Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 426 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 426 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789346.4147043-CDS-P-littoralis_Contig1006:40658..40715 | 1680789346.4147043-CDS-P-littoralis_Contig1006:40658..40715 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1006 40659..40715 - |
| 1680789346.426616-CDS-P-littoralis_Contig1006:40903..41092 | 1680789346.426616-CDS-P-littoralis_Contig1006:40903..41092 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1006 40904..41092 - |
| 1680789346.4375503-CDS-P-littoralis_Contig1006:41329..41509 | 1680789346.4375503-CDS-P-littoralis_Contig1006:41329..41509 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1006 41330..41509 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1006.12.1 >prot_P-littoralis_Contig1006.12.1 ID=prot_P-littoralis_Contig1006.12.1|Name=mRNA_P-littoralis_Contig1006.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=142bp
MLPVCLWLKHHKRSGKVKTGTSAQAFVWVREWLATSEYAGIVGFDTTPYS
IGHIFVRLLKHKNYFCLDVAGMQKKAKVYSIQSCEWGDTYIDLFKSLPLQ
WSATRLPDTSMVFSRDDQGAIVKVTVEKPDLGGRGSVKSITL back to topmRNA from alignment at P-littoralis_Contig1006:40659..41509- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1006.12.1 ID=mRNA_P-littoralis_Contig1006.12.1|Name=mRNA_P-littoralis_Contig1006.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=851bp|location=Sequence derived from alignment at P-littoralis_Contig1006:40659..41509- (Pylaiella littoralis U1_48)
ATGTTGCCTGTGTGCCTCTGGCTCAAGCACCACAAGCGGTCAGGCAAGGT
CAAGACAGGAACCTCCGCCCAAGCGTTCGTATGGGTGCGTGAATGGCTAG
CCACCTCGGAGTATGCCGGAATAGTGGGATTCGACACGACGCCCTACTCG
ATTGGACACATATTCGTCCGCCTTCTGAAGGTACGGGATAATTGTGTCGT
AGACGGTTGGCCCGAGTGGGTCTACGTGCATCTGATTTTTTATTTGGAAA
GACAGCTGTGATCACAAGTGTATCGCACCCTAAACCGAAGCTTCGCGACT
GTTGGATCGATCTTTGAGTACGAGAGCTTTCCATTTGATGTCTTATATTT
CTACCTGCGCACCCCTCCGCCCGTTCCCCTGTGTTCTCCTCGGCTACCGT
TGTACTTCACCCGAAAGCACAAGAACTACTTCTGTCTGGACGTGGCTGGT
ATGCAGAAGAAAGCGAAGGTGTATTCCATCCAGTCGTGCGAGTGGGGCGA
TACGTACATCGACCTCTTCAAGTCGTTGCCCTTGCAATGGTCCGCGACGA
GGCTACCGGATACCTCGATGGTCTTCTCAAGAGATGACCAAGGAGCAATC
GTGAAGGTCAGGGTCGCCTCAATCTTGCGTGTCAGTGGTCGACGATTGTG
TTTGTCCCCGTCGGCGCCTAATATTGAAGTGCCGAAGTATGTAGAGGATA
ATATACTGTATGCTTGAATCGATTTTCGGGCAGGGGCCCGTATTGATTAT
TGTTTTGCGCTTTCCGGTGTTTCCGATGCTGCGGTATGGTCCAGGTCACC
GTCGAGAAGCCGGACCTAGGCGGTCGCGGGTCAGTCAAATCCATAACGTT
G back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1006:40659..41509- >mRNA_P-littoralis_Contig1006.12.1 ID=mRNA_P-littoralis_Contig1006.12.1|Name=mRNA_P-littoralis_Contig1006.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=426bp|location=Sequence derived from alignment at P-littoralis_Contig1006:40659..41509- (Pylaiella littoralis U1_48)
ATGTTGCCTGTGTGCCTCTGGCTCAAGCACCACAAGCGGTCAGGCAAGGT
CAAGACAGGAACCTCCGCCCAAGCGTTCGTATGGGTGCGTGAATGGCTAG
CCACCTCGGAGTATGCCGGAATAGTGGGATTCGACACGACGCCCTACTCG
ATTGGACACATATTCGTCCGCCTTCTGAAGCACAAGAACTACTTCTGTCT
GGACGTGGCTGGTATGCAGAAGAAAGCGAAGGTGTATTCCATCCAGTCGT
GCGAGTGGGGCGATACGTACATCGACCTCTTCAAGTCGTTGCCCTTGCAA
TGGTCCGCGACGAGGCTACCGGATACCTCGATGGTCTTCTCAAGAGATGA
CCAAGGAGCAATCGTGAAGGTCACCGTCGAGAAGCCGGACCTAGGCGGTC
GCGGGTCAGTCAAATCCATAACGTTG back to top
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