mRNA_P-littoralis_Contig100.84.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig100.84.1
Unique NamemRNA_P-littoralis_Contig100.84.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 3.830e-79
Identity = 165/390 (42.31%), Postives = 219/390 (56.15%), Query Frame = 3 
Query:    9 AGFQSQRQTSANNGGVPSLIGGVCRHGAAALLHIKKKTVKHATKVRIAGEQTFD--GVKMLAEKAKAAGLVTQPEFDDVMAVIVGADRNGVWPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCR----SAKGEGCSEFKEK------------------------KRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSELPPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKVVTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVELSFMYNCLEQFIGGSPIQTYLFGFFSPLQTNLAWLSTDEFVA 1088
            AGF SQ++T  ++GGV S +GG+C+H A AL H+  KT+K AT V + G  + D    K L   AK    +T  E +DVM+++ GA+R+GVWP+ E ER  + + D R RTTE DWG VK D+VS G A RR++  RH MC+    S     CS+  +                          R    HTL+VA+F+ + G  S  + +G    A+DAS    SGG  LPRTPQ+      + Y  K+ DML Y+ R   PP  PS L  ++    RR  VSQ KCTCGG L    D  A +V        +EVERRKCG+CG  AWASD+WRKT VFNY+  +LV+LS +Y CL QFI G+ IQ++ F    PL TN+ WLS +  +A
Sbjct:   96 AGFVSQQRTVGSHGGVASAVGGLCQHAALALEHMAAKTMKRATSV-LGGVASTDYAAAKELVTAAKLGSHLTAEECNDVMSIVEGAERSGVWPVVEVERHQYMVLDMRSRTTELDWGSVKFDQVSEGEASRRMSSSRHFMCKVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLXAHTLVVAVFSRI-GLDSMASSTGEGGAAEDAS----SGGSALPRTPQVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLMVSQTKCTCGGELLPEADVIATLV--------MEVERRKCGACGACAWASDNWRKTSVFNYNKYFLVDLSLLYKCLGQFIRGTTIQSFFFSHLEPLTTNIGWLSENPDLA 471
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: D7G2H3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H3_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 8.540e-56
Identity = 111/240 (46.25%), Postives = 145/240 (60.42%), Query Frame = 3 
Query:  120 TVKHATKVRIAGEQTFD--GVKMLAEKAKAAGLVTQPEFDDVMAVIVGADRNGVWPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSELPPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKVVT 833
            T+K AT V + G  + D    K L   AK    +T  E +DVM+++ GA+R+GVWP+ ETER  + + D R RTTE DWG VK D+VS G A RR+T  RH MC++ KGE C+E K KKR+RC HTL+VA+F+ + G  ST + +G       A+  ASSGG  LPRTPQ+      + Y  K+ DML Y+ R   PP  PS L  ++    RR  VSQ KCTCGG L    D +A +VT
Sbjct:    5 TMKRATSV-LGGVSSRDYAAAKELVTAAKLGSHLTAEECNDVMSIVEGAERSGVWPVVETERHQYMVLDMRSRTTELDWGSVKFDQVSEGEASRRMTSSRHFMCKAVKGEACTENKNKKRARCAHTLVVAVFSRI-GLDSTASSTGE----GGAAAGASSGGSALPRTPQVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLVVSQTKCTCGGELLPEADVNATLVT 238
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: A0A6H5JLK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK4_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.860e-51
Identity = 112/273 (41.03%), Postives = 145/273 (53.11%), Query Frame = 3 
Query:  240 MAVIVGADRNGVWPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSELPPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKVVTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVELSFMYNCLEQFIGGSPIQTYLFGFFSPLQTNL 1058
            M+++ GA+R+GVWP+  TER  + + D R RTTE D G +K D+VS G A RR+T  RH MC+     G          RC       +F   +G      R G        S     G   LPRTP++      + +  K+ DML Y+ R   PP  PS L  ++    RR  VSQ KCTCGG L    D +A +VT        EVERRKCG+CG  AWASD+ RKT VFN  N +LV+LS +Y C  QFI G+ IQ++ F    PL TN+
Sbjct:    1 MSIMEGAERSGVWPVVVTERHQYMVLDMRSRTTELDQGSIKFDQVSEGEASRRVTSSRHFMCKVRAHLG----------RC------CLFPHWVGFDGVEHRRGW------GSSGCFFGWLSLPRTPRVFLDSDAESFCSKLADMLTYMRRLALPPTAPSGLARISVTPARRLVVSQTKCTCGGELLPEADVNATLVT--------EVERRKCGTCGACAWASDNLRKTSVFNLKNYFLVKLSLLYKCFGQFIRGTTIQSFFFSHVEPLTTNV 243
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: A0A6H5JPP3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP3_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 4.650e-38
