLQAAS-------------------VAAHPRSSSDLLRNRRSEKGQAEPMSCGVPRHRVQVSRGGDNNIVYYELAITQAKSTWTLERRLDEFVELRRSLVATATDLAAAAAVADRERQAAQAGQKQFGRRSFSSSPCFPADVHFARSDDAGXXXXXERSESGVGRNLAEARREYRRQAEVRVPELPPERNSWFDSSSIWSVLYGRKREEKLTEMQVHLASWLASVLADRELLSTDLVCFLGGDSGGVQAQPVVEDVVPGDDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNFGSDELNDPRGSLFAPEERDIGKRGSGIDSSXXXXXXXXXXSRSTRDGRRAVSPRDRLEKAMYKRLAVEGQARAVGEGEGPRPNDVENFTGVTARMSPGEEVATDEEGEGEDGEEA----------QSLRLKEEFSASVDASRQPRAPSPSPASPTRRVTLDSFFQAPT 2901
MANMLA ETP AD+ N + S VVI+R T+ AGDSDFD SDDDD IA+LKDDLRTTTERFF+RLPRQ QQ AGR RASA + D T SG GG LR QQSWN L ELEK VGG++RR AG GL XXXXXX + DG S PS QRRPPRD SV DLK RS+EAAR L+ALK+L+ +E + + G G+ H G LWP G+ AE S G ++ M+LL AMD+LQQIN +L TGGR+ S AS S + G R S GQR RL QA+ +A PRSSSDLLR RRSE GQAEPMSCGVPRHRVQ+ GGDNN+VY+ELAITQA+STWTLER++ EFVELR SLVATATDLAA A XXXX + S+ R +A+ARR++RR+AE RVP LP SWFDS IWSV+Y R+REEKLTE++VHLASWLA++LADREL+S DLV FLGGDSGG+QA PVVEDV+ G D XXXXXXXXXXXXXXXXXXXXX + GSDELN RGSL AP+E D+ K SG XXXXXXXXXX +VSPRDRLEKAM RL V+ ++ G G V +F+G+ A GE A E E Q L SA ++ RQPRAPSPS SPTRRVTLD+FFQ PT
Sbjct: 1 MANMLAWETPLADENGNSSQPSWSSPRASEAEXXXXXXXXGAGVVIARRTNLAGDSDFDLSDDDDAIALLKDDLRTTTERFFDRLPRQ---QQKAGR---RASAIVPTGGDGVRRNSGSSTVSGVGG-----LRHQQSWNVLTELEKGVGGLIRRPAGTTST--GLRSPEGGXXXXXXX-------XXXXXXFTADGSATLPXXXXXXXXXXSASPNGPSSPRGGRDVLPR--QRRPPRDPKTSVKDLKVRSDEAARTLEALKVLILQERLPA--DGGKGEV------SHGHGGRNGK----------------------LWPVDAGQIAAEDSXXXXXXXXXXXXXXXXXXXXGLGAKHMELLAKAMDDLQQINAELXXXXXXXXXXXTGGRDPHXXXXXXXXXXXXASSAASVSWRLQLHGRRTS-GQRPPKRLSQASGRSXXXXXXXXXXXXAGVGPLARQPRSSSDLLRQRRSEVGQAEPMSCGVPRHRVQLGNGGDNNVVYFELAITQARSTWTLERKMLEFVELRESLVATATDLAAEAXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSSKKSDSRTVADARRDHRRKAEARVPPLPESPKSWFDSG-IWSVMYARRREEKLTELKVHLASWLATILADRELVSPDLVSFLGGDSGGMQAHPVVEDVLSGCDSLTGAEWTDPWSDXXXXXXXXXXXXXXXXXXXXX-----------DLGSDELNSLRGSLCAPDEWDVTKSRSGSXXXXXXXXXXXXXXXXXX----SVSPRDRLEKAMVTRLFVQARSGGAGAARG-----VTSFSGIVASGQGGEVAAYGCEDEXXXXXXXXXXXXXXXXIQDPGLTSTLSAPMETPRQPRAPSPS--SPTRRVTLDAFFQPPT 825
BLAST of mRNA_P-littoralis_Contig101.30.1 vs. uniprot
Match:
A0A6H5KNZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ4_9PHAE)
HSP 1 Score: 405 bits (1042), Expect = 3.480e-119
Identity = 408/947 (43.08%), Postives = 482/947 (50.90%), Query Frame = 1
