mRNA_P-littoralis_Contig1006.13.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1006.13.1 vs. uniprot
Match: A0A6H5L2E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E9_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 2.510e-8 Identity = 25/56 (44.64%), Postives = 34/56 (60.71%), Query Frame = 1 Query: 46 DGVCEGNSREARECTYKTFRNQACYDAARSLNVQGMGVQVRRGKCFEKACQALWPG 213 D V R T+ FRNQ C+DAA+ L GMGVQ+ R +CF +A +A++PG Sbjct: 93 DDVVATAERRGVSVTFNVFRNQCCFDAAKKLRADGMGVQLARKECFTQAFRAVFPG 148 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1006.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1006.13.1 >prot_P-littoralis_Contig1006.13.1 ID=prot_P-littoralis_Contig1006.13.1|Name=mRNA_P-littoralis_Contig1006.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=73bp GHLRRALSGAHSCCLDGVCEGNSREARECTYKTFRNQACYDAARSLNVQGback to top mRNA from alignment at P-littoralis_Contig1006:46594..48392+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1006.13.1 ID=mRNA_P-littoralis_Contig1006.13.1|Name=mRNA_P-littoralis_Contig1006.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1799bp|location=Sequence derived from alignment at P-littoralis_Contig1006:46594..48392+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1006:46594..48392+ >mRNA_P-littoralis_Contig1006.13.1 ID=mRNA_P-littoralis_Contig1006.13.1|Name=mRNA_P-littoralis_Contig1006.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=219bp|location=Sequence derived from alignment at P-littoralis_Contig1006:46594..48392+ (Pylaiella littoralis U1_48)back to top |