Identity = 117/377 (31.03%), Postives = 183/377 (48.54%), Query Frame = 3 
Query:   18 QSQRQTSANNGGVPSLIGGVCRHGAAALLHIKKKTVKHATKVRIAGEQ--TFDGVKMLAEKAKAAGLVTQPEFDDVMAVIVGADRNGVWPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCT-CGGTLDALEDEDAKV---VTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVELSFMYNCLEQFIGGSPIQTYLFGFFSPLQTNLAWLSTDEFVAKRYGRGCAVL 1118
            +S  +T+  N GV S  GG+C H AA+L  + K TV +AT +   G       G+     +A+A   +++ E   ++ ++  A   GV+P+ +  +  +A+ + R                    A R++T  R LMC++ +G  CSEF EKK  +C+HTL+VA+    L +   +   G   +  D  G     G   PRT Q +  +    YR  + + L  +S  KFP   P  L        A A   +  SQ+ C+ CG    A E + + V   +T  P +  V V   +C +CG   +A+D+WR+TG+FNY+N YLVELS +Y CLE F  G+ I      F  PL ++L W+  +  ++KR   G  +L
Sbjct:    6 RSVSRTAGANAGVQSATGGICEHAAASLEALDKNTVVNATPIFFNGINGCPHAGLTACISQARAKAFLSEVEETLLLGMVAEAKDVGVYPVVQLSKWGYAVSERRSDGKXXXXXXX---------ASRKITAARGLMCKANRGGPCSEF-EKKNRKCLHTLVVAL---ALWQEEGMRDEGLGVEQVDVDGGRIPDG--TPRTAQKMLDKDAPAYRKCLANCLNTMSVIKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFPA-ESQHSVVPTRLTEGPGMSKVNVHTNECETCGIHGFANDNWRETGLFNYNNSYLVELSILYRCLEAFTRGTTICAVFETFLEPLASDLVWIKANPDLSKRLANGTNLL 366
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: A0A6H5JWX4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX4_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 2.130e-37
Identity = 115/378 (30.42%), Postives = 180/378 (47.62%), Query Frame = 3 
Query:   18 QSQRQTSANNGGVPSLIGGVCRHGAAALLHIKKKTVKHATKVRIAGEQ--TFDGVKMLAEKAKAAGLVTQPEFDDVMAVIVGADRNGVWPLYETERRHFAIYDNRK--RTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKV---VTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVELSFMYNCLEQFIGGSPIQTYLFGFFSPLQTNLAWLSTDEFVAKRYGRGCAVL 1118
            +S  QT+  N GV S  G +C H AA+L  + K TV  AT +   G     + G+     +A+A   +++ E   ++ ++  A   GV+P+ +     +A+ + R+  +        V+ D   PG           LMC++ +G  CSE+ EKK  +C+HTL+VA+    L +   +   G      D  G     G   PRT Q +  +    YR  + + L  +S +KFP   P  L        A A   +  SQ+ C+  G     E++   V   +T  P +  V V   +C +CG    ASD+WR+TG+FNY+N YLVELS +Y CLE F  G+ I  +   F  PL ++L W+  +  ++KR   G  +L
Sbjct:    6 RSVSQTAGANAGVQSATGAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKAFLSEVEETLLVGMVAEAKDIGVYPVVQLGEWGYAVSERRRWRQGXXXXXXRVEEDHCCPG-----------LMCKANRGGPCSEY-EKKDRKCLHTLVVAL---ALWQEEGMRDEGLGVGQVDMDGGRIPDG--TPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFHTENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSKRLANGTNLL 366
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: D8LSV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV9_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 3.200e-32
Identity = 66/141 (46.81%), Postives = 94/141 (66.67%), Query Frame = 3 
Query:    6 RAGFQSQRQTSANNGGVPSLIGGVCRHGAAALLHIKKKTVKHATKVRIAGEQTFDGVKMLAEKAKAAGLVTQPEFDDVMAVIVGADRNGVWPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCR 428
            RAG  +Q+QT+ ++GGV S IGG+C+H  AAL H++KKTVK A +V+  G   +D  K     AK+ G ++  E   +M ++  A+ +GVWP+YETE  HF + D+R RT+E D+ CVK D V PG + RRLTP ++ MCR
Sbjct:  146 RAGLVAQQQTAGSHGGVASAIGGLCKHAKAALEHMRKKTVKDAREVKGDGWD-WDAAKEHVATAKSDGHLSVVEHTAIMTMVERAEGSGVWPVYETEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 285
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: D7FR12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR12_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 3.650e-32
Identity = 66/141 (46.81%), Postives = 94/141 (66.67%), Query Frame = 3 
Query:    6 RAGFQSQRQTSANNGGVPSLIGGVCRHGAAALLHIKKKTVKHATKVRIAGEQTFDGVKMLAEKAKAAGLVTQPEFDDVMAVIVGADRNGVWPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCR 428
            RAG  +Q+QT+ ++GGV S IGG+C+H  AAL H++KKTVK A +V+  G   +D  K     AK+ G ++  E   +M ++  A+ +GVWP+YETE  HF + D+R RT+E D+ CVK D V PG + RRLTP ++ MCR
