Homology
BLAST of mRNA_P-littoralis_Contig101.116.2 vs. uniprot
Match:
A0A6H5KLC2_9PHAE (FHA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC2_9PHAE)
HSP 1 Score: 199 bits (505), Expect = 1.760e-53
Identity = 131/285 (45.96%), Postives = 148/285 (51.93%), Query Frame = 2
Query: 437 SPIQRVDTPCPAALRREQHLQADSTTQSLSYVLLPDGSELGTRRRVIPLDAGQTTVVGRSKSSWIRDHHVSRRHVEITVPEHRHGVSTEECCRIKYIGRNCRVVLVGGILLKAEQEVPAVPGTRVILNFNNKGLPRYSYTLVPANILPSMVTSITTGRRPSGMGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGGRFRKESQDKLQKERDEIFRKFADLKFV 1291
SPI+R TPCPAALR + Q S + +LLPD +E T RR IPL+ G TTVVGR K S IRDHHVSRRHVEIT PE + CRIKYIGRNCRVVL+GGILLK+ QEVPA PGTRV+LN+NNKGLPRYSYTL+PAN LP+ T+ T GMGAA GGRFRKE+Q+KLQKERDEIF KFADLKF+
Sbjct: 49 SPIRRAGTPCPAALRWRRQQQDGSIGR---LILLPDRAE--TSRRFIPLEPGTTTVVGRCKKSGIRDHHVSRRHVEITAPEEGDEGFAQGHCRIKYIGRNCRVVLIGGILLKSGQEVPAAPGTRVVLNYNNKGLPRYSYTLLPANNLPA--TTPRTAHCSVGMGAAGAGDGRPWRGGPVSSSHRLGDSDMEMGSGRKQPFHGDAHLHAYNRPSRYSTIASKQQRPRP-----------------------------GGRFRKEAQEKLQKERDEIFSKFADLKFL 297
BLAST of mRNA_P-littoralis_Contig101.116.2 vs. uniprot
Match:
D8LR39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR39_ECTSI)
HSP 1 Score: 53.1 bits (126), Expect = 5.580e-5
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 2
Query: 1205 GGRFRKESQDKLQKERDEIFRKFADLKFV 1291
GGRFRKE+Q+KLQKERDEIF KFADLKF+
Sbjct: 67 GGRFRKEAQEKLQKERDEIFSKFADLKFL 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig101.116.2 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.76e-53 / Id = 45.96 Expect = 5.58e-5 / Id = 86.21 Sequence A0A6H5KLC2_9PHAE D8LR39_ECTSI
Match Name E-value Identity Description
A0A6H5KLC2_9PHAE 1.760e-53 45.96 FHA_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LR39_ECTSI 5.580e-5 86.21 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1
Start 1
Model size 3074
Hectar predicted targeting category other localisation
Exons 5
Ec32 ortholog description SMAD/FHA domain
Ec32 ortholog Ec-06_004470.1
Cds size 1092