Query: 319 MANMLARETPSADDKDNCQRALSTTS-------ALHGGRGKRGAVVISRATSPAGDSDFDYSDDDDGIAILKDDLRTTTERFFERLPRQGQEQQDAGRPNRRASATLSFAHDD---------------------------------------KTHSGRGG-GPCVGLRQQQSWNALQELEKDVGGMMRRHAGAXXXXX------GLXXXXXXXXXXXXDGWTGLGGEAVSLRRSHDGGDPFSGCRLGRRSRLRTSSFPPSXXXXXXXXXXXVTQRRPPRDNGASVSDLKARSEEAARMLKALKILLEEEGFHSGDETGDGDTIPPTDQQH--RRGALXXXXXXXXXXXXXXXXXXXXXXXCGLWPSCEGEDTAEVSPSSRVDDVGGAGGGIGSGSDGDPSRRMKLLLVAMDNLQQINTDLKSEVKMSRRRTTGGREG--RDHRRQHRHSQGASSSLSRPIPGGRCSFGQR---RLLQAASVAA-----------------HPRSSSDLLRNRRSEKGQAEPMSCGVPRHRVQVSRGGDNNIVYYELAITQAKSTWTLERRLDEFVELRRSLVATATDLAAAAAVADRERQAAQAGQKQFGRRSFSSSPCFPADVHFARSDDAGXXXXXERSESGVGRNLAEARREYRRQAEVRVPELPPERNSWFDSSSIWSVLYGRKREEKLTEMQVHLASWLASVLADRELLSTDLVCFLGGDSGGVQAQPVVEDVVPGDDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNFGSDELNDPRGSLFAPEERDIGKR--GSGIDSSXXXXXXXXXXSRSTRDGRRAVSPRDRLEKAMYKRLAVEGQARAVGEGEGPRPNDVENFTGVTARMSPGEEVATDEEGEGEDGEEA-------QSLRLKEEFSASVDASRQPRAPSPSPASPTRRVTLDSFFQAPT 2901
MANMLA ETP AD+ N + LS +S A VVI+R T+ AGDSDFD SDDDD IA+LKDDLRT F +RLP +RRASA ++ + +SG G GLR QQSWN L ELEK VGG++RR AG XXXXXXXXXXXX +T GG + S D G S+ P QRRPPRD SV D KARS+EAAR L+ALK+L+ +E + D G+ QH R G L WP G+ +A S ++ +KLL AMD+LQQINT+L +E++ SRRRTTGGR+ R S R P R +FGQR RL QA+ +A RSSSDLLR+RRSE GQAEPMSCGVPRHRVQ+ GGDNN+VY+ELAITQA+STWTLER++ EFVELR SLVATATDLAA A XXXXX GR L +ARR++RR+AE RVP LP SWFDS IWSV+Y R+REEKLTE++VHLASWLA++LADREL+S DLV FLGGDSGG++A PVVEDV+ D +S XXXXXXXXXXXXXXXXXXXXXXXX GSDELN RGSL AP+E D+ K GSG D XXXXXXXXX S+ VS RDRLEKAM RL+V+ ++ G G + +F G+ A GE A E E Q L SA ++ RQPRA SPS SPTRRVTLD+FF+ PT
Sbjct: 1 MANMLAWETPLADESGN-KSLLSWSSPGPSEAEAAEPAGASSAGVVIARMTNLAGDSDFDLSDDDDAIALLKDDLRTXXXXFXDRLPX------XXXXXSRRASAIVATGASPGGASASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRNSGSSTVGGVGGLRHQQSWNVLTELEKGVGGLIRRPAGTTSVGLRSPEGGXXXXXXXXXXXXXXXXFTADGGATLP---SPDXXXXXVG-----------SASPNGPSSPRRGRYVLPRQRRPPRDPKTSVKDFKARSDEAARTLEALKVLILQERLPADDGKGE------VSNQHGGRDGKL--------------------------WPVDAGQGSAADSXXXXXXXXXXXXXXXXXXXXXLAAKHIKLLAKAMDDLQQINTELNAELRASRRRTTGGRDPHHRXXXXXXXXXXXXXSISQRLQPHDRRAFGQRSPKRLSQASGRSAAXXXXXXXXXAVGPLVRQARSSSDLLRHRRSEVGQAEPMSCGVPRHRVQLGNGGDNNVVYFELAITQARSTWTLERKMSEFVELRESLVATATDLAAEAXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDGRTLEDARRDHRRKAEARVPPLPVSPKSWFDSG-IWSVMYARRREEKLTELKVHLASWLATILADRELVSPDLVSFLGGDSGGMRAHPVVEDVLS-DCDSLTGAERTDPWSDSGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSDELNSLRGSLCAPDEWDVTKSRSGSGGDLGPXXXXXXXXXXXSS------VSSRDRLEKAMVTRLSVQARSGEAGAARG-----ITSFFGIVASGQGGEVAAYGCEDEXXXXXXXXXXXXXIQDPGLTSTISAPMETPRQPRASSPS--SPTRRVTLDAFFRPPT 871
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig101.30.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.53e-128 / Id = 44.46 Expect = 3.48e-119 / Id = 43.08 Sequence D8LR55_ECTSI A0A6H5KNZ4_9PHAE