Sbjct:  110 RAGLVAQQQTAGSHGGVASAIGGLCKHAKAALEHMRKKTVKDAREVKGDGWD-WDAAKEHVATAKSDGHLSVVEHTVIMTMVERAEGSGVWPVYETEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 249
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: A0A6H5L0Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y4_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.910e-24
Identity = 77/227 (33.92%), Postives = 113/227 (49.78%), Query Frame = 3 
Query:  435 KGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKV---VTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVELSFMYNCLEQFIGGSPIQTYLFGFFSPLQTNLAWLSTDEFVAKR 1094
            +G  CSE+ EKK  +C+HTL+VA+    L     +   G      D  G  +  G   PRT Q +  +    YR  + + L  +S +KFP   P  L        A A   +  SQ+ C+  G     E++   V   +T  P +  V V   +C +CG    ASD+WR+TG+FNY+N YLVELS +Y CLE F  G+ I  +   F  PL ++L W+  +  ++KR
Sbjct:   13 RGGPCSEY-EKKNRKCLHTLVVAL---ALWHEEGMRDEGLGVGQVDVDGDRTPDG--TPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFPTENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTIGAFFETFLEPLGSDLVWIKANPDLSKR 233
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: A0A6H5K6Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y4_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 6.460e-24
Identity = 87/284 (30.63%), Postives = 130/284 (45.77%), Query Frame = 3 
Query:  270 GVWPLYETERRHFAIYDNRKRTTEQDWGC--VKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCT-CGGTLDALEDED--AKVVTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVELSFMYNCLEQFIGGSPIQTYLFGFFSPLQTNLAWLSTDEFVAKR 1094
            GV+P+ +     +A+ + R+           V+ D   PG           LMC+  +G  CSE+ EKK  +C+HTL+VA+    L +   +   G      D  G     G   PRT Q +  +    YR  + + L  +S +KFP   P  L        A     +  SQ+ C+ CG            A  +T  P +  V V   +C +CG    ASD+WR+TG+FNY+N YLVELS +Y CLE F  G+ I  +   F  PL ++L W+  +  ++ R
Sbjct:    9 GVYPVVQLGEWGYAVSERRRXXXXXXXXXXRVEEDHCYPG-----------LMCKVNRGGPCSEY-EKKNRKCLHTLVVAL---ALWQEEGMRDEGLGVGQVDVDGGRIPDG--TPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANTSITYTTSQKTCSGCGRDFPTGNQYIVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSILYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSTR 275
[Close]
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Match: A0A6H5JGH9_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH9_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.590e-19
Identity = 82/266 (30.83%), Postives = 119/266 (44.74%), Query Frame = 3 
Query:  342 QDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSELPP----VTAEAGRRFKVSQRKCT-CGGTLDALEDED--AKVVTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVELSFMYNCLEQFIGGSPIQTYLFGFFSPLQTNLAWLSTDEFVAKRYGRGCAVL 1118
            Q  G ++ D   PG           L  ++ +   CSEF EKK  +C+HTL+V +    L +   +   G      D  G     G   PRT Q +  +     R  + + L  +S +KFP   P  L        A A      SQ  C+ CG    A       A  +T  P +  V V   +C +CG    AS++WR+TG+FNY+N YLVELS +Y CLE F  G+ I  +   F  PL ++L W+  +  ++ R   G  +L
Sbjct:   47 QGQGRIEEDHCCPG-----------LDVQANQRGPCSEF-EKKDRKCLHTLVVTL---ALWQEEGMRDEGLGVGQVDVDGGRIPDG--TPRTAQKMLDKDAPACRKGLANCLNTMSVYKFPENLPFGLGRHGAITNANASITCTTSQNTCSGCGRDFPAENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASENWRETGLFNYNNSYLVELSILYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSNRLANGTNLL 295
