mRNA_P-littoralis_Contig1005.3.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 1289 bits (3335), Expect = 0.000e+0 Identity = 671/1130 (59.38%), Postives = 814/1130 (72.04%), Query Frame = 1 Query: 1 LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHHRLCLCAVRGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAAT------------------------------------PAGF-------------PVADGIGEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELP----------------------------DNRLSRSRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159 LK+ TLN+NGV++KK L+R+L ++CIALQETTLT TDWALN+PGYRTF VYGERT STRG AIL++N +GAQT+ + + H C GK PLRT+R+Q+R LR ++P DSI+LMGDFNR+R V++W I+V EL KDA+LGTR+HGSKR IDH+++ +AHP+D LR PRV+RKVDISDHYP+VSTFRSDRADA+T P G P+AD I EG +L D A+ DAAA+RMV+ + QVA+ TK +R PALK IARAIDDRG++YR A++ R + AW Y E + AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+ GLQPV+HPD+ L+T A DISA+W+THY+RLA+DVTGNSR D+W W AAPQR H+ LD PI E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP GN +ER R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG RRL PDRWKLAG LPIV YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+ A VS+VALWREL+IPPICASAAARRAR +QKAS +KTW+A+++ P+KHR+WTW TGT RWMNRY HRLA D+LP + R++ S+TA Y GHA L EGLA IIRCR+GGFWGAGRLSRR ++HPRY +CPCC EE LAHVLFDC W E R+ LL LIA A+ I+GSA+SG ++KVALLLGGK Sbjct: 33 LKVATLNINGVKSKKIQLQRVLAMYRINCIALQETTLTVTDWALNVPGYRTFAVYGERTSSTRGAAILLRNKMGAQTVG----------KSSPWHTFVRCYG---LGKVPLRTVRNQMRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYESIRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADASTGDSVGVPINARTIQRGERINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLPAKMRRPGGWIKMNPQELSRCITAVVWEREERVAWSKTADDYKQMHFETNPLAAARAAGHATLEEGLALIIRCRVGGFWGAGRLSRRGMIHPRYKRMCPCCKRRVEEDLAHVLFDCPTWSEARNGLLAPLIAAANAIVGSADSGYGKKKVALLLGGK 1149
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 445 bits (1144), Expect = 1.930e-135 Identity = 333/1005 (33.13%), Postives = 492/1005 (48.96%), Query Frame = 1 Query: 325 EPLRT-IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAEL---GTREHGSKRTIDHMVSMMAHPEDHLRRPRVI---RKVDISDHYPLVSTF--------------------------RSDRADAATPAGFPVADGI-----------------GEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRR-ARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIH--------------------RLASWIPDELPDNRLSRSRTAA---W--YIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 3057 EP R +R +L +LRE+FP+D+IV+ GD+N ++D LRR + +DA GT GS R IDH V+ L P + D SDH+P+ ++ + R D + P D + G + D +D A AD + TA +V V++ R P L+ SI AI R + ++ RG ++ A Y + + +VR +RR+ +A+ A R + FWK++ +A + QPV P +GVL T +I+A W HY L D R+ W P P L ++ PI EL +AL RL +KASG DG+ A+ LKLA +SP K+LL ++N +W + +P++W S VVSI KKGDV M+NYRGIS+M ++K+L+ +++ RL + + + L Q GF EEC Q A + +IA RR+ T+ F+DL+KAYDT+PHE LF+KL+ G+ G+ML F++ LY +S + V+TG+ + S+ ++RG+RQGCP SP+LFNIFINDI DG E LG V G + + RV G LFADD V +A + + L + ++W +++ M G+ KCGVMA+G + L DRW+L G +P+V EY YLG + N L + ++G+++ R V A+ L R IP+ +R +V++ ILP L +G EV+GM +R+Q +N+ R + GVGA A V+ L REL I PI A AAA R RA KA ++ T ++ +V P + R