Match Name E-value Identity Description
D8LR55_ECTSI 1.530e-128 44.46 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5KNZ4_9PHAE 3.480e-119 43.08 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 4568 Hectar predicted targeting category other localisation Exons 2 Ec32 ortholog description Phox homologous domain Ec32 ortholog Ec-06_004290.1 Cds size 2763
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789349.7677898-UTR-P-littoralis_Contig101:99687..101351 1680789349.7677898-UTR-P-littoralis_Contig101:99687..101351 Pylaiella littoralis U1_48 UTR P-littoralis_Contig101 99688..101351 - 1680789349.7981513-UTR-P-littoralis_Contig101:112117..112258 1680789349.7981513-UTR-P-littoralis_Contig101:112117..112258 Pylaiella littoralis U1_48 UTR P-littoralis_Contig101 112118..112258 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789349.7773547-CDS-P-littoralis_Contig101:101351..103958 1680789349.7773547-CDS-P-littoralis_Contig101:101351..103958 Pylaiella littoralis U1_48 CDS P-littoralis_Contig101 101352..103958 - 1680789349.787745-CDS-P-littoralis_Contig101:111961..112117 1680789349.787745-CDS-P-littoralis_Contig101:111961..112117 Pylaiella littoralis U1_48 CDS P-littoralis_Contig101 111962..112117 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig101.30.1
>prot_P-littoralis_Contig101.30.1 ID=prot_P-littoralis_Contig101.30.1|Name=mRNA_P-littoralis_Contig101.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=921bp
MAGETMFDGGSLIFPPPPTFRAPTRDSVLAAATRGKRSSTIDEDDLSFMD back to top mRNA from alignment at P-littoralis_Contig101:99688..112258-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig101.30.1 ID=mRNA_P-littoralis_Contig101.30.1|Name=mRNA_P-littoralis_Contig101.30.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12571bp|location=Sequence derived from alignment at P-littoralis_Contig101:99688..112258- (Pylaiella littoralis U1_48)TTATACTTGGTCACCCCAAAAAAATTAAAACAAAAAATATTGTTTGCGTT
TGGTGAGAGTGTAATCCCGACAACCCGACAAACGGCGGAAACAAACCGAT
ACATCAGTAGCAGTCACACCGCCGCAGGAGAGCGTGTGCCC ATGGCTGGA
GAGACGATGTTCGATGGAGGGTCATTGATTTTTCCCCCGCCGCCCACTTT
CAGGGCGCCCACGAGGGACAGTGTTCTCGCAGCAGCAACGAGGGGGAAGC
GTTCTTCCACGATCGACGAAGACGACTTGTCTTTTATGGATAAAGAG GTA
TGATGTAATATTATAGGTTTAGGTTTTCAAGAGGCTCATGAACAAAGCAC
ACTTTGAGGACTGTAATTTGATACTCTGTGTGTACAGCAGGGCGATAGTT
GAACAAGAGGCGGCAGCAGAAGTTTGGCAGACCTGAGACCGCCTTTGTAC
TCGTAAGGGTCCCTCCCACCCACGAGAGTGTGTGTTAAGGAAAAAATGCC
CACTGGTCATGTGGGCCATGCGTGCCTTCTGTAGATGGATGGATTGATTG
GCTTGGTGTCTTCAATCTGAGCCCTTTTCCTATCTCAGCCGTTCGGGCCA
