mRNA_P-littoralis_Contig1006.5.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI) HSP 1 Score: 626 bits (1615), Expect = 1.510e-220 Identity = 289/350 (82.57%), Postives = 315/350 (90.00%), Query Frame = 1 Query: 535 MFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584 MFE T MW AY+M YTM L DD T +ARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGF VSGREA CV+LYRLAFPCRLKD RLVFGLSESCI E+FNWMLHFL+FKWGWLLSLDVERL P+LVEF+EAIYN+ PLTHCWGFIDGTVRGIARP RFQR YYNGHKRKHA+KFQGV+TPDG+FVD+WGPV+GTRHD+YLLAQSGLMQK+ATH NSPSGHPYCLYGDPAYGLS+HL PFS +++GPLTP+MADFN+RMSHCRV VEWGFKEMT KW FV+MKPQQK+LLSPVG QY VATLLSN HSCLNGGNQISQ+F V PP+L+EYLKV Sbjct: 1 MFEAYTDMWMAYNMAFIYTMASLVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVEWGFKEMTSKWTFVDMKPQQKYLLSPVGKQYLVATLLSNIHSCLNGGNQISQFFDVQPPTLQEYLKV 350
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE) HSP 1 Score: 600 bits (1546), Expect = 2.130e-210 Identity = 274/331 (82.78%), Postives = 305/331 (92.15%), Query Frame = 1 Query: 592 MTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584 M RL +DDTPTS+AR D T FFSPQDC+NFLRFTQ Q+MLMLDLLLIPAFIRTDC FVVSGREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FNWMLHFLDF+WG+LLSLDV RL P L+EF+EAI+NSG PLTHCWGFIDGTVRGIARPK +QR++YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRHD+++LAQSGLM+K++ NSP+GHPYCLYGDPAYGLSNHL+ PFS ++ GPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFV+MKPQQKFLLSPV QYRVATLLSNWHSC+NGGN+ISQYFGV PP+ EEY+ V Sbjct: 1 MARLELDDTPTSIARSDATAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 330
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE) HSP 1 Score: 580 bits (1495), Expect = 3.130e-201 Identity = 272/382 (71.20%), Postives = 316/382 (82.72%), Query Frame = 1 Query: 439 PLPSNHATMTRLHIRARNARKKRALVLLQCRNMFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584 P S+H + L IR R ARKKRAL+ +Q + + + T MWFA H YT+ RLA+DD PT ARR V NFFSPQDC+ F+RFT+ QI+LML+LL++PA IRT+CGFVV GREA CV+LYRLAFPC LKD RL FGLSESCICE+FNWMLHF+DFKWG+LLSLDV+RLVPKL F+EA+YN G PLTHCW FIDGTVRGIARP R +R +YNG+KRKHA+KFQGVVTPDG+FVDL+ +GT HD YLLA+S L++K+ TH NSPSGHPYC+YGDPAYG ++H+ PFS + NGPLTP M FNK MS CRVTVEWGFKEMT KWAFV+MK QQKFLLSPV QY+VATLLSN+HSCLNGGNQISQYFGV PP+LEEYLKV Sbjct: 40 PRASHHVPPS-LRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVEWGFKEMTSKWAFVDMKCQQKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 420
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5KH29_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH29_9PHAE) HSP 1 Score: 555 bits (1429), Expect = 2.020e-191 Identity = 274/388 (70.62%), Postives = 299/388 (77.06%), Query Frame = 1 Query: 550 THMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLM------------------------------------------LDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKL-VEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584 T+MW AY+M YTM L DD TSLARRD NFFSPQDCINFLRFTQPQ L+ LDLLLIPAFIRTDCGF+VSGREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FN MLHFLDFKWGWLLS+DVERL P+L VEF+EAIYN+G PLTHCWGFID T+RGIAR R+ HA+KFQGVVTPDG+FVDLWG V+GTRHD+YLLAQSGLMQK+A HFNSPSG PYCLYGDPAYGLS+HL+ PFS + GPLTPEMADFN+RMSHCRVTVEWGFKEMT KWAFV+MK QQK+LLSPVG QYRVATLLSN HSCLNGGNQISQYF + PP+LEEYLKV Sbjct: 25 TYMWMAYNMAFIYTMASLITDDVATSLARRDAANFFSPQDCINFLRFTQPQTTLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNRMLHFLDFKWGWLLSVDVERLKPRLLVEFAEAIYNAGCPLTHCWGFIDETIRGIARV----RLADTHQLSIHAIKFQGVVTPDGLFVDLWGLVLGTRHDSYLLAQSGLMQKLAAHFNSPSGRPYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMADFNQRMSHCRVTVEWGFKEMTSKWAFVDMKSQQKYLLSPVGKQYRVATLLSNMHSCLNGGNQISQYFNLQPPTLEEYLKV 408