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789352.4809718-UTR-P-littoralis_Contig101:453370..455150 1680789352.4809718-UTR-P-littoralis_Contig101:453370..455150 Pylaiella littoralis U1_48 UTR P-littoralis_Contig101 453371..455150 -
1680789352.5468097-UTR-P-littoralis_Contig101:462986..463188 1680789352.5468097-UTR-P-littoralis_Contig101:462986..463188 Pylaiella littoralis U1_48 UTR P-littoralis_Contig101 462987..463188 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789352.4955866-CDS-P-littoralis_Contig101:455150..455207 1680789352.4955866-CDS-P-littoralis_Contig101:455150..455207 Pylaiella littoralis U1_48 CDS P-littoralis_Contig101 455151..455207 -
1680789352.5097208-CDS-P-littoralis_Contig101:455606..456011 1680789352.5097208-CDS-P-littoralis_Contig101:455606..456011 Pylaiella littoralis U1_48 CDS P-littoralis_Contig101 455607..456011 -
1680789352.519343-CDS-P-littoralis_Contig101:456436..456564 1680789352.519343-CDS-P-littoralis_Contig101:456436..456564 Pylaiella littoralis U1_48 CDS P-littoralis_Contig101 456437..456564 -
1680789352.5271027-CDS-P-littoralis_Contig101:456887..456987 1680789352.5271027-CDS-P-littoralis_Contig101:456887..456987 Pylaiella littoralis U1_48 CDS P-littoralis_Contig101 456888..456987 -
1680789352.5372858-CDS-P-littoralis_Contig101:462584..462986 1680789352.5372858-CDS-P-littoralis_Contig101:462584..462986 Pylaiella littoralis U1_48 CDS P-littoralis_Contig101 462585..462986 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig101.116.2
>prot_P-littoralis_Contig101.116.2 ID=prot_P-littoralis_Contig101.116.2|Name=mRNA_P-littoralis_Contig101.116.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=364bp
MALVQSMDVAIDQLSPTPTTQAAHQPIMMTPIWHEQAARQEEESHKHRHE PQEQEQEQRQEQGQGQGQGQRQEKEQEHSPIQRVDTPCPAALRREQHLQA DSTTQSLSYVLLPDGSELGTRRRVIPLDAGQTTVVGRSKSSWIRDHHVSR RHVEITVPEHRHGVSTEECCRIKYIGRNCRVVLVGGILLKAEQEVPAVPG TRVILNFNNKGLPRYSYTLVPANILPSMVTSITTGRRPSGMGAAAAGGSG ASANGRRWRSESLLPFSSSSSRPASGVGESGDGGGVGGGGGVGSGAGSQQ QLHGDHAHNHLHRHTRHAALTARQKQQQQRQRPAGGRFRKESQDKLQKER DEIFRKFADLKFV* back to top mRNA from alignment at P-littoralis_Contig101:453371..463188-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig101.116.2 ID=mRNA_P-littoralis_Contig101.116.2|Name=mRNA_P-littoralis_Contig101.116.