AGACATCACTGATCACTAATTAATTTTCTTCACACCGCCGTCACCGATGC
AAAATTGAATTTGTCTGGTACAGGTATGTATGATGTGATACAACATCAGT
ACTCTAGCTGCCGCTGCTGTGTGATGTGATCTCGTGTTGCCAGAGACCTC
ACGCTCTAGCCCAATCCGCACGAAAAAGTAGCTGGCTTTCAGCAGTTTTT
AGTATTTAGATACTACAACCGGGACAACGATACCTGCTGTACTTCTGTAC
GACTCCGGCGGAGTAAGATTGGACCCTGAATCCCGGAACCCACGATCCGA
CTGCTTGATTTTGCTCTTCTGTACACGAAGTAACATGATGCAAAGCAGCA
CTGAAGCACACCCCTTTCATATCGATGTTACGGTAACACACAGAGCAGCG
TTTTGCAACGACACATCATATATGATGCGGTGTACAGCAGTACGGAGCCT
GAGAGCACAAAGTATTTTTACTTACGCAGCATGAGACTTCAAGGTCATTT
ACATCACAACAACAGCTTCGTTTGCCGCGCTCGTTCGTCTTGCCTGCAAA
TCGAGCTTTGAAAATGCATTACCGGTACATCAGCTACTTCTACTACTGCT
GTGTAAGCACGAGAGATACGAAGTACCTCGTACCAAAGACCAAATATTCG
CACAACAGCAGCAGTAGCACCGGTTGTCTGAAGATTTGTCAGCCATCATA
TGACATCATAGGGCCTGCTGTGTTGACAAAAAAAAGGACTTGGAGCGTGG
AACGTGGAGCTCAGAATACTTCCTGTCGATAGAAAATAAATTTCCTGTAA
TAAAAATAAATAAGCGTGTAGGCCGCCGGTGTTCTCCGTGTGTTTAGCCA
TGTTTCAGACCAAATATTCGCACAACAGCAGCAGTAGCACCGGTTGTCTG
AAGATTTGTCAGCCATCATATGACATCATAGGGCCTGCTGTGTTGACAAA
AAAAAGGACTTGGAGCGTGGAACGTGGAGCTCAGAATACTTCCTGTCGAT
AGAAAATAAATTTCCTGTAATAAAAATAAATAAGCGTGTAGGCCGCCGGT
GTTCTCCGTGTGTTTAGCCATGTTTCTCGTTCCCTCCGCGCAAATAAACT
TCATGTAGGAACATGAAAAGAACGCCGTGCCTTGATGGTCCTTAAAATAG
TTTCGAGTACTGTATGCAGTATGCAGCCCATGTGCCCCACCATGCGGAAC
GGGCTGCCGGTGGGCACGAAGCTTCTGGCGCGAAAAAATGCAAAACTGCT
GCAAATAAAATTGACCACCATTCCTTCGGTACACGTATCATGTACAGTAT
TCGCATTGATCCGGTCGCCCCGGGGTGTAAAGAGTGACCTCGACGCTGGA
CGAACACACCCAGAACTTGAATTCGAATGCCGATGACGTCATACATACGT
ATGATTTATACTCCCTAGTATATAATACGATGTTGGATTTCTCTCACATT
AGTCAATATTCAAAAGCTGTAATGCGAAAACGACGATGTCGCGATCCGAC
TTCTAGTAACAGCCGACGAGGGAAAAGGGACGGTGGAACCCTTCTCGCGA
TAAAAAGCTGAAAAGCAACCAAGACAGCACCCCAGAAGGTGTGTGTGCGT
GTGTGTGTGTGTGTGTTATCATCCCTTTCATTGGACGCCACTCTACACCT
TTCGGATAGGTAGACGCTCCAACCGGGGTCACACAGGGGGAAGTCAACAC
AGGAGTTTTTTTTTTTTGTGGTGGAGGAAAAAAATTAACTCATGTGTGAC
AACAATCCTCTTGTGTGAACCCGGCTGGTGCACCCACTTCCCACTTCATA
CCGAAAGATGTGTAGACTGGTGCCCAGGATAAAAGTGACGAAAACACACA
CACACACACACACGCACGCACCGTTCACATCATTCTTTTTGTTAATCTGC
TTTTTTCAAGCGAGCCCGGATTACTGCTGTGGACGGCCGAGAGATATGAC
ATCCACCAGAATGATGTGATGTGCTGTGCTGTGTGTGCGAGAAATGGATG
TACCACGTGCTGTGTGTTGTGTTGAAAGGAAGCATATTAAAAACCCAAGT
TTCGACGGCCGAGTGGGCTGTTCGTCTGAAAGCAGCTCCCATGCTCTCAT
TTTGTGAAGGCGTGCCTTTATTAGATAGACTCAATCATCGTCGGGATATT
CGGGCCTCATTCGGGAATAATTTGAAATTATTTCTGGTAAATTTCGGCGA
CCAGAACTAATGGGGGGGTAATCTTCTGGAAATCAGAAATAAAAAATGCA
GGCCGTCGCGAATAATTTGGAGCCCCAGGATAATTGAGCAGTGAAGTTGG
GTGCTGAGGAGCTCCGAAACAATACATACATAGCGGATTGTGCAATCACT
GTTGTTGGTAGATCGCTGTGTCACAGGGAGAGAGTCCCGAAAGCCATTAC
ACGGGGATTTGGCCGAGGTGGACTGCTGTGTCACAGTAGTGAAAGTGTCC
