Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 1201 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 699 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789348.9428232-UTR-P-littoralis_Contig101:396296..396797 | 1680789348.9428232-UTR-P-littoralis_Contig101:396296..396797 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig101 396297..396797 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789348.9587893-CDS-P-littoralis_Contig101:396797..397496 | 1680789348.9587893-CDS-P-littoralis_Contig101:396797..397496 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig101 396798..397496 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig101.110.1 >prot_P-littoralis_Contig101.110.1 ID=prot_P-littoralis_Contig101.110.1|Name=mRNA_P-littoralis_Contig101.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp
YVTHIGRDIIPAERPKGLDVATWVCVGYSVIFFNLQKHQCVRLSPDKDLS
RYCSEHKERVQYVYHCFYAHQILYRCSSPEGIRLNKTIWWSFCVTHVYCC
LFVDTTGLCRPANSFAAKDGGRRAATNGEELGRSHSERELFFRRLVPQVH
SGILREQTRRTCLGRHHHQRRKDGMETPSSTTSDDAFVFLYFFFFCLLRF
LPGLLVRCRQHSRQQLTAVVCSYLLTACSSSY* back to topmRNA from alignment at P-littoralis_Contig101:396297..397496- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig101.110.1 ID=mRNA_P-littoralis_Contig101.110.1|Name=mRNA_P-littoralis_Contig101.110.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1200bp|location=Sequence derived from alignment at P-littoralis_Contig101:396297..397496- (Pylaiella littoralis U1_48)
TATGTGACGCACATCGGAAGAGATATTATACCTGCGGAGAGGCCGAAAGG
GCTCGATGTTGCGACGTGGGTGTGTGTTGGATACTCCGTGATTTTTTTTA
ACTTACAAAAACATCAATGTGTCCGGCTCTCTCCAGACAAAGATCTGAGC
AGATATTGCAGCGAACACAAAGAAAGAGTACAGTACGTCTACCATTGTTT
CTATGCGCATCAGATATTGTACCGTTGCAGCTCCCCTGAGGGTATCAGGC
TCAACAAGACAATTTGGTGGTCGTTTTGTGTGACACACGTGTATTGTTGT
TTGTTCGTTGACACAACGGGATTGTGCCGTCCAGCAAACAGTTTCGCAGC
CAAGGACGGAGGAAGACGAGCAGCGACGAACGGGGAAGAGCTTGGTCGAT
CTCACTCCGAGCGTGAACTTTTTTTCAGAAGACTTGTACCTCAAGTGCAC
AGCGGAATTCTACGGGAACAGACAAGGAGGACATGTTTAGGGCGACATCA
TCACCAGCGTCGCAAGGACGGCATGGAGACACCATCCTCGACAACATCTG
ATGATGCGTTTGTGTTTTTGTATTTTTTCTTTTTCTGTCTTCTCCGATTT
TTGCCGGGGCTACTTGTACGTTGCAGGCAGCACTCCAGACAGCAACTAAC
TGCTGTAGTCTGCAGCTACCTACTGACTGCTTGTAGCAGCAGTTATTAGT
TACAAGTCGGGCGGGAGGAGACTGAACACGATGTTGCAGTCAAATGAACG
ACGCTGGGAGTGCGTTTGCTGTTGGTACTGCTGTAACTGCTGTAGTTCAG
TGATGATGCACACGGCGTACGAAGGTGTATCTTCTTCGGTCTTTCTTGGG
TATTCCCTCATTATAGTTTCTTTCAGTCTGTTTTTTGGATCTTCCGAGGG
CTCAGCACTTTTGTGACCACGGGCTAGATTTTGGCGATGAGCTAAATGTG
AGAATCAACAGCAATCAACAACAACAGCGAGTGGTCTCCACGCGCGTGGC
TCTTCCATGTTGTTCGGTGCTTCTATTTAGTCTGCTCGGGCTGGCAAGAG
ATGACGTGGTTGTGTTGTGGATGGCTTCGAACCTTCCAACATGGACCAAT
GGGGGGATGCCCTTGGACAGAATGGGGCATAGGTTTTGGACAAACGGGGG
GAATTTATTGACAAACGGGGGTAATATATAAAATGAGTAGGGTTGTCGGG
back to topCoding sequence (CDS) from alignment at P-littoralis_Contig101:396297..397496- >mRNA_P-littoralis_Contig101.110.1 ID=mRNA_P-littoralis_Contig101.110.1|Name=mRNA_P-littoralis_Contig101.110.1|organism=Pylaiella littoralis U1_48|type=CDS|length=699bp|location=Sequence derived from alignment at P-littoralis_Contig101:396297..397496- (Pylaiella littoralis U1_48)
TATGTGACGCACATCGGAAGAGATATTATACCTGCGGAGAGGCCGAAAGG
GCTCGATGTTGCGACGTGGGTGTGTGTTGGATACTCCGTGATTTTTTTTA
ACTTACAAAAACATCAATGTGTCCGGCTCTCTCCAGACAAAGATCTGAGC
AGATATTGCAGCGAACACAAAGAAAGAGTACAGTACGTCTACCATTGTTT
CTATGCGCATCAGATATTGTACCGTTGCAGCTCCCCTGAGGGTATCAGGC
TCAACAAGACAATTTGGTGGTCGTTTTGTGTGACACACGTGTATTGTTGT
TTGTTCGTTGACACAACGGGATTGTGCCGTCCAGCAAACAGTTTCGCAGC
CAAGGACGGAGGAAGACGAGCAGCGACGAACGGGGAAGAGCTTGGTCGAT
CTCACTCCGAGCGTGAACTTTTTTTCAGAAGACTTGTACCTCAAGTGCAC
AGCGGAATTCTACGGGAACAGACAAGGAGGACATGTTTAGGGCGACATCA
TCACCAGCGTCGCAAGGACGGCATGGAGACACCATCCTCGACAACATCTG
ATGATGCGTTTGTGTTTTTGTATTTTTTCTTTTTCTGTCTTCTCCGATTT
TTGCCGGGGCTACTTGTACGTTGCAGGCAGCACTCCAGACAGCAACTAAC
TGCTGTAGTCTGCAGCTACCTACTGACTGCTTGTAGCAGCAGTTATTAG back to top
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