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9818bp|location=Sequence derived from alignment at P-littoralis_Contig101:453371..463188- (Pylaiella littoralis U1_48)CAGTATTTAGCCGCATTTGTTTTATACATACTACTGCTGTGTACAAGTCG
TGAACGGACAGAGGACGATCATTTGCATCATCCACGTTGCATATTCGCTT
TCACTCCATACTCGATACTGCCGCAATCCGCCCAACACCCAACACAGCCC
TGCAAGTCGCACACGCCCATCACACGATACAGAGAGAGGGCCTGCTGCCA
CC ATGGCCCTTGTTCAGTCGATGGACGTCGCTATCGACCAACTTTCACCA
ACCCCGACTACTCAAGCAGCCCATCAGCCCATAATGATGACGCCGATTTG
GCACGAACAGGCGGCTCGGCAGGAAGAGGAGTCACACAAGCACCGGCACG
AACCGCAAGAGCAAGAGCAGGAGCAGAGGCAGGAGCAGGGGCAGGGACAG
GGGCAGGGGCAGAGGCAGGAGAAGGAGCAGGAGCACTCCCCGATACAACG
AGTCGACACGCCGTGCCCCGCGGCCCTTCGGCGGGAGCAGCACCTGCAGG
CTGACAGCACAACCCAAAGCCTGTCGTATGTCTTGCTGCCAGACGGGTCT
GAACTCGGGACACGCCGGCGCGTTATTCCGCTTGATGCCGGACAGACAAC
GGTG GTGAGTGAAGAACCGTGAAGCACAAAGGTGCCAAGTCAAGTGGGTG
GCGGGGGATTTGAGAGGGGTTGACAGAGGCAGGAGGACACCACTCTCAGT
ATGCTTTGATATGATAGAGAAAACCCGGTTGGTCATTCATGATGTTGGGC
TCGCTTTATTTCTGATTTCTCGGCAGTAAAGATGACATGTGAGTAAAGTA
CCGATAGTACACTTTTCGAGACGAAGGACTTCGTTTATTACATTCGAAGC
ATCATACTTTCGAAGTACTTCTATATGTGTGAGCATAATACAGAATGTCA
ACAGCAGTTTTGTTTGTGTACGATATCATACATATCAATCGTAAACAGCA
GTCAATAGTACTCGTAGACGTACAGCAGTGTAAAACTCCCGCATGACCCC
GGCTGGAGCGCCCAACTTTTAACGAAAGGTGTAGCGTCCAGAAAAAATGG
GTGTGTAACACAAAACGCACATGTGATAGACGGGCAGCCAAGACCGCCTC
GAAAAAGTGCCTCAATGTGCTTGGCAGTAAAGACATGAGACCCTACTGGT
CGACTGTGATACCCTACTGCTGTGCTGCTTTATATTTACAGCTTACAGCT
CTACATCAGTCGTTGAAAAGCAATCGAATACTGCTGTTGTACCTGTCATT
TCCTCTTTACCTGGGCATCATATGATACAAGTGCGGCCGTATTGCCTACG
AGTACAACTGACCCACACTTGCAGCCCTATCGGTAAAAATTTACTGGTTG
TATTGTACCTTTATGTTTGTTGTTGTTGTTGTTGTTTCTCACATTAGCTC
TTTTCTAGTATCTAGCGCCCGTGGTCACACCAAATGCTGGAGCCATAGGA
AGATCCGAAGAACACAGAAAATCAAACAGAAGAGCGCCTACGCACGTCGA
AGGAAGGCACTTCTTTGGACGTATTTGTCCCTGTGTTCAGACTACTGAAT
