Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 2880.D7FIC6 |
| Model size | 581 |
| Max annot lvl | 2880.D7FIC6|- |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Evalue | 0.000452 |
| EggNOG OGs | 2EJXG@1|root,2SPZB@2759|Eukaryota |
| Cds size | 579 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789343.8867376-CDS-P-littoralis_Contig1002:81610..82189 | 1680789343.8867376-CDS-P-littoralis_Contig1002:81610..82189 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1002 81611..82189 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1002.22.1 >prot_P-littoralis_Contig1002.22.1 ID=prot_P-littoralis_Contig1002.22.1|Name=mRNA_P-littoralis_Contig1002.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=193bp
RAGSPRAHVTTSSPPSSLGTSLQQRSPVSCGSVGVEIDVENETALTATGT
GGQARVLETEAGAGTDSSSDGSNGVDADGGGVFSDEALEALLTACEGNGS
KSPRSGRESGKSSVVDARSNLARSDVVDSSDDSSPTNVNGKGKGKARTES
VGGRRNPHQASAEKAKGKGYQLWALGFLQRACSYRDIPRMSQQ back to topmRNA from alignment at P-littoralis_Contig1002:81611..82190+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1002.22.1 ID=mRNA_P-littoralis_Contig1002.22.1|Name=mRNA_P-littoralis_Contig1002.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=580bp|location=Sequence derived from alignment at P-littoralis_Contig1002:81611..82190+ (Pylaiella littoralis U1_48)
AGAGCAGGGAGCCCGAGGGCACATGTTACCACATCCTCTCCGCCCTCAAG
CCTCGGAACTTCTTTGCAGCAGCGTTCACCGGTATCATGTGGGTCGGTAG
GGGTGGAAATAGATGTTGAGAACGAGACTGCTTTGACGGCCACGGGCACC
GGTGGTCAAGCTCGAGTGCTCGAGACGGAAGCTGGAGCAGGCACCGACAG
CAGCTCTGACGGCAGCAATGGGGTGGACGCTGACGGCGGAGGGGTGTTCT
CGGACGAGGCACTTGAGGCATTGCTGACAGCATGTGAGGGCAACGGTAGT
AAGTCGCCAAGATCGGGGCGCGAATCTGGCAAATCGAGTGTTGTTGACGC
CAGGTCGAATTTGGCGCGCTCCGATGTCGTCGACAGTAGCGACGACTCGT
CCCCAACGAACGTCAATGGCAAGGGAAAGGGGAAGGCGAGGACCGAAAGT
GTCGGCGGAAGGAGGAACCCCCACCAGGCAAGTGCCGAAAAGGCAAAAGG
GAAGGGATACCAGTTGTGGGCCCTCGGCTTCTTGCAGCGAGCCTGCTCGT
ATCGTGACATCCCGAGAATGTCACAACAAA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1002:81611..82190+ >mRNA_P-littoralis_Contig1002.22.1 ID=mRNA_P-littoralis_Contig1002.22.1|Name=mRNA_P-littoralis_Contig1002.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=579bp|location=Sequence derived from alignment at P-littoralis_Contig1002:81611..82190+ (Pylaiella littoralis U1_48)
AGAGCAGGGAGCCCGAGGGCACATGTTACCACATCCTCTCCGCCCTCAAG
CCTCGGAACTTCTTTGCAGCAGCGTTCACCGGTATCATGTGGGTCGGTAG
GGGTGGAAATAGATGTTGAGAACGAGACTGCTTTGACGGCCACGGGCACC
GGTGGTCAAGCTCGAGTGCTCGAGACGGAAGCTGGAGCAGGCACCGACAG
CAGCTCTGACGGCAGCAATGGGGTGGACGCTGACGGCGGAGGGGTGTTCT
CGGACGAGGCACTTGAGGCATTGCTGACAGCATGTGAGGGCAACGGTAGT
AAGTCGCCAAGATCGGGGCGCGAATCTGGCAAATCGAGTGTTGTTGACGC
CAGGTCGAATTTGGCGCGCTCCGATGTCGTCGACAGTAGCGACGACTCGT
CCCCAACGAACGTCAATGGCAAGGGAAAGGGGAAGGCGAGGACCGAAAGT
GTCGGCGGAAGGAGGAACCCCCACCAGGCAAGTGCCGAAAAGGCAAAAGG
GAAGGGATACCAGTTGTGGGCCCTCGGCTTCTTGCAGCGAGCCTGCTCGT
ATCGTGACATCCCGAGAATGTCACAACAA back to top
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