CGAAAGGCAGTAAACGGGGGTTCGGCCGAGGTGGATTGCTGTGTCACAGT
GAAAGTGTCCCGAAAGGTAGTAAACGGGGATTCGACCGAGGAGGATGGCT
GTATCACAGGGTGTGGGTCCCGAAAGGTACTGAACGGGGATTCGGCCGAG
GTGGATTGCTGTGTCACAGTAAAAGGTTTCCGAAAGGCACTAAACGGGGT
TTCGGCCGAGGTGGATTGCTGTCACGGTGGAAGTGTCCCGAAAGGCACTA
AACGGGGATTCGGCCGAGGTGGATCGGTGCCTCACAGCAGTCCAAGGGTC
CCGATAAGGAACTAAACGGGGACTCGACCGAGGCGGATTGCCGTGTGACA
GCAGTGGGTAGGTCCGGAATCTGTACTTAACCGGGTGTTGGTGGAAGGAT
TAATTACAAGTTGGGTTGTTCCTGACAGGAAAAAGAACCCGCCCCGCCCC
GCCCCATGCCAACTCAACCCAACCCAACCAAACCCAAAACCGAACTAAAT
GCCGCCGACGGCGTGAGATGGGTAAGATGGTTCATCACGAAGTTTGTATT
CCCCGAGTGCGATTGGTCCATCCTGCGGGGGGCGGATACCTCTTCTGGCT
ATCCCAAAGTGTGGCGCGCGCCACCCCTCTCCCTCTGATCAAGTAGAGGT
CATGTAAGAGTGAAGAGTAGCAGCAGTAGTAGTAGTCGAAGACGAGGGGC
AGGAATTGAAAGAGCAGAACTCGTAGAGGGAATGGAATTTGAATTCCGAG
GGGAGCTGCTGTCGCAGACCGGACGTGATACAGCAGTAGTAGAGGAGGGG
GATGGAGGGCAGGAGAGAGAAGGACGAGATAGTGGGAAGAGGGCGAAGGA
CCAGCAGGGGTGAGCGTGGGAGATGCTTTGGGATGCTGAGTTGAGTAACA
TGCAATGGAGACAGCAGGACAAGAGAGATGCCGTACTCGTATGCTGTCAT
GAGTCCTGCTGCTGTGTTTGAGAAGACGAGAAAGATGTTAGACACAGCAG
TGCGGACAGAGAGGCAAGTGACATGATGGTATGGTCGGTGATAAAGAAGC
AGACGAGGAAGCAGCGACAGCGGAAATGATAAAGGCGATTGACAAATCTT
GGATGGTAGCCTCGGCAGGAGTGAAGACCGTGAGCAGCAGGCAGATGAGA
AGAGGGCGTGGTGAAGGAGAGAGCAGCGGAAATGAAAGCCCGTTGAAAAT
ATGGAGTTCCGCACCATCGCATGTGACCAGGGGGGATGGACATGTAGGGG
CCCAGGGCACCAAGAAGTGAGATATGTTGGCCAAGAGACGTTGGCCCACC
CCCCCCTGATTGGCAATATGCAGCCGAAGATGCAAGAAGGCGTTGGTACG
GCTGCACACTGCTGTAGAAAAGCACAAACAGAGAGAGGTGGCGAAGGAGA
AGGAGAGGAGAGGAACCGTAGTCGACCCTACCCAACTTTACCCTACCCAC
TACCGAACCCAAGGAAGTAGCAAGGTGGATTGCTGTGTCACATTGTGTGT
CCCGAAAGGCAATAAACGGGATTCGGCCGAGGTGGATTGCTGTGTCACAG
GGAGGTGGTCACGAAAGGCAGTAAACGCAGTAAACGAGGATTCGACCGAG
GTGGATTGCTGTGTCACAGGGAAATTGTCCCGAAAGGCACTCAAAGGGGA
TTCCGCAGAGGTGGATTGCTGTGTCACAGGGAAACCCGAAAGGCACCAAA
TAAATGGGGATACGTCCGAGGTGGATTGCTGTGTCACAGTGAAGGTGTCC
CGAAAGGCAGTAAACGGGGATTCGGCAGAGGTGGATTGCTGTGTCACAGG
GAGAGGGTCCCGAAAGGTACTAAACGGGGATTCCGCCGAGGTGGATTGCT
GTGTCACAGGGAGAGGGTCCCGAAATGTACTAAACGGGGATTCCGCCGAG
GTGGATTGCTGTGTGACAGGGAGAGGGTCCCGAAAGGTACTAAACGGGGA
TTCCGCCCGTGGTGGATTGCTGTGTCCCAGGGAGATGTTCCCGAAAGGCA
CTAAACGGGGATTCCGCCGAGGTGGATTGCTGAGTCACAGAGCCCCCACA
GAGACAGTCACAAATATTGGTCATGATGTCTAATAATTCGGGAAAGCTTT
TGGAAGGCTTTGACATAACACACAGTCCCGCCTGTCGATGTCGGGAGAAT
AGAAAGATGTCTGTCTGCTGCTTGTGTGTCCATGTGTGTGTGCCTGTCTA
TGTCAACCCCTTCCTGTTGTTTGGGTGGGTGTGTTTGTTCGGGAGACCCA
CCAGCAGCACAGCAGCAGCAGCAGTACTGTGGGTGATAATAACTCTATCT
GCTGTATCGCTAGGAGACAGGAAGGTCTCTTGGCAGTGTAGCAGCAGCAA
GCAATCGCCGTCTGGCAGCGCCAGGTTCAGATTATGGCGTGCTGTACAGA
AGTACACGGGACAGCAGTGTAATGTAGGTTGTACCTGTGTTGTGCCTCTC
TTCATTTGTTTCCCAACCCAAACTTTTTGCCGGTGGTAGTGTGGGAGAGA