TW +GT RW++R+ R+AS + R S +A W Y A GL +I+ R F A RL+R + R+L CP C E++ H+L +C RW R Sbjct: 23 EPYRCRLREELAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVFASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSID--ADADGFVQAVWSTARRVGA---VSRTRRKSLGPPLQRSILGAIARRRHAFLALCQEARGPI--QSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASAELAQNVRVPPAWRSLQPRVASNLVKAAVWGRFETSSSACTNTWSIYSQASYVGNPLPQYGTGIPAGAVAGLHIMIQLRTRVFPTARRLARIHAMPERFLHHCPACGGDVIESIEHILLECPRWEYHR 1018
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 454 bits (1168), Expect = 6.100e-134 Identity = 344/1079 (31.88%), Postives = 522/1079 (48.38%), Query Frame = 1 Query: 1 LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHH----RLCLCAVRGRAGKEPLRTIRSQL---------RRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAVADAAATRMVDTAFQVAK-----AHRVTKLREPKR--KPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159 LK+ T N+ G +K+ L +L++ IALQET L A L + Y T RGLA+ ++ G G L L A+I+ H R L V P +TIR +L R++R++ + I+L+GDFN+ L R ++ +R G+R +G+ R IDH ++ P + +VI+ VD+SDH P+V+ + + P + I E ++R A+ D + D A A+ A ++ ++E K+ K L AI R K+++ G N + + Y K+ A R DRR ++ A M T+ P+ W + +G + S + L+TG + S +W H+E LA D TGNSRS ++W + + D +T E+ AL +K+ G DG+P++ KL + SP AK ++N +W+ + IP++ S +V IPKKGD+ D NNYRGISL+ T+ KVL II+ RL++ +H++ QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ G + I LY + ++ VR GD S+ GVRQGCP SP+LF+IFIND+LDG + GV V G + E + GLLFADD V +A + L ++LT W + EM KCG+M I ST L + + G + V EY YLG+VFN K + + N G + +M FL R IP MR+A+VR V++P L +G E++GM +Q + A RLVAGVG S A+ + EL I I + R R K + KTW++ ++N P K+R TW +GT RW R++ S + R R S+ W + + A G+ + + R+G + A L+ L+ + T CP C +E +T+ H+L C +W R + + I + + NSG Q ++ LLGG+ Sbjct: 644 LKVMTYNIRGYISKREELDLVLKQNRPSVIALQETNLNAKTNRLRLQEYVTVESKSHLRAGGRGLALGIRKGSGLSISELIQTPHWLAAKISGAHENDKRFSLACVNLHM---PHQTIRRKLVIIGLTRFLRKMRQKKKKSKIMLIGDFNKDTESTISMLNRIGIGLRRATVRNSK---GSRMNGAVMGRMIDH-ITYSGFPNNPTYA-KVIKSVDLSDHLPVVAEWDMEALKIPAPQRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAADELSCIKEEKQRFKTVLSKETLNAIQRRRKLFK------GISKNPSLS-EEYSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRIR--NELKIDEINTRVSVARERGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRFLKGADSKTTAQALRARKIRNDHSKITQWVMKNNLGLTSNWMGLELAYPEHARGIRLMAKVRMGAYMTAKSLANSRLILEEFKTKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1688
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG) HSP 1 Score: 440 bits (1131), Expect = 2.170e-131 Identity = 330/1078 (30.61%), Postives = 520/1078 (48.24%), Query Frame = 1 Query: 1 LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHHR---LCLCAV------RGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGE-GEGDLDELDRQAVADAA------ATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159 LK+ T N+ G K+ + L ++ +ALQET L A L + GY+T RGLAI ++ G+G + + A IT R + L + + K + + LR+LR + +D I+L GDFN+ L R ++ + G+R +G+ R IDH+ ++ +P +V++ VD+SDH P+++ + + D+ T + I E GE + A+ + +R+ ++ A+ K+ + L +A + R K ++R GD T Y + K+ + L R DRR ++ A + + W + +G R G PV + D L+T + W TH+E+LA D TGNSRS D+W T A P D P++ E+ +AL +K+ G DG+P++ KL ++ SP+AK + I+N +W + +P++ S VV IPKKGD+ D NNYRGISL+ T+ KV+ I++ RL ++ + + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ + I LY + ++ VR G S+ GVRQGCP SP+LF+I+IND+L G + GV + G + +SGLLFADD V +A + L ++++ W Q+ EM KCG+M I STR L + + G + V Y YLG+VFN K + + N G + + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ L EL I I + R R +K ++KTW++ +++ PFK+R TW +GT RW R++ + + R R S+ W I + A G+ + + R+G F A L+ + Y CP C +E ET+ H+L C +W R + + I + + + N G Q ++ LLGG+ Sbjct: 198 LKVMTFNIRGYIGKREEVDLLFQQYQPTILALQETNLNAKSNRLRLQGYQTVESKSHLRAGGRGLAIGVRKGLGLSISEMTQTPHWMAAEITGTSRGKKMTLLIINIHMPHQTNRRKLVIAALTKYLRKLRIKGRKDKIMLAGDFNKNTDSTVALLNRIGIGLRRATVTNSK---GSRMNGATMGRMIDHISFSGLINNPN----YTKVLKSVDLSDHLPVMAEWNIEALDSPTVPRKINVESIKELGESFVSNNRFAALTEPEFNIEDLTSRLTKGIWESAEEVNAIKIEKISNSTVLSKETIKATNKRRKAFKR---LIGDPRTATE----YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFLKGAGNKTTAQALRARKIRNDHSKITEWVIRNNLGLKSNWMGLELAYPEHARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWSSQRSNCIGAFIGDNTSNLNLQNLGV-QPLLSRLLGGE 1240
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG) HSP 1 Score: 432 bits (1110), Expect = 2.340e-130 Identity = 324/1076 (30.11%), Postives = 515/1076 (47.86%), Query Frame = 1 Query: 1 LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHH----RLCLCAVRGRAGKEPLRT------IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAV-------ADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159 LK+ T N+ G +K+ + L + I LQET L A L I GY+T + RGLAI ++ +G L+ + +I+ H +L L V + +R + + LR+LR + + I+L+GDFN+ L R ++ + K + + G R IDH+ + A+ ++ + V++ VD+SDH P+++ + + P + + + +R AV + + + ++ A+ K + + L I R K++++ K + Y E K+ + +L R+DRR + A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W + + D P++ E+ AL +K+ G DG+P++ KL + SP AK LL ++N +W + IP++ S VV IPKKGD+ + NNYRGISL+ T+ KV+ IIS RL + ++N+ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+RG + I LY + ++ VR GD S+ GVRQGCP SP+LF+IFIND+L G + GV + G + E ++GLLFADD V +A + L ++L+ W + EM KCG+M I ST L + + G ++ V EY YLG+VFN K + + + G + +M FL + IP MRVA++R V++P L +G E++GM + +Q + A RLVAGVG S A+ L EL I I + R R K +S KTW++ ++ PFK+R TW +GT RW R++ + + R R S+ W + A G+ + + R+G F A L+ + Y CP C +E +T+ H+L C +W R + + I + + NSG Q ++ LLGG+ Sbjct: 20 LKVMTFNIRGYVSKREEIDLFLRQYQPTLITLQETNLNAKSNRLRIQGYQTVESKSQLRAGGRGLAIGVRKELGLSISELSQSPHWMATKISGTHSSGEKLSLIVVNLHMPHQTMRRKLVIWGLTNYLRKLRSKKKKTKILLVGDFNKDIKSTVSMLNRIGIGLRRAVVSNSKGSRMNNATMG--RMIDHVAYTGFANNPNYAK---VLKSVDLSDHLPVIAEWNIESLKIPLPPKRIDTEKMKKQGTRFISDNRFAVLASLEPNTENLVNSVTTSIWETAEELDALKTMKAGYRRVLSNETLETIRKRRKVFKKLSKD-------PSLAIEYSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFLKGAENKTTAQALRARKIRNDHSKITEWVTRNNLGLTSNWMGLELAYPEHARGIRLLAKMRMGAFMTAQSLANSRFISDDYKLKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1064