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig100.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KPP3_9PHAE3.830e-7942.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2H3_ECTSI8.540e-5646.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLK4_9PHAE2.860e-5141.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPP3_9PHAE4.650e-3831.03Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWX4_9PHAE2.130e-3730.42CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LSV9_ECTSI3.200e-3246.81Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FR12_ECTSI3.650e-3246.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0Y4_9PHAE3.910e-2433.92CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K6Y4_9PHAE6.460e-2430.63CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JGH9_9PHAE1.590e-1930.83CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig100contigP-littoralis_Contig100:318499..321028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FR86
Preferred nameATG5
PFAMsAPG5
Model size1545
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01880,ko:K08339
KEGG ReactionR03654
KEGG Pathwayko00970,ko04136,ko04137,ko04138,ko04140,ko04211,ko04213,ko04216,ko04621,ko04622,ko05131,map00970,map04136,map04137,map04138,map04140,map04211,map04213,map04216,map04621,map04622,map05131
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0000272,GO:0000407,GO:0000422,GO:0000423,GO:0001101,GO:0001775,GO:0001817,GO:0001974,GO:0002165,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002697,GO:0002700,GO:0002718,GO:0002739,GO:0002791,GO:0003008,GO:0003013,GO:0003015,GO:0003018,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005776,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006464,GO:0006497,GO:0006501,GO:0006807,GO:0006914,GO:0006950,GO:0006952,GO:0006995,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0007275,GO:0007423,GO:0007507,GO:0007552,GO:0007568,GO:0008015,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009251,GO:0009267,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009653,GO:0009791,GO:0009886,GO:0009888,GO:0009892,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010039,GO:0010040,GO:0010150,GO:0010522,GO:0010605,GO:0010623,GO:0010639,GO:0010941,GO:0010959,GO:0012501,GO:0012506,GO:0014706,GO:0015980,GO:0016020,GO:0016032,GO:0016043,GO:0016052,GO:0016236,GO:0016237,GO:0018410,GO:0019058,GO:0019079,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019883,GO:0022411,GO:0022607,GO:0030097,GO:0030098,GO:0030100,GO:0030139,GO:0030154,GO:0030217,GO:0030234,GO:0030424,GO:0030435,GO:0030587,GO:0030659,GO:0030666,GO:0030670,GO:0031056,GO:0031057,GO:0031090,GO:0031288,GO:0031323,GO:0031324,GO:0031344,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032258,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033077,GO:0033365,GO:0033554,GO:0034045,GO:0034274,GO:0034613,GO:0034645,GO:0034727,GO:0034762,GO:0034765,GO:0035051,GO:0035065,GO:0035067,GO:0035069,GO:0035096,GO:0035150,GO:0035296,GO:0035973,GO:0036211,GO:0039689,GO:0039694,GO:0042110,GO:0042157,GO:0042158,GO:0042221,GO:0042311,GO:0042493,GO:0042592,GO:0042594,GO:0042692,GO:0042742,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043269,GO:0043383,GO:0043412,GO:0043562,GO:0043583,GO:0043687,GO:0043934,GO:0044042,GO:0044085,GO:0044087,GO:0044093,GO:0044232,GO:0044233,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044275,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044804,GO:0044805,GO:0045058,GO:0045060,GO:0045061,GO:0045321,GO:0045335,GO:0045806,GO:0046649,GO:0048366,GO:0048367,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048646,GO:0048707,GO:0048731,GO:0048738,GO:0048771,GO:0048827,GO:0048839,GO:0048840,GO:0048856,GO:0048869,GO:0050707,GO:0050708,GO:0050764,GO:0050765,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050832,GO:0050878,GO:0050880,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051279,GO:0051282,GO:0051409,GO:0051641,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051924,GO:0055001,GO:0055002,GO:0055006,GO:0055007,GO:0055012,GO:0055013,GO:0055015,GO:0055114,GO:0060033,GO:0060047,GO:0060255,GO:0060341,GO:0060491,GO:0060537,GO:0060548,GO:0060627,GO:0061061,GO:0061709,GO:0061