TACGCACCACGGACAATCCTTCGGCTACAGCAGTAACCCCTGATCCCAAT
CCCTCCTCCAACCAACTCTCGGTTGCTGGCTTTATGTATGATACACCCAA
ACAACGAGCGATCCCCGTGCAAGTTCTCACGAACCATTATACCGGTATAA
TATCAACCATATGATATTTTAGAAGCAACTGCAAGTACCGCTCAGCTGCC
CACTCGCCGGCTCTCTGTCCCTGGCCCGTTGGAGTCGATACCAAACATCT
TCCGCTGCTGTGCTCGCCGCCACAGACCCAAGGGTCCACAGCAAGTAGCT
TATGCCACTAGCTGCCTCGGATGACCGGCATTTGATAACATTGATGGCTG
TGGCGGCGAGTACAGCCGCATCAAACGTTCGGTTTCGGCCAGATTGCGGA
GTTTTACAGCTACTCGACGGTATTGCTGCGGCCCTCGATATCTCCGCCCC
AGCGGCAGATTTGAGCATGCCAACATGCACGTTGGCCCGCCATGGTAACC
ACTACCGAGGTCGTCTTTCAGGTTTCAGGTCGGGACTCTTTCGGCTCCTG
TTATCTAGGCCCTTATTTCTTCGGAAACTAATGTTTACCACCCAGGCCAC
CCTTTTTAATTTGTCTAAAGACCCAGCACACCCTACAGCACTAATGACTC
GAAAATTTAGATCTTTTATGTTAGAACGTTGTTACCACCAGGACGGTATT
TTTTGTGCATCATGAGATGTGCATCGATGAGACCAGGTCTGTCGACGCAT
CTGTCGATGCAACTCAGCACGAGCACCAGCCAACATTCAAACATCTACCT
CCTGCTGCTGTAGATTACCCGCGGTAGTGCGACAACAGCAGAGAAAGGGG
GGCACACCGTCTGCTGTGTAACACTCGTACTGATTGTGTACCTGGGTGTA
GATAAAGAATCCAAACCAGAGCAACTGCCTTGCGAAAAGCCAATCTGCAA
TAAAAAAAATTGTTCAAAACTTTGTCGTATCCGGTCGCCCCGGTGGTTCA
GTGGAAACCTCAAAGACTACGGAGGGTCGGTCTTGACAGAAAAGATCCGC
ATCTAAAATCGAAACTCGAAAATCGAAAATGGCTTTCATTGGGCGATGTG
CGATGTCAGCCTTAAAAAAATTTAGCAATCCGGCTTTCTGTCGTGAATAG
CTAATCCTATGTACTCACGAAATCAATTAAGATTAGCTCAATCCATTGAA
AGTGCGGTAAAAAAACGAACAGACCTGCAAGTACATAGAACAAGAGCAGA
ACGTTGTTCGCTGTGCTTTGATGGTCACAGCAAACCGTGTAGACTCCCTC
TGAACATATGTGATACCACTGCAGAAAGCTACTCACCCCCAGAGTAGAGA
GCACTTTCTTCCAGCGAATTCTGGTGAGAATCCGAAGAACAGCTCTAAAG
TGTGCAGAAGTGTGCAGAAAATTGTTGGCCACGGCGGCTGACATTTTGGG
CTTTGGGACCTCCAAGCGGGTAGATAGGTACGGTGTTTAACACGCAGCAA
CACATTTCTTGCCGAGCCCTTCGGGTATCGATCCCAATTAAAGTGCTGTC
AACACGCCTGAATCGGGCCGACGTGGGGCACTATCGTGGACTGCTTTAGA
GAGACGGTAGCTCCCGCACTTTTCTTGGAAAAGTCCCAGCATGCAGTTCA
CGACCGTCTGTCCTCTGACTTGCTTAGTGATTCCTCGTTCCTTTACTTTT
CTGTGCCTCCGCTTTCTAGATTTTAGATTTAACGCAGCTGCGGCACATCG
GACACAACCCGCTTTCTAAAATAGACATGTTATTTCGATTTTCGATAAGG
CCCTGTGTTAACGAAAGTCGGAAAATCATTATTGAAATCATTATCATAGT
ATGATTTTTCGAAAAACCCTTCGAGCCATATTAACGAAAGAGCTGAAAAG
GCTCTTTTGAAGGCCTGTAAACGCCAGCAGAATGCAAACCTCTGATGATG