GTCGGGCGTTGTTATTATTTAGCTAGCCACCAGAGTCTTGCCCCCGTGAC
GATAAATCAGGCACACATCACACGTCACACGTGTACGCATCATCTCCGTA
ACTGTAATCGATAGAAGAGCAGTACGAAGCATGGGAAGGAAAAATGATGC
ACGGTGCAGCTCGCACGATGGGTCGACTGGTTGCGAAGAAGGGGTAGACA
TCTATGACGTGGCGGGAGTTTCTGCTGAAATGTGATCTGCGTCCCCTTGC
ATCATGATAGATATCTGGCCGATATCTGGGTAAAAATTTTTTATGTCGTG
ACAAAGGACTGGCTCGTGAAAACCACCAGGTATTTTCAAAGCCCCTTTTT
CGGCGTACCATCCCATGATTTCCAGCACATTCTGGACTGAAAATATCCCG
ACCATTAGAATTGGTCTCAGATGAAAAATGGAAATCAGGGAGTGTCTCGG
TAACGACTTTTGATGTCGGGACCATCTATCGCGGTATGCAAACGCGGTAA
CTCACGGTATTTTTTTTGCGGTAATCGACTGTCTCGGTAACTGCTACCGC
GGTACTCAACGACCGCGGTAACTCGCAGTAATTTTTGCACCATAGTTGAT
CACCACGCACGGTAATTTCTTCCAGCGCGGTGATATCCAGTTTTTTTTTG
TTGCACCAGCGGATGGTGTGGCGAAGCAAGTTCGTTCATAATTCGTAGTT
CTAGCAATAACATGACATTCCCTCCTACCACAGGACTGTCATGCTCACCA
CCACGCAGCAGCGGCTCGCAGCACCAGCACCACTCTCCGCGGGAAAGATT
GGTAACAACGAACGGGTGATGCTCTTCCACCAACGCGTCTTAGTTGACAC
CACCAGCATTGGCGCCCCTCCTTCCACGACTGCCCAACACAAAAAAATAA
TAAAAAAATAACCAGAAAAGAGAAAAAGAAAACAGGGACACAAGAACAAA
AAAAGTACTTCGTAGTAATGAGGTCGGGTCCGAACCCACCGACTGGACTC
AACGTTGTCACATTCACCTGATGCTTCACTCAGGAATGAAGCTGATGATT
CGCGGATCACAAGATGTGTTTCTGCGCGGTAATTGGGACTTTCGAAATCT
TGCGGTAATTGTTACCGCGGTATCATACTGATGAATCGCGGGATTTGCGA
TATTTTCACGGTAGTTTGTTCCGCGGGAACGGGACAATTTTTTGTAGCGG
TAAGTGAATGTATGGGGGTGAGACGATTTTTTTGTTGCGGTAATGGAATA
TTTTAAAAAGCGCGGTAACGCAAAAAGTCCCATTGCCGCGGTAAATACCA
CGGTAACATTACCGCGAGAGAATTACCGAGACACCCTTGAAAAGTTTGAT
TATATGGAACGTGGGGCCTGTAACGTTTTAAGTCCTTGTTCCCTGTTCCA
TGCGTCTTGTCTTGGATCAAAGAAACTTCGCCGAAATGCGGAACGTGGAA
CCTCTGATTTCAGGCGAAGAGCCTGCTCGCTTCTGCCGCTCCTAAACTGC
GTGCGAACTGCACTACTTCAAGGTGTCATTTGCTTTCGTACAAGTACACC
TTCGAAGTACTTTTTGCTTCGCACGACGTGTCATTAGACGTCGAAGTACT
TCAGTATTATTTCCGCACAAAACCCCGGTCTCTCGAACCCGTGGACACCA
AAATAGGCTCGCGTACCATCACTACACATACCTCACAACGCAAGAGAGAG
GCACTTACTCATGAGAGCAGCTTCTTCTGAGACTGACTCTCTCAACAAAA
CACCTGGAACACAACAAATGCTCCACGAGACACGTCAAGGGACTCGACAG
GGAAAGCTTCCCCCGAGCTGGTCGGAGGTGGAAAAAAGAACCCTTCGGAG
TAAATGAGATACGCCGAAAGCAAAAAACAAAACACCGGAGACACGAAACA
TGAAGGGAAAATATTCGGATACCACCCAAGATCGTGACTGCATCCCCCTC
AGGTACCAACGGTTGGGCCTCTTTTGAAACTTCAGGGGGCTTGCAACGAG
ACTAAGGGACGTATAGTGGCAAAACAAGAAGTTCCTCACATGGCGCTCGT
CGGTCGCGTCCGCATTCGTGGTGGTCCAGTTGGTAATGTTCTTCTTGGCC
CCCTCCTTCACGAGATGATACCTTCAACGTCGAGCTCCGTGGCTCCTTTG
GGCTCTGCACACTTCAGATGAAACGCATGCTCATGTACCAGTGTTAAAAA
CATTTTCAAGCCAAGTACGGCTGCACACTCATCCACATATAAGTACCTCG
AGTGCAAGGTACCGCACAATTCTCTGACAGAGCATGCCAACTAGAATAGA
CTTGAAAACGTTGAAGCTTTGTCAAGACCCCCCCCACAAAGCTGAGAATG
GCCAAGCATCACCTTCGACCTTTCCGGCATTTCCGAATAAGCGTCCAACT
CTACCTCGTGTTAATGGATTGGTTTGTGTACAGCTACTGCAACGTGAAGG