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 424 bits (1090), Expect = 1.330e-124 Identity = 292/866 (33.72%), Postives = 429/866 (49.54%), Query Frame = 1 Query: 718 ELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAA-----------------YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSRSRTAA------------------WYIAXXXXXXXXXXXXXXG-HAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCME--TEEETLAHVLFDCSRWREGRDSLLHGLI 3081 E D D AA R+V T +VA+ + L++ +P S A G+ + +TR A + A + Y T+ A+ VR++ R +W K +Q +R D K W++ S AG+ + QP+KHP + ++T +I+ +W ++ LA D TG+ W + ++ P P L L+ P+ E+ ALL +K KA G DG+ ADFLKL G D G ++ PMA L +L MW + +P W + VV I K +GD +M NYRGISL+ VLK+L II+ RL ++ N H QAGFR +EEC+ L E+ +RR++ + ++L F+DLKKAYDTVPH ALF KL+ GVRG L FI+ LY +S +S R L+RG+RQGCP+SP+LFN+FINDI+D LGV V G + R T + GLLFADDLV ++ ++L Q D +T W + EM G+ KC +M I + LSS D+W L G +P+V EY YLG + + LD++ + ++ + + +++PFL CR IP+ +R V ++ P L+GAE++G+R+ T + A + +AG L REL IPP+ A AAARR RA K S+KTWV+T+ P + R+ TW TG W+ R+ IPD PD+ S++ T W+ + H G +I+ R F A +LS + Y+TLCP C + E++ H+L +C+ W + R L LI Sbjct: 451 EEDSDLDVDDAAKRLVSTIQRVAQECHI--LKDAGERPPAGKSHTSAASSTGRAAHLSHRTRSLIARKRALFLKLQRIPHGSERWERTMREYLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRFR------IPDVGPDSSPSQAATQICQWIWERDRAKDHSHAWDWFHSCHFEHTSSMLFNLASLHIQWTPGFNAMIQMRTRSFLTARKLSIIGKLPSLYMTLCPFCRNEHAQGESIPHLLVECAAWEKWRRIYLQDLI 1300
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG) HSP 1 Score: 417 bits (1071), Expect = 1.860e-124 Identity = 319/1073 (29.73%), Postives = 500/1073 (46.60%), Query Frame = 1 Query: 13 TLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARIT-VHH---RLCLCAV------RGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRP---RVIRKVDISDHYPLVSTFRSDRADAATPA---GFPVADGIGEGEGDLDELDRQAVADAAATRMVDTA----FQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159 T N+ G K+ + ++ + +ALQET L A L + GY+T RGLAI ++ +G L + ++ VH+ +L L + + K + + LR+LR + + IVLMGDFN+ L R ++ ++ G+R +G T+ M+ +A+ L P +V++ VD+SDH P++S + + P IGE + A D+ +VD+ ++ A+ K + + L I R KM+++ K + Y + K+ A +L R+DRR ++ A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W D P++ E+ AL K+ G DG+P++ K ++ SP AK L ++ +W + IPE+ S VV IPKKGD+ + NNYRGISL+ T+ KV+ II RL + ++++ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPHEAL K+ G+ G + I LY + ++ VR G S+ GVRQGCP SP+LF+I+IND+LDG + + +P + GLLFADD V +A + L ++LT W + EM KCGVM I ST L + + G + V +Y YLG+VFN K + + N G + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ L EL I + + R R K ++ KTW++ ++ P K+R TW +GT RW R++ + +R R S+ W I + A G+ + + R+G F A L+ + Y CP C +E +T+ H+L C +W R + + I + + NSG Q ++ LLGG+ Sbjct: 2 TFNIRGSIGKREEVDLVMRQYQPTILALQETNLNAKSNRLRLQGYQTIESKSHLRAGGRGLAIGVRKELGISVSELRQTPHWMAGAVSGVHNNGEKLKLFVINLHLPHQTNRRKLAILELTKYLRKLRSKKRKAKIVLMGDFNKDTNSTISMLNRIGIGLRRADVNNSK---GSRMNGV--TMGRMIDHVAY-SGFLNSPNYAKVLKSVDLSDHLPVISEWNIESLKTPVPPKRIDTAKMKEIGESFISNNRFSVLADQDSNTENLVDSVTTSIWETAEELDALKTTPSEYRRVLSNETLETIRKRRKMFKKLAKDPSIEME-------YSDLKEKAIQLCREDRRNNRKAEVKKACDLMLGNKSRELWSWLKRFSGRFRSSLVEG--PIFDKNK-KLVTESEKKAEVWAAHFEELAKDSTGNSRSAEKW-HGMGNDSAGVFTECDTPLSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKIPGIDKGIP------GLLFADDAVVLAESPAELQIALEKLTAWSLKWEMQINQEKCGVMGINSSTGML------FTIMGKTIAQVSDYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDVFTRVSVARERGHNKWTTSKTWISDLITQPLKNRLDTWVSGTVRWEKRFLKGSENKTTARALRSRKIRNDNSKITQWVIENNLRLTSNWMGLELAYPEHARGIRLLAKVRMGAFMTAQSLANSRFITEGYKVKCPFCNGSEADTVEHMLLRCQKWNSQRSNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1042