ACGACACGACGGGTATAACAGAACAATAAAATATACTGCTGTACAAAGTA
CTCCGTACAGCAGTACAGCAGTACTTGGACGCATCATGTGCGTCCTCTCG
CATGCAAGGCAAGGTCGTGGGCCCCGTGCACCAAGCCTTGATGCTGACAG
ACACCCCGTTTGTAGATGTGTGTGGTGTGTGTGTATGTGTGTTGGCTCAT
GCACTCAAGACTGCTGCTGTGTCATGTGTCTGTCTGCCATGGGCTGTGAG
AGGCGGCTTCGTGCTCGTGACCTGTGACCTGCCTGTCTGTTGGTGTCGTG
TGTGCTGATGGTGTGTTGTGCAAAATGAAATGTGGGTCATCAATCATGCA
AACTGGTGTGTTTGTTAGTTGCGCAGTCATGTGTGGTGCTAACATTGACT
TGCCTGGTGCAACGGCAAATCTCTAGACTATGCTATGTTCTGTGGCACTG
CTGTTGGTTGCCTCGGTAGTATTTGCTCTGGCCAGCCTCGTGCGCGAGGC
ACATCGTTCAGAAAAAGCCTTCTATCGGGTTAAGACCCCCAATAATGACT
AATGATTTTCTTCCAATTAAGTCTTGTTGGACTTCTTTGGTCTCGAAGGG
TTTTTCGGAAAATCATTGGCGTCGTCGGAAGGTAATAAAAGCTTGGCCAA
TCAGAGACCTTCCATGATAATGATTTATTCCAATAATGATTTTCCGACTA
TCGTTAATACAGGCCCTAATGGATACGGACATTTTCTATTAAGACCGACC
CTGAGGGTGGGTCTTGTCAAAGCGTTTTGGGCCCATTCAAAAATCAAAAA
TCAAAAACCAAACTCGGAATATGTCACTGATAGGTCAACAATTCATCCGC
CCGTACCACGTTTTGGATTTCAGTTTTATTCTTCCGAATCGGGAAGGAAA
CTAAAAAACACTTTCCTTCCCCCCAATAGATCAAAAACGCGGCTCAAAAA
CGAGTAGACCTAGAATATGTGACAGAGAGGTGTTTGCTGTGCATTCCGGG
AGCACATGGTGCACACTACATATGTTTGCTTAGCTGACCACATCACAACG
TGTAGACCCCAACTGTACACATGTGCTAGCTCCGGAAAAAGCTGGTATCA
CGCAGAATACAGATCACTTTGTTTGAGCGAATTCCGACCAGAATCCGGAG
AGCAGCACTCAAGTGTGCAGAAGTGTGCAGGAAGTTTGTTGCTCAACTGC
TGTTTGCGTAGCCGACACAGCCGCTACCTCCGAAAAAGCGCAGATGTGCA
ACACGTACTTACTCATCTCTTGCCGAGTTTTTCGGTTATCGATCCCAAAC
AAAGAACTACCAATGCGCCTGAGTCAGGGCGACGTGGGGCACCATCGTGC
TCTTCGTCTGAGGCACGACAGCTCCCGCACTTGTCTTGGAATCGAGACAC
GGCATGCTCATATCACACACCACCTGTCTGTGACCCCTGTTTTTTTTTAT
TTTATCCGCTTTTGATTTTGGACGAACGCAAGCTGCAGCAGATCGGACCC
AGCACGGAATCAAAATCAAAATCCAATTTTTTTTTTGATTTTGAATACGG
TCAAAAATTTGACAAGAGCCACCGACACCCAGGATGTGAGTTCGAATCAC
GGTGAAATCGCGCGATCTCGGATTTTTTTTTTCACACAACAGCACTTCTT
GGGAGTGGAAAACGAGTAATCAAACACCTTCGATTTGACAGAGTCGACGA
GCGTAGGACGATTGGACCCCTCTCCAATACAAAGCTGAAAGGAAAAAAAT
ACACGCACCGCAGAAGGCGGATGGAGGAAAAAAACTAACAATAAAACTGT
GTGACCTTCTGTAACCCCGGCTGGTACACCCACTTCATACCGAAAGGTGT
AGACTGGTGCCCAGAATAAATAGGACGAAAAAAAGACGTGACACACAAAT
ATCCGCACGTGTCCGGGAAGGAGTGTTGTTTTACACATCCACACATATCT