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE) HSP 1 Score: 523 bits (1347), Expect = 8.870e-175 Identity = 244/311 (78.46%), Postives = 273/311 (87.78%), Query Frame = 1 Query: 652 FFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584 FFSPQDC+NFLRFT QI +ML+LLLIPAFIRT CGFVVSGREA CV+LYR+AFPCRLKD LVFG+SES ICE+F WMLHFLDFKWG+LLSL VE + +L+EF+EA+YN+G PL CWGFIDGTVRGIARPKR+QR++YN HK KHA KFQGVVTPDG+F DLWGPV+GTRHDNY+LAQSGLMQK+A NSPSG PY LYGDPAYGLSNHL+ PFS ++ GPLTPE+ADFNKR+S CRVTVEWGFKE+ WAFVNMK QQK LLSPV +QYRVATLLSNWHSCLNGGN+ISQYFGV PPS EEYL V Sbjct: 388 FFSPQDCVNFLRFTILQITVMLELLLIPAFIRTTCGFVVSGREALCVLLYRMAFPCRLKDMPLVFGMSESRICEAFKWMLHFLDFKWGFLLSLSVESVQLRLLEFAEAVYNAGCPLPRCWGFIDGTVRGIARPKRWQRLFYNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAM-LNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVEWGFKEICNYWAFVNMKQQQKSLLSPVAVQYRVATLLSNWHSCLNGGNEISQYFGVGPPSFEEYLGV 697
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE) HSP 1 Score: 506 bits (1304), Expect = 3.990e-173 Identity = 248/375 (66.13%), Postives = 288/375 (76.80%), Query Frame = 1 Query: 517 LLQCRNMFEIATHMWFAYHMGAAY-TMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQI-----------------MLMLDLLLIPAFI-RTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584 +L+CRN+FE+ T +WF Y++ Y M RL +DDTPTS+ARRDVT FFSPQDC++FLRF Q Q+ M L+L P I R D S ++ CV R VFGLSESCICE+FNWMLHFLDF+WG+LLSLDV RL L+EF+EAI+NS LTHCWGFIDGTVRGIARPK +QRM+YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRHD+++LAQSGLM+K++ NSP+GHPYCLYGDPAYGLSN+L+ PFS ++ GP TPEMADFNKRMSHCRVTVEWGFKEMTGKW VNMKPQQKF LSP+ QYRVATLLSNWHSC+NGGN+ISQYFGV P + EEYL V Sbjct: 1 MLRCRNLFEVYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFKQSQVIYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQD--CVSFLRFT----QSQHPXVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQLHLIEFAEAIFNSCCRLTHCWGFIDGTVRGIARPKYWQRMFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNYLVCPFSASSVGPRTPEMADFNKRMSHCRVTVEWGFKEMTGKWVLVNMKPQQKFSLSPIAKQYRVATLLSNWHSCMNGGNEISQYFGVVPLTFEEYLAV 368
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE) HSP 1 Score: 501 bits (1289), Expect = 4.410e-172 Identity = 228/291 (78.35%), Postives = 259/291 (89.00%), Query Frame = 1 Query: 517 LLQCRNMFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEW 1389 +L+CRN+FE+ T +WF Y + Y M L +DDTPTS+ARRDVT FFSPQDC+NFLRFTQ Q+MLMLDLLLIPAFIRTDCGFVVSGREA CV+LYRLAFPCRLKD RLVFG+SESCICE FNWMLHFLDF+WG+LLSLDV RL P L+EF+EAI+NSG PLTHCWGFIDGTVRGIARPK +QR+ YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRH +++LAQSGLM+K++ NSP+ HPYCL GDPAYGLSNHL+ PFS ++ GPLTPEMADFNKRMSHCRVTVEW Sbjct: 1 MLRCRNLFEVYTDIWFVYKIAFIYAMVCLELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRLLYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFILAQSGLMEKMSV-LNSPTSHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEW 290