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG) HSP 1 Score: 405 bits (1041), Expect = 1.610e-120 Identity = 314/1050 (29.90%), Postives = 499/1050 (47.52%), Query Frame = 1 Query: 130 LNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHHRLCLCAVRGRA-------------GKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSD---------RADAATPAGFPVADGIGEGEGDLDELDRQAVADAAATRMVDTA----FQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTG----SGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQW----VKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159 + + GY+T RGLAI ++ G+G +S++ + Q + + + R A K ++ + LR+L + + I+L+GDFN+ L R ++ +R G+R +G++ R IDH+ S A+ ++ + V++ VD+SDH P+V+ + + R DAA + +GE A D+ +V++ ++ A+ K + L I R K++++ K + Y K+ +L RQDR ++ A M S ++ W ++ +G S + L+T + + W +H+E LA D TGNSRS +W +TA D P++ E+ AL +K+ G DG+P++ K+ + SP+AK +L ++ +W + IP++ S V+ IPKKGD+ D NNYRGISL+ T+ KVL II+ RL + ++++ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPHEAL K+ G+ G + I LY + ++ VR GD S+T GVRQGCP SP+LF+I+IND+LDG + + +P +E + GLLFADD V +A + L ++LT W Q+ EM KCG+M I ST L + + G + V+EY YLG+VFN K + + N + +M FL + +P MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+S L E+ I I A+ R R K ++ KTW+ ++N PFK+R TW +GT RW R++ + + R R S+ W I + A G+ + + R+G F A L+ + Y CP C +E ET+ H+L C +W R + + I + + NSG Q ++ LLGG+ Sbjct: 1 MRLKGYQTVESKSHLRAGGRGLAISVRKGLG---MSISEILQTPHWMVASVSGIYSNSERMTAFVVNLHMPHHTSRRKLVIKDMTKYLRKLCARNKKAKILLIGDFNKDINSTVALLNRIGIGLRRAVVRNSK---GSRLNGARIGRMIDHIAFSGFANNPNYAK---VLKSVDLSDHLPVVAEWNIESLMSPVLTKRIDAAK------INELGESFTSCSRFAVLADKDSNTENLVNSVTKSIYETAEELDALKTIASDYRTVLSKETLETIRKRRKVFKKLSKDPSVEVE-------YSGLKEKTIQLCRQDRMNNRKVEVKKACDLM------ICNKSRELWSWLKRFSGRFSSSLVDGPIFDKNRQLITDSEAKAEVWASHFEELAKDSTGNSRSAKKWRDIGKNYTA-----EFTECDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP----GIEEC--IPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFLKGAGNNTTAQALRARKIRNDHSKITQWVIKNNLGLTSNWMGLELAYPEQARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWNSQRSNCIGTFIGDNTANLNLQNSGV-QPLLSRLLGGE 1002
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO) HSP 1 Score: 391 bits (1004), Expect = 3.860e-117 Identity = 242/755 (32.05%), Postives = 385/755 (50.99%), Query Frame = 1 Query: 931 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI--------HRLASWIPDELPDNRLSRSRTAAWYIAXXXXXXXXXXXXXXG--HAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKV--ALLLGG 3156 W ++EE A++ ++DR++ K L + ++ K W + +A +R +PV D L+ G +I +W++H+E+L+ D G S+ + W K P L D+PIT E+ AL + KA+G DG+P +F K+ D ESP + ++ ++ +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN + + QAGFRK EEC+ Q C EI +RR L+ K T +F+D KKAYD VPHE LFAKL YG G +L F+ +LY N + SVR GD S+TF + GV+QGCP SP LFN++IN+IL+G +G+ GN + V GLLFADD V A + + + + L W + +M I KCG+M + +R K AN+P V Y YLG+ NR LD++ ++ ++ + + + P + +IP+P+RV +++ V++P FG+E+YGM T +Q ++KA R A+ + + E+ I I AA R RA K + +T ++ ++ T FK + TW TGT RW+ R + + D L + +RS++ + + G + + R G F RL++ + Y C C + E H+L+ CS+W + R+ G D I + +Q ++ +LLGG Sbjct: 93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPAN--YCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLLKNDTLNSTQEGVKKVEDALTTGKYARSKSKIREKRRKLVFGSSISNWKETVKNYRVNRGWHVLTKIRTGTFMFGYRLAKYGRISSEYKKKCIACEKHGREDGIHLLWHCSKWEKEREECYRGFNNSDDQKIRNLFDKNSQDELLEGVLLGG 828
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1X253_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X253_9FUNG) HSP 1 Score: 384 bits (986), Expect = 1.030e-115 Identity = 221/668 (33.08%), Postives = 359/668 (53.74%), Query Frame = 1 Query: 1174 WKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDE------LPDNRLSRSRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159 W H+E LA D +GNSR +W + Q + D IT ++ +AL +KA+G+D +P++F KL + + +AK ++ +W +PE + S V+ IPKKGD D NNY+GISLM +++K++ I S RL E +HNL QAGFR +EECV+QA L E +RRK++ T++ F+D KA+D VPH+AL KL + G++ I LY N +I +R G+ SET + GVRQGCP SP+LF++FINDIL+ + + +P E + + GLLFADD V +A + L +++++W ++ EM KCG + IG ST + + + G +P V EY YLG++FN++ + + N + ++ M FL ++IP+ +R ++R V+LP +G E++GM +A +++Q ++ A RLV G G +AA++ + EL I P+ A R RA K +TW++ ++ P K + TW +GT RW+ R+ + P E L + + + W + ++G+ II+ R G + A +L+R ++ YL CP C E + E++ H++F+CS+W R + + + ++ + T Q + LLGG+ Sbjct: 48 WAKHFEELAKDFSGNSRKSTKWESMGVS-QVMYFEECDNTITWKDITKALKSTPNNKAAGKDRIPSEFWKLVEEESFPTTNLAKLFYKLIKNIWDSAYVPEIFNTSIVIPIPKKGDRRDPNNYKGISLMPSIIKIVTKIASHRLAEMDLKHNLLIKEQAGFRTREECVSQATVLYEAVRRRKIKSLPTWIGFIDFAKAFDRVPHQALLYKLKKLNIGGHLHKVISALYKNPKIQIRFGNALSETVEYECGVRQGCPASPMLFDLFINDILEAIKGVYIP------ELEGNIRGLLFADDAVVLAESPAELQIAFEKISQWSKKWEMKVNASKCGAIGIGQSTNMI------FTVQGGIVPQVEEYKYLGIMFNKRWNHVSAIKNNTDNARKALNGMYYFLARKKIPIALRTIIIRSVLLPIATYGGEIFGMSQARNNKIQSILDTATRLVLGAGKTAAITRIR--EELRITPVNTKTAISRERAYYKWHKSRTWISDLIEFPMKSKLATWVSGTQRWIKRFCSENS---PGETLKALTLRTRKKDSTMISNWIESNNIGRVRNIIGLEMLFPEHSKGIMQIIKIRTGTYNFAYKLARSQVIGREYLMKCPFCNEIKPESVEHLIFECSKWTSERREYMGDFLPNKNNLLPGS---TDTQLLGKLLGGE 694 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1005.3.1 >prot_P-littoralis_Contig1005.3.1 ID=prot_P-littoralis_Contig1005.3.1|Name=mRNA_P-littoralis_Contig1005.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1053bp LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRback to top mRNA from alignment at P-littoralis_Contig1005:11309..14723- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1005.3.1 ID=mRNA_P-littoralis_Contig1005.3.1|Name=mRNA_P-littoralis_Contig1005.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3415bp|location=Sequence derived from alignment at P-littoralis_Contig1005:11309..14723- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1005:11309..14723- >mRNA_P-littoralis_Contig1005.3.1 ID=mRNA_P-littoralis_Contig1005.3.1|Name=mRNA_P-littoralis_Contig1005.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3159bp|location=Sequence derived from alignment at P-littoralis_Contig1005:11309..14723- (Pylaiella littoralis U1_48)back to top |