Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 839 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 456 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789345.6272652-CDS-P-littoralis_Contig1005:25579..26035 | 1680789345.6272652-CDS-P-littoralis_Contig1005:25579..26035 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1005 25580..26035 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789345.6372097-UTR-P-littoralis_Contig1005:26035..26417 | 1680789345.6372097-UTR-P-littoralis_Contig1005:26035..26417 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1005 26036..26417 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1005.6.1 >prot_P-littoralis_Contig1005.6.1 ID=prot_P-littoralis_Contig1005.6.1|Name=mRNA_P-littoralis_Contig1005.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=152bp
MSLESYVVDERIVGTQRLFIQRGRGERSWVVVRDVEERRRLDVEEQTRFF
IAFFPSVVLAVFLKLDNVTKSTVLCSPPGSHSISYSVTHFRLFLFAFACV
AWLTVVNPGLGPTRSAVFYRCSPNLFSLEHDTSCLAPGGTVVTKNRYLPA
RH back to topmRNA from alignment at P-littoralis_Contig1005:25580..26417- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1005.6.1 ID=mRNA_P-littoralis_Contig1005.6.1|Name=mRNA_P-littoralis_Contig1005.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=838bp|location=Sequence derived from alignment at P-littoralis_Contig1005:25580..26417- (Pylaiella littoralis U1_48)
CAGGCGTGCTACAACGAGGCCAAATCTCTGGGGGCGCATGGCTATCGGGT
TCAACATAGCCGCCGCGATTGCTTCACGCATGCATGTTCCAGGGCTGTTT
TTCCTGGGAATGGAGTGCAGAAATGGGTCGAGACAGCTTTAAGTCGCAAC
GACGTGTAACGGCAACAATTGCCATCTTGCCGCCCGGAAATATGTCGAGA
GAGCTGAATGTGCGCCAGCTCATACGTGGCTCGTGTGGTTGGACGGGTTG
CGTGCGGGCCGTGTTGGAGTTTGCTGCTGCTTTGGCAGTACATATTTAGC
CCTTCTCCCATTTGCTTACGGAAAACTAGCCCACGATCAGCGTACTGCTT
TTGTGCTTTCTTTGACGTTCTTTTCATCGTGAATGAGCCTGGAATCGTAT
GTTGTTGATGAGAGGATTGTGGGAACCCAGCGTCTCTTCATACAGAGAGG
TCGTGGAGAGCGCTCGTGGGTTGTGGTTCGAGACGTTGAAGAGCGAAGGC
GTTTGGACGTTGAAGAGCAAACACGTTTTTTCATTGCCTTTTTTCCCTCT
GTTGTCTTGGCGGTATTTCTGAAGCTAGACAATGTTACAAAGTCCACTGT
CTTGTGTTCCCCGCCAGGTTCTCACTCGATTTCCTACAGTGTGACACACT
TTCGGTTGTTTTTATTTGCCTTTGCTTGCGTTGCCTGGCTTACGGTGGTG
AATCCTGGCCTTGGCCCCACCAGGTCTGCTGTCTTTTATCGTTGCTCCCC
TAACCTTTTCAGCCTTGAACATGACACCTCTTGTTTGGCCCCGGGGGGAA
CGGTTGTTACAAAAAATAGGTATCTCCCGGCGAGACAC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1005:25580..26417- >mRNA_P-littoralis_Contig1005.6.1 ID=mRNA_P-littoralis_Contig1005.6.1|Name=mRNA_P-littoralis_Contig1005.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=456bp|location=Sequence derived from alignment at P-littoralis_Contig1005:25580..26417- (Pylaiella littoralis U1_48)
ATGAGCCTGGAATCGTATGTTGTTGATGAGAGGATTGTGGGAACCCAGCG
TCTCTTCATACAGAGAGGTCGTGGAGAGCGCTCGTGGGTTGTGGTTCGAG
ACGTTGAAGAGCGAAGGCGTTTGGACGTTGAAGAGCAAACACGTTTTTTC
ATTGCCTTTTTTCCCTCTGTTGTCTTGGCGGTATTTCTGAAGCTAGACAA
TGTTACAAAGTCCACTGTCTTGTGTTCCCCGCCAGGTTCTCACTCGATTT
CCTACAGTGTGACACACTTTCGGTTGTTTTTATTTGCCTTTGCTTGCGTT
GCCTGGCTTACGGTGGTGAATCCTGGCCTTGGCCCCACCAGGTCTGCTGT
CTTTTATCGTTGCTCCCCTAACCTTTTCAGCCTTGAACATGACACCTCTT
GTTTGGCCCCGGGGGGAACGGTTGTTACAAAAAATAGGTATCTCCCGGCG
AGACAC back to top
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