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5L370_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L370_9PHAE) HSP 1 Score: 497 bits (1280), Expect = 2.430e-170 Identity = 231/312 (74.04%), Postives = 265/312 (84.94%), Query Frame = 1 Query: 649 NFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584 NFFSPQDC+ F+RFT+ QI+LML+LL++PA IRT+CG VV GREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FNWMLH +D K +LLSLDV+RLVPKL F+EA+YN G PLTHCW FIDGTVRGIARP R QR +Y+G+KRKHA+KFQGVVTPDG+ DL+ +GTRHD YLLAQS L++K+ TH NSPSGHPYCL+GDPAYG ++H+ PFS + NG L+ M +FNK MS RVTVEWGFKEMT KWAFV MK QQKFLLSPV QY VATLLSN+HSCLNGGNQISQYFGV PP+LEEYLKV Sbjct: 3 NFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGVVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHIMDVKLRFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYSGYKRKHAIKFQGVVTPDGLIDDLYAAEVGTRHDGYLLAQSALLEKLQTHMNSPSGHPYCLHGDPAYGQTDHVQCPFSASVNGLLSSAMRNFNKSMSQRRVTVEWGFKEMTSKWAFVGMKCQQKFLLSPVATQYNVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 314
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: D7G148_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G148_ECTSI) HSP 1 Score: 451 bits (1160), Expect = 3.110e-153 Identity = 206/248 (83.06%), Postives = 225/248 (90.73%), Query Frame = 1 Query: 535 MFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYG 1278 MFE T +W AY+M +TM L DD T +ARRDVTNFFSPQDC+NFLR TQPQIMLMLDLLLIPAFIRTDCGFVVSGREA CV+LYRLAFPCRLKD RLVFGLSESCIC++FNWMLHFL+FKWGWLLSLDVERL P+LVEF+EAIYN+ PLTHCWGFIDGTVRGIARP RFQR YYNGHKRKHA+KFQGV+TPDG+FVD+WGPV+GTRHD+YLLAQSGLMQK+ATHFNSPSGHPYCLYGD AYG Sbjct: 1 MFEAYTDIWMAYNMAFIHTMASLVADDVATRVARRDVTNFFSPQDCVNFLRCTQPQIMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICQTFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHFNSPSGHPYCLYGDLAYG 248
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5K9J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J5_9PHAE) HSP 1 Score: 435 bits (1119), Expect = 7.910e-146 Identity = 219/346 (63.29%), Postives = 239/346 (69.08%), Query Frame = 1 Query: 535 MFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLL-----------------------------------SLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGI-FVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPV 1464 M+E T MW Y+M YTM L DD TSLARRDVTN FSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGF+VSGREA CV+LYRLAFPCRLKD RL FGLSESCICE+FNWMLHFLDFKWGWLL S+D ERL P+LVEF+EAIYN+G PLTHCWGFIDGTVRGIARP RFQR YYNGHKRKHA+ FQGVVTPDG+ + W + PYCLYGDPAYGLS+HL+ PFS + GPLTPEM DF +RMSHCRVTVEWGFKEMT KWAFV+ + Q + LS V Sbjct: 1 MYEAYTDMWMVYNMAFIYTMASLITDDVATSLARRDVTNLFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLGFGLSESCICETFNWMLHFLDFKWGWLLXXXXXXXXXXXXXXXXXXFIKXXXXXXXXXXXXXXSVDGERLKPRLVEFAEAIYNAGCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAITFQGVVTPDGLDWCKSWQHTLAA--------------------------PYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMVDFIQRMSHCRVTVEWGFKEMTSKWAFVDSRSQSETSLSIV 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1006.5.1 >prot_P-littoralis_Contig1006.5.1 ID=prot_P-littoralis_Contig1006.5.1|Name=mRNA_P-littoralis_Contig1006.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=375bp MTRLHIRARNARKKRALVLLQCRNMFEIATHMWFAYHMGAAYTMTRLAMDback to top mRNA from alignment at P-littoralis_Contig1006:17218..19821+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1006.5.1 ID=mRNA_P-littoralis_Contig1006.5.1|Name=mRNA_P-littoralis_Contig1006.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2604bp|location=Sequence derived from alignment at P-littoralis_Contig1006:17218..19821+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1006:17218..19821+ >mRNA_P-littoralis_Contig1006.5.1 ID=mRNA_P-littoralis_Contig1006.5.1|Name=mRNA_P-littoralis_Contig1006.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1125bp|location=Sequence derived from alignment at P-littoralis_Contig1006:17218..19821+ (Pylaiella littoralis U1_48)back to top |