mRNA_P-littoralis_Contig1003.6.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: TBB5_ECTVR (Tubulin beta-5 chain n=44 Tax=Eukaryota TaxID=2759 RepID=TBB5_ECTVR) HSP 1 Score: 915 bits (2366), Expect = 0.000e+0 Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDAMG 1476 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDAMG Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDAMG 447
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: A0A7S2DBE6_9STRA (Tubulin beta chain n=6 Tax=Sar TaxID=2698737 RepID=A0A7S2DBE6_9STRA) HSP 1 Score: 873 bits (2256), Expect = 5.620e-316 Identity = 417/443 (94.13%), Postives = 436/443 (98.42%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELD 1464 MRE+VH+QAGQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTG+GMGTLLISK+REEYPDRVM+TYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK+SICDIPPKGLKMSTTFVGN+TA+QE WKRVAEQFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE+++ Sbjct: 9 MREVVHIQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKIREEYPDRVMTTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCGLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSSICDIPPKGLKMSTTFVGNSTAVQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEDVE 451
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: TBB_TETTH (Tubulin beta chain n=61 Tax=Alveolata TaxID=33630 RepID=TBB_TETTH) HSP 1 Score: 832 bits (2150), Expect = 3.320e-300 Identity = 397/440 (90.23%), Postives = 424/440 (96.36%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 1455 MREIVH+Q GQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CD LQGFQ+THS+GGGTG+GMGTLLISKVREEYPDR+M T+SV+PSPKVSDTVVEPYNATLSVHQLVENAD+C +DNEALYDICFRTLKLTTPTYGDLNHLVSAA+ G TC LRFPGQLN DLRKLAVN++PFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLT + +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+K+SICDIPPKGLKM+ TFVGN+TAIQE++KRVAEQFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEF+E+E Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEE 440
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: L1IEU9_GUITC (Tubulin beta chain n=18 Tax=Eukaryota TaxID=2759 RepID=L1IEU9_GUITC) HSP 1 Score: 832 bits (2148), Expect = 7.220e-300 Identity = 393/441 (89.12%), Postives = 425/441 (96.37%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE 1458 MREIVH+Q GQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRA+LMDLEPGTMDSVRAGP+GQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ++HS+GGGTGAGMGTLLISK+REEYPDR+M T+S++PSPKVSDTVVEPYNATLSVHQLVENAD+CF +DNEALYDICFRTLKLTTPT+GDLNHLVSA + G TCSLRFPGQLN DLRKLAVN+VPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLT A MFRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKM+ F+GN+TAIQE++KRV+EQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEF+E+EE Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQISHSLGGGTGAGMGTLLISKIREEYPDRIMLTFSIVPSPKVSDTVVEPYNATLSVHQLVENADECFCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVMSGVTCSLRFPGQLNSDLRKLAVNIVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVNFIGNSTAIQEMFKRVSEQFTGMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEEE 441
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: F0Y8A1_AURAN (Uncharacterized protein n=4 Tax=Sar TaxID=2698737 RepID=F0Y8A1_AURAN) HSP 1 Score: 840 bits (2171), Expect = 6.310e-299 Identity = 398/424 (93.87%), Postives = 418/424 (98.58%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 1407 MREIVH+Q GQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVEN+DQCFTLDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTC+ +FRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK++ICDIPPKGLKMSTTF+GN+TAIQE WKRVAEQFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENSDQCFTLDNEALYDICFRTLKLTTPTYGDLNHLIAAALCGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCSCLFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSAICDIPPKGLKMSTTFIGNSTAIQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: A0A813LVE5_POLGL (Tubulin beta chain n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LVE5_POLGL) HSP 1 Score: 830 bits (2143), Expect = 1.690e-296 Identity = 397/440 (90.23%), Postives = 420/440 (95.45%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 1455 MRE+VH+QAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CD LQGFQ+ HS+GGGTG+GMGTLLISKVREEYPDRVM T+SVIPSPKVSDTVVEPYNA LS HQLVEN+D+CF LDNEALYDICFRTLKLTTPTYGDLNHLVSAA+ G TC LRFPGQLNCDLRK+AVN+VPFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLT A +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKM+ F GN+TAIQE++KRVAE FT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE+E Sbjct: 162 MRELVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQMCHSLGGGTGSGMGTLLISKVREEYPDRVMETFSVIPSPKVSDTVVEPYNAVLSFHQLVENSDECFLLDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNCDLRKIAVNLVPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVAFAGNSTAIQEMFKRVAEYFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEE 601