CTTTTCTGGACGCCGCTTTCCTTTCGGTATATATATGTTGGGCGCATCAG
TCAGGGTCACACAGGGGGGGAAGGTTCACGCAGGAGTTTTTTTTCCTTTT
TTTCTCCACCTTCCTTCCTTTCTTCCTTCTACGGTTCTTACCTTCGACAA
AAATTGTATCGAGAAGGGTTTGGAGGGCTATTTTGTTACCCCTCCTCGAC
GTTTGGAATCGAATTTTTGTACTCTCACAAGGTCATTACTTTCCGCTGCA
TACACAAGTCATTGTGCGAAAAAACATCCTACTTCACAAAATTCAAACTC
GAGACCTAGTTTTCAGAAGGTTTTCGACATCTTCCTACTGAACCACCAGG
GCGACCGCGCACTTAGTGGTAATGAAACCTTTTAACTCTAACCGCCTGTG
TGTTTCATTACATGACATATCGTGCCATGTATGTTTTGCCGCATTTTGTA
CATCGCTCATCCTTCATCTGTCCATCGTTTTTAGCTCGTACCGCTCCCCC
GCCTGTTGCAAGTCGCAGATTTGTTGATCCACCCTGTTCACAGACAGTGC
TCTGTGTACCACCCGCAGAGCATCTCCATATTTTTTGTACATGCCAAGCA
CCCATTTTATTGAGTTGTGGCGGCTCACTTATCATACGCACAATATTTCA
AACGCCCATGTACGAAATACACTTGTCGTGTGTTGCCCCCCCCACCCTCA
CCCCCACCCCCACCCCGCGGGCACGTGTCCGCCAATTGCGTACTTCCACA
GGTCGGGAGGTCCAAGAGCTCATGGATCAGAGACCACCATGTCAGCCGTC
GGCATGTTGAAATCACTGTTCCGGAGCACCGGCATGGAGTGTCCACAGAA
G GTGCGATACGCTCCGCCACGGCTGTATCTGTGCCGCACGGCAGGTGCTC
GGCCGGAATTCACTCTTTTTGTGGTAAAAAAATCATACGATACGATTGCG
CAAATGGTTAACTCGCGATCGGCTGGATGGCCGCCGCCTTGTAGTATTCC
GCGTGCCGACAGAGACATGGTTTGTAGGTTTAGATCAACGGTCGAATATC
TCCGCGTGTTTCATGTCGTACGCCTCTTGCCGTTTCTCTGTCTGTCTGTC
TGTCTCTCCCTCGCTCTCTGTCACGCTCTCTCTCTGTCTGATCCTGTCTC
TCTCTGTCTCTCGCCGACGTATAGAATGCTGTCGCATCAAGTACATCGGA
CGAAACTGTCGCGTCGTGCTTGTTGGCGGGATCTTGTTAAAAGCCGAGCA
AGAGGTGCCTGCGGTGCCAGGGACAAGGGTTATCCTGAACTTTAATAATA
AG GTGACTTGCCATGGTACAGCAGTAGTTTGTCTGGCCCAAGAGCACCCT
ATATGCTCGGGAGTGTATAGGTCTTTGTCTAGGCGTGAACTGCTTCGTAG
GACCATAATTGACGATGGAATGTCAGCGGCACATTACTCTCAAAACCGGG
TACCCTGCTGAGTGTGACAACCACTTTCCCGTTCCCGTGCTTGGTTCCGT
GCCATAGGCACAGTAGACTCAAGCTGTTTGAAACATCACGGACCAAAAGA
GCGGTCTGGACTTTCCAGTTCAACATCTCACACGCAAAACCAACTTGTCC
TTACAGATTCAGATAAGTTAGAGAGCCAAGCGATCGTGTGCATCGTGCGA
GCCATTCTTCCGAGATTGGTGCTAGAGCTGTGGTATTGACCCTCCCTTCC
CGGCCTTCTCCCCCACATCTCGAGCAGGGCCTCCCGCGTTACTCCTACAC
GCTCGTACCCGCGAATATTCTGCCGTCCATGGTGACATCAATAACGACGG
GGCGGCGACCATCGGGGATGGGGGCAGCGGCGGCAGGGGGTAGCGGAGCT
AGCGCCAACGGTCGACGGTGGCGAAGCGAGTCACTACTTCCTTTTTCTTC
TTCTTCTTCTCGTCCCGCGTCTGGTGTTGGTGAAAGTGGTGACGGTGGTG