AGGGTGAGCGTTGTGGGTGCCCTGTGTACTGTGTGCGTCGTGCTGATACT
GTTTTTTTCTGGCTTCGTCTGCTGCTCATCTCTAATTGGCGTTCTTCGGT
ATCTCTCTCTTTGGTACTTCTGTCTCTATGCCTGTCTCCTTCTTTCCCGT
TCATGTCGCGTATAAAAGCGCCCGTCTCGTCGCTGAAATAATGAACGAAG
TATATCTTTTGCAATTTCGTTTTTCCTCGGTTGTCGTCGTGTCTCTGTCC
GTTCCCTTGCCATTGCTGCCTTTCCTTCCACCTTGCCCAAACGTGTCTAG
ATCAAGCGTCTCCACCGCGATATGGCCAACATGCTCGCCAGGGAGACCCC
CTCGGCTGACGACAAGGACAACTGCCAGCGTGCGCTGTCCACTACTTCTG
CCCTTCACGGCGGGAGAGGAAAAAGAGGGGCGGTGGTCATCTCGCGTGCG
ACCAGCCCTGCTGGCGACAGCGACTTCGACTACTCAGACGACGACGATGG
CATCGCGATTCTCAAAGATGATCTCCGAACCACGACGGAAAGGTTCTTCG
AGCGCCTCCCCCGGCAGGGGCAGGAGCAGCAGGACGCAGGTCGGCCGAAC
CGCCGGGCCTCGGCGACCTTGTCGTTTGCCCACGACGACAAAACACACAG
CGGCAGAGGCGGCGGCCCTTGCGTCGGGCTCCGCCAGCAGCAGTCGTGGA
ACGCGCTGCAAGAGCTCGAGAAGGACGTGGGGGGCATGATGCGGCGGCAC
GCAGGAGCTGCGGCGGCCTCGATGGGCCTCCATCCCCCTGACGGCGGTGG
CAGCAGCGGCGGCGGGGATGGATGGACTGGTTTAGGTGGTGAGGCCGTGT
CACTTCGACGATCGCATGATGGCGGAGACCCTTTCTCTGGTTGTAGGTTG
GGGCGACGAAGCCGCCTAAGAACCTCGTCATTTCCTCCTTCCACCCCTCC
GCCTGGAGGTGGAGGTGGGCGGGAGGTTACACAGCGGCGACCGCCCCGCG
ACAACGGAGCGTCGGTGAGCGACCTGAAGGCTCGTTCCGAGGAAGCGGCT
AGGATGCTGAAAGCTCTGAAAATCTTGCTCGAGGAAGAGGGGTTTCACAG
CGGCGACGAAACCGGCGATGGCGACACTATTCCTCCTACCGATCAACAGC
ATCGGCGGGGTGCGCTTCACGACGGAGATGAAAATGGCGGTTGTGACACT
CTCACTCCTGCCCATCAACAGCGTCGGAAGGGAGCCTGCGGGCTCTGGCC
CTCATGCGAGGGAGAAGACACGGCGGAAGTGTCTCCTTCTTCGCGGGTGG
ATGATGTGGGCGGTGCCGGTGGCGGTATCGGCAGTGGCAGCGACGGTGAC
CCATCAAGGCGCATGAAGCTGCTGTTGGTGGCCATGGATAATCTCCAGCA
GATAAACACCGACCTCAAGAGCGAGGTTAAGATGTCGAGGAGGAGAACCA
CCGGCGGGCGCGAAGGACGCGACCATCGCCGCCAACATCGTCATAGTCAA
GGTGCCAGCTCTTCGTTATCACGCCCGATTCCCGGCGGCCGATGTTCTTT
CGGCCAGCGGCGGTTACTGCAGGCGGCGTCGGTGGCGGCCCATCCGCGGT
CCTCGTCGGACCTGCTCAGAAACCGGCGGTCGGAGAAGGGCCAGGCGGAG
CCGATGTCGTGTGGCGTCCCCAGGCACCGCGTGCAGGTGAGCAGGGGGGG
TGACAACAACATCGTGTACTACGAGCTGGCCATCACGCAGGCAAAGTCCA
CGTGGACACTCGAGCGTCGCCTGGACGAATTTGTCGAGCTGCGCCGCTCG
CTCGTGGCCACGGCCACGGACCTGGCAGCGGCAGCTGCAGTTGCGGACCG
GGAGCGGCAGGCGGCACAAGCAGGGCAGAAGCAGTTCGGCCGGCGTTCCT
TTTCTTCGTCTCCTTGTTTTCCCGCCGACGTGCACTTTGCTCGTAGTGAT
GATGCTGGTGGTGGTGGTGGTGGCGAAAGAAGCGAGTCTGGCGTCGGCAG
AAACCTCGCAGAAGCGAGGCGCGAGTACCGGCGCCAAGCCGAGGTGAGAG
TGCCGGAGCTCCCGCCGGAGCGAAACAGCTGGTTTGACTCGTCGAGCATC
TGGTCCGTCCTGTACGGCCGGAAGCGGGAGGAGAAGCTGACGGAGATGCA
GGTGCACTTGGCCTCTTGGCTCGCGAGCGTTTTGGCGGACCGCGAGCTCT
TGTCCACGGACCTCGTGTGCTTCCTGGGCGGGGATAGCGGAGGCGTGCAA
GCCCAGCCCGTTGTAGAGGATGTCGTGCCCGGCGACGACGAAAGCGACGG
CGACGATGACGACCTTCTTCGTTGTATGAGCACTGGTTCTTCGTGGTCGA
GCTCGAGCTGCAGCGTTGACGATGATGTCGCTGCCGGCGACGGCGATGAT
GACAATGATGACGATACCGACGATAACTTTGGAAGCGACGAACTCAACGA
CCCGCGCGGATCTCTGTTCGCTCCGGAGGAGCGGGACATCGGTAAGCGCG
GAAGCGGGATTGATTCCAGCAGTGGTGGTGGTGGTGGTGGCGGCGGCTCC
AGCAGAAGCACTAGAGACGGCCGCCGCGCTGTCAGCCCACGGGATCGGCT
TGAAAAGGCCATGTACAAGCGGCTTGCTGTTGAAGGGCAGGCTCGAGCCG
TGGGCGAGGGTGAGGGTCCGAGGCCTAATGATGTTGAGAATTTTACCGGG
GTCACCGCGAGGATGTCGCCAGGAGAAGAGGTGGCAACGGACGAGGAGGG
AGAGGGAGAGGACGGAGAGGAGGCACAGAGTCTCCGTTTGAAAGAGGAGT
TTTCGGCGTCTGTTGACGCTTCCAGGCAACCGCGGGCGCCATCGCCGTCG
CCTGCGTCGCCCACCCGTCGCGTAACGCTGGACTCTTTTTTCCAAGCACC
GACGTAA AAAGCGTCACACTTGTATGATACGAAGTATGTGCTTTCTTTCA
CGTAGTCAGTGAAGCAAATCGCGAGACCTCATTTTCGCTTACGTGCCGCG
GTCGTCATGTTGGCTGCGTGGGGCGCCGAGTTATTGGTCTTTTCGTCTGT
TGTACTGGTATATTTATCCATTATTTGTGAAATCTACCCTGCTTTCGTGT
TTTCATTTTTTTCGACGATGGCGGACATCGCCCGAGCTGTATTTTGTGCG
CGACGTAACGTTGTATTTTGGTGGCGTGTGTGTGGCGTCCGGTCCCTGCA
CTAAAACGATTTTGATATGATTTGGTATTTAAGTTGGGCGGGTGCGCATT
CAACGAAGTACGTGCCCGCCCAAGGCTGCATGTTTCGTCGTGGGCGTAGT
CTAAAATGTGGTGCTTGTTCTTGTTCCCGGTAGATTCCCGTAATTGTATC
GTAAAGGATTTTTTTGGGGAATTGCTTCTTGTGCGGTGAACACAAGCACA
CAAGTATGACATGTGTTCTTGTTTGTCTGATTTGCGAGGGCCGGCCGTGG
CAAGGTTTCGTGCTTGCCGTGCTAAGGATCTTTGTCCGTCATCTACTGAC
GACAGGTCATAGGCTAAATGTTCATGCACGGTTCGTTATTTCCATTAGCT
GCGGAGATATCAGAAACCAACAAGCTAGATCCTCCGGCCTCGATTTTTTG
TACATCCTTTTTTCTCCCTGCTTGCGTTTACGCGTCGACAAAAAATGTAA
TCCATTCATTCTGGTTCACGAAGCTTGGGCACATTTGCATATGCGCGTAG
TACTCGAACGTATTTCTGTGTATGTATGTATGCATTCACGATATACATCG
TCCCGTTGCGGTGTGGCAATTGGTTATTGGTTTGCGTTAATAGAGGATTT
TGTTACGGTAGTTTTTGCATCGTCGTGATGATGTGAAGTAATTGAGTGTG
AATTTTTGGTTGGGGGCACCGTATTGAAACAGAGTTCCCTCTCCATCTCC
TACTGTATGGCTGCAGAGCTGCGAGACCTGGTTTCACCCACAAGTACACC
TGAAAGTACCCACTCCTTTTACAATACACTGTGTGTGCTGGTTTTTGCCA
TGAGCGCTTTGGTTTCTGGTTGTTGTTGGCACTCGAAATACGTGTTTTTA
TACCACGGTATTGTAGCTCAGCAGTCGGAGTAGACTTTTAATAAAAGCAT
CGATAATCCTTTTTCGTGGATGAACATTGTGGGAATCCCGGCTAATGAGA
GTGTGGAAGGGGGAAGAAAGAGGTCTAAAGCGCAGCATAAAGTGCTTTTG
TGAGACATGCGAAATATTTAGAGTGCGGTCGGAAGTGTGTAACCCGACGG
GCCCCCTCTGTCGACATTCACTTTGGGAAAACATGAGACCAGACGCATTG
ATTGGTACGGTCGTCGTACAGAGAAACTTTCGAACAGATAAGACACGTAT
TCGTAGTGTGTTCTTATTTTCGAAATCATCAAGATCGAAATGTAACATGA
ATTACCTCTTTTCATTATTGTTGATGTGCCCATCGTGTGCATCATAAAAA
GAGGGCGTTCTCGTTCATGTGCAAAGAAAGGGAGGGGACCGGGGATGTTT
ACATTTCAGGGATGGTCCTACTGAGACACTCAATGCCCGCAGTTTCCCTG
TTGGCCAACACCGATAACTAG back to top Coding sequence (CDS) from alignment at P-littoralis_Contig101:99688..112258-
>mRNA_P-littoralis_Contig101.30.1 ID=mRNA_P-littoralis_Contig101.30.1|Name=mRNA_P-littoralis_Contig101.30.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2763bp|location=Sequence derived from alignment at P-littoralis_Contig101:99688..112258- (Pylaiella littoralis U1_48) back to top