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: A0A3P3XYL7_PLABS (Tubulin beta chain n=5 Tax=Eukaryota TaxID=2759 RepID=A0A3P3XYL7_PLABS) HSP 1 Score: 821 bits (2121), Expect = 9.250e-296 Identity = 391/430 (90.93%), Postives = 415/430 (96.51%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1425 MREIVH+QAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERIN YFNEATGGRYVPRAIL+DLEPGTMDSVRAGPFGQLFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLD VRKEAE CD LQGFQ+THS+GGGTG+GMGTLLISK+REEYPDR+M+T+SV PSPKVSDTVVEPYNATLSVHQLVEN+D+ F +DNEALYDICFRTLKLTTPTYGDLNHLVSAA+ G TC LRFPGQLN DLRKLAVN++PFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FDSKNMMCA DPRHGRYLTC+ MFRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+K+S+CDIPPKGLKMSTTF+GN+TAIQE++KRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILLDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDTVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRMMATFSVFPSPKVSDTVVEPYNATLSVHQLVENSDESFVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMCAVDPRHGRYLTCSAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSTTFIGNSTAIQEMFKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: TBB_EUPCR (Tubulin beta chain n=90 Tax=Sar TaxID=2698737 RepID=TBB_EUPCR) HSP 1 Score: 821 bits (2121), Expect = 9.600e-296 Identity = 391/446 (87.67%), Postives = 423/446 (94.84%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDAM 1473 MREIVHVQ GQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRA+LMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CD LQGFQ+THS+GGGTG+GMGTLLISK+REEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVENAD+ +DNEALYDICFRTLKLTTPTYGDLNHLVSA I G T LRFPGQLN DLRKLAVN++PFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCA+DPRHGRYLT + MFRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+K+S+CDIPPKGLK+++TF+GN+TAIQE++KRVAEQFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE+ EDE+ D M Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTSCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKLASTFIGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEYVEDEDEMDGM 446
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: A0A813IQL8_POLGL (Tubulin beta chain n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IQL8_POLGL) HSP 1 Score: 826 bits (2134), Expect = 2.530e-295 Identity = 395/437 (90.39%), Postives = 417/437 (95.42%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD 1446 MRE+VH+QAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CD LQGFQ+ HS+GGGTG+GMGTLLISKVREEYPDRVM T+SVIPSPKVSDTVVEPYNA LS HQLVEN+D+CF LDNEALYDICFRTLKLTTPTYGDLNHLVSAA+ G TC LRFPGQLNCDLRK+AVN+VPFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLT A +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKM+ F GN+TAIQE++KRVAE FT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD Sbjct: 1 MRELVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQMCHSLGGGTGSGMGTLLISKVREEYPDRVMETFSVIPSPKVSDTVVEPYNAVLSFHQLVENSDECFLLDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNCDLRKIAVNLVPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVAFAGNSTAIQEMFKRVAEYFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD 437
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Match: G9I115_9CHLO (Tubulin beta chain n=1 Tax=Ulva linza TaxID=63409 RepID=G9I115_9CHLO) HSP 1 Score: 819 bits (2115), Expect = 7.010e-295 Identity = 391/441 (88.66%), Postives = 421/441 (95.46%), Query Frame = 1 Query: 136 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE 1458 MREIVH+Q GQCGNQIG+KFWEV+ DEHGID TG+Y GDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQL HSMGGGTG+GMGTLLISK+REEYPDR+M T+SV+PSPKVSDTVVEPYNATLSVHQLVE+AD+C LDNEALYDICFRTLKLTTPT+GDLNHL+SA + G TCSLRFPGQLN DLRKLAVN+VPFPRLHFFMIGF PLTSRGSQQYRALTVPELTQQ +D+KNMMCAADPRHGRYLT A +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNNVKAS+CDIPPKGLKMS TFVGN+TA+QE++KRV+EQFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+AEEEGEFDE+EE Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVCDEHGIDSTGTYQGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLAHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVVPSPKVSDTVVEPYNATLSVHQLVESADECLILDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGVTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFMIGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTAAALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKASVCDIPPKGLKMSATFVGNSTAVQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASAEEEGEFDEEEE 441 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1003.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1003.6.1 >prot_P-littoralis_Contig1003.6.1 ID=prot_P-littoralis_Contig1003.6.1|Name=mRNA_P-littoralis_Contig1003.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=448bp MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYback to top mRNA from alignment at P-littoralis_Contig1003:8594..12203+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1003.6.1 ID=mRNA_P-littoralis_Contig1003.6.1|Name=mRNA_P-littoralis_Contig1003.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3610bp|location=Sequence derived from alignment at P-littoralis_Contig1003:8594..12203+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1003:8594..12203+ >mRNA_P-littoralis_Contig1003.6.1 ID=mRNA_P-littoralis_Contig1003.6.1|Name=mRNA_P-littoralis_Contig1003.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1344bp|location=Sequence derived from alignment at P-littoralis_Contig1003:8594..12203+ (Pylaiella littoralis U1_48)back to top |