GTGTTGGTGGCGGCGGCGGTGTTGGAAGCGGTGCCGGTAGCCAACAACAG
CTGCATGGCGATCACGCCCACAACCACCTACACCGCCATACTCGACATGC
CGCGCTCACCGCGAGGCAAAAGCAGCAGCAGCAGCGTCAGCGTCCCGCTG
GGGGGCGCTTTCGCAAGGAGTCTCAAGACAAG GTGTGCGTGTGTGGGTGG
TTCCCTTCCTGCTTGGTCCCGTGCTTATCTATGTTTGGCGTTTTGCATCG
TTTTGTTTTTATGGCCTGTTTGCGTTCAGTTTCGATACAGTACAGTTTTT
TTTTCGATTCACCTTGGTTTCTGTTTTCTCCCCAAAGCAGGACGCAAGAT
GAAGTTGTGTTCAAAGTACAATGTCGCCAGGGATGCTGTGTTCTCGTCCG
TATGCATTTGGTACAACACGGCCGACCCGTCCTTCTCCACGGTTCCTGGA
AGGCAATAATTGGCAAAAGTCCCGTGGAACAACTGTACGCCACCACGTGG
AAATCGGTCCCAGCCTGACGTGCCGTCTCTTTTTTCCCCTCTGCTTGCCC
CCCCCCCCTCTCGTTCGTTCCCCCGACGCAGCTCCAAAAAGAACGAGACG
AAATTTTCAGAAAGTTTGCGGACCTCAAGTTCGTTTGA TCCCATATATTA
AAACACATGGCTAAGTGTAATATAACAAGGTACGTGGCGAAGGAGGATTG
CCTCGTGGGTGTCACGTGGTTGATGTACATGGATGGAACAAACCGTGGTG
GGTTTGCGCAGGCTCGCACGGTGGACCTTTATAGGGCACAGCTAGAAGGA
ATAGAGTACCCCGACCAAACGGGGATGTGGTGTCAAGGGGAATGACTCGC
CCAGTGGCTATCGTAGCGGAACGTTTTTTGTATTGCTGTGGCTTGGGCCG
ATCGTAGTGATGATGGGTCGTGGCAGTATATGATAGCTTCTCGGGGTATG
GTGGGTTAGCTCATAGTGCAACCAAGAGCTGTTGCCTGGCCAAGACGCCG
GCAGCGGGGACGTGGAGCTCCTATTCTTGTGGCGGCTATGGTTAAGGAGG
GTTGAGCGAAGGACGCAACAAGCAGCAGTGGCCTGTGAGGCCTCCCGCCG
CCGTGGTCTTGGTCACTGGATAAAACCAGCCGGTTCGAGAGCTTTGTTTT
TCGCTGTCGTTGCCCTGATGCGTTTGGCTGGATAGCAGCTGACGGGGTGT
CGAAAGAAAAACACGAGCATCTCGGCAGAGCATAGGCAAGATCGTATCGA
AAGGAGGCGATGGTAAAAATAATTGGATTGACAAGTAGAAACAGAAAAGC
AGAGAGAGAGAGGAAGGGGAGGGGAGGGGGCATCGGAATGAAGCGAAGCG
CCAAATATCTGCGATCGGTGGCTCACCAAACCAGCATGCATGGAAGCAAA
GGGGGATTCATGGTATGAAACCGCCGTGGCCCGGATGATCATTTTTTTTT
GAGATGACAGCGCACGAAAACTCATGTAGAGGGTAAATACCGAGCACCTG
GTCGTTGAGTCAGTGACGCATCTCCTACCCGCTTTTCGAACTTATCCTAG
AACGCGTGCGCCGGAAGCGGGTGGTGGGGGCTGGAAGTTTGGTACGCGAA
ACAGGGGACTTTCACGACGCGCATTTAGAGGGGCGGTTGGCAGAAAATGT
TACCGAAGTGTAGGGACATTTCCGATAGTAGTGGAAAAAGAGAGGGAGCT
GTGCTAGCAGTGTTTGTTCACTTGGTTACTGCTGTAAGCGGCGTCGAACG
ATAGATTTCTTGTCGTCGTCTATCGTCTCGTCTGCTGCATCCTTCTTGCG
CTCTGTATTTTCGAGTACGTGGTAAGTATGATGCGCGAGTTCTTTTTCTT
GCTCTTCCCCAGCGTTAAATCTATTCAAATGTTGTTGATGTCGACACAGC
AGTATTTGTCAAAGAGCGCCCCGTGTACTTCGTGTTGTCTTCAACGAGGC
CGTGTGTCTGATTTCGCGCTGGTACGTTCGTCGCGGTTGTTGTTGCAAAT
CACCATGAATGGTGTGATGCACGTCTACCAGTTCCTTGCAAATCGAAAGG
TTGCCTGTTTTTGCTGTACGCGTATGATAAAAGTTTCTATAATGGTTGTA
CAAGCGGTCGAACACCCCGGAAACGGGTTGAAGGAGCCCTGCGGACTTTC
GACAAACGCCTGGTGATTCTGGGTTTATAAACCCTTTATCTCCATCTAGT
GCGAATCTACCATTCATTGTCGCAGAATACTCCCAGAGCCAGCTGCTGCC
TGTAACGCACCCGAATCGTCTCGCGATCTAAGTCATTACGGATCATTACT
CGTTTTCCGTGTTTGAAACGAGCCCTCCTTCATCATCGAATTCCGCGAAG
AAGGCGTACTTCGTATGTATGATACTTAAGATATTTCTTCGAAAGTATGA
TGCTTGGGAAGCACTCGG back to top Coding sequence (CDS) from alignment at P-littoralis_Contig101:453371..463188-
>mRNA_P-littoralis_Contig101.116.2 ID=mRNA_P-littoralis_Contig101.116.2|Name=mRNA_P-littoralis_Contig101.116.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1092bp|location=Sequence derived from alignment at P-littoralis_Contig101:453371..463188- (Pylaiella littoralis U1_48) ATGGCCCTTGTTCAGTCGATGGACGTCGCTATCGACCAACTTTCACCAAC CCCGACTACTCAAGCAGCCCATCAGCCCATAATGATGACGCCGATTTGGC ACGAACAGGCGGCTCGGCAGGAAGAGGAGTCACACAAGCACCGGCACGAA CCGCAAGAGCAAGAGCAGGAGCAGAGGCAGGAGCAGGGGCAGGGACAGGG GCAGGGGCAGAGGCAGGAGAAGGAGCAGGAGCACTCCCCGATACAACGAG TCGACACGCCGTGCCCCGCGGCCCTTCGGCGGGAGCAGCACCTGCAGGCT GACAGCACAACCCAAAGCCTGTCGTATGTCTTGCTGCCAGACGGGTCTGA ACTCGGGACACGCCGGCGCGTTATTCCGCTTGATGCCGGACAGACAACGG TGGTCGGGAGGTCCAAGAGCTCATGGATCAGAGACCACCATGTCAGCCGT CGGCATGTTGAAATCACTGTTCCGGAGCACCGGCATGGAGTGTCCACAGA AGAATGCTGTCGCATCAAGTACATCGGACGAAACTGTCGCGTCGTGCTTG TTGGCGGGATCTTGTTAAAAGCCGAGCAAGAGGTGCCTGCGGTGCCAGGG ACAAGGGTTATCCTGAACTTTAATAATAAGGGCCTCCCGCGTTACTCCTA CACGCTCGTACCCGCGAATATTCTGCCGTCCATGGTGACATCAATAACGA CGGGGCGGCGACCATCGGGGATGGGGGCAGCGGCGGCAGGGGGTAGCGGA GCTAGCGCCAACGGTCGACGGTGGCGAAGCGAGTCACTACTTCCTTTTTC TTCTTCTTCTTCTCGTCCCGCGTCTGGTGTTGGTGAAAGTGGTGACGGTG GTGGTGTTGGTGGCGGCGGCGGTGTTGGAAGCGGTGCCGGTAGCCAACAA CAGCTGCATGGCGATCACGCCCACAACCACCTACACCGCCATACTCGACA TGCCGCGCTCACCGCGAGGCAAAAGCAGCAGCAGCAGCGTCAGCGTCCCG CTGGGGGGCGCTTTCGCAAGGAGTCTCAAGACAAGCTCCAAAAAGAACGA GACGAAATTTTCAGAAAGTTTGCGGACCTCAAGTTCGTTTGA back to top