Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 677 |
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Cds size | 354 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789348.0216668-UTR-P-littoralis_Contig1009:6201..6408 | 1680789348.0216668-UTR-P-littoralis_Contig1009:6201..6408 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1009 6202..6408 - |
| 1680789348.0446765-UTR-P-littoralis_Contig1009:6762..6878 | 1680789348.0446765-UTR-P-littoralis_Contig1009:6762..6878 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1009 6763..6878 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789348.0340033-CDS-P-littoralis_Contig1009:6408..6762 | 1680789348.0340033-CDS-P-littoralis_Contig1009:6408..6762 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1009 6409..6762 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1009.4.1 >prot_P-littoralis_Contig1009.4.1 ID=prot_P-littoralis_Contig1009.4.1|Name=mRNA_P-littoralis_Contig1009.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=118bp
MGVLLICPLGLSAGRGRYARALGQWGNAAGNLFHVEERKLPRVDFLCLFG
FGTGFVCLKLICRPLTASSSNFSNAHTSICCVCWDIIHVLYIVAEVCCVD
CEEDQLPWIAFVKSVSS* back to topmRNA from alignment at P-littoralis_Contig1009:6202..6878- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1009.4.1 ID=mRNA_P-littoralis_Contig1009.4.1|Name=mRNA_P-littoralis_Contig1009.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=677bp|location=Sequence derived from alignment at P-littoralis_Contig1009:6202..6878- (Pylaiella littoralis U1_48)
AACAACTAGGCATGGGGCGGCCGGCGCACAACATCTCTAGGAACAAAGAC
CGCAAGCGGTGAATCGTTGAACTGATTGTGTGGAGGGCACGGTGTTCGTC
GCAGTCTACGTTTGGGATGGGGGTATTGCTTATCTGTCCTCTCGGTTTGA
GTGCAGGTCGCGGTAGGTATGCGCGTGCGCTCGGCCAATGGGGTAATGCC
GCAGGTAACCTCTTCCACGTCGAGGAAAGGAAACTACCACGGGTGGACTT
TCTTTGTCTCTTTGGTTTTGGAACGGGCTTTGTGTGTCTCAAGTTGATTT
GTCGTCCCCTTACGGCTTCCTCTTCAAATTTTTCTAATGCTCACACCTCT
ATATGTTGTGTGTGTTGGGACATTATTCATGTATTGTATATTGTCGCGGA
GGTCTGCTGTGTTGATTGTGAGGAAGATCAATTACCTTGGATAGCCTTTG
TGAAGTCTGTGTCGTCCTAACTTTCACGCTTTCATTTTGTTTTATCTTAA
TATGCGAGTTTGTGGTATTAAGACCCGCTCATGCGTGGCGTGGCGGGATT
CGGATGCGGAATGCACCAGTGGAGGTTGTTGATGGTGTCTGGGAAATTCC
TTCCATGGTCCGCCCCCGAATGGACTTGTTCTGCACGGCAGCATCAGCGT
ACGTATGTGTGTGGCATGTGTTTATCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1009:6202..6878- >mRNA_P-littoralis_Contig1009.4.1 ID=mRNA_P-littoralis_Contig1009.4.1|Name=mRNA_P-littoralis_Contig1009.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=354bp|location=Sequence derived from alignment at P-littoralis_Contig1009:6202..6878- (Pylaiella littoralis U1_48)
ATGGGGGTATTGCTTATCTGTCCTCTCGGTTTGAGTGCAGGTCGCGGTAG
GTATGCGCGTGCGCTCGGCCAATGGGGTAATGCCGCAGGTAACCTCTTCC
ACGTCGAGGAAAGGAAACTACCACGGGTGGACTTTCTTTGTCTCTTTGGT
TTTGGAACGGGCTTTGTGTGTCTCAAGTTGATTTGTCGTCCCCTTACGGC
TTCCTCTTCAAATTTTTCTAATGCTCACACCTCTATATGTTGTGTGTGTT
GGGACATTATTCATGTATTGTATATTGTCGCGGAGGTCTGCTGTGTTGAT
TGTGAGGAAGATCAATTACCTTGGATAGCCTTTGTGAAGTCTGTGTCGTC
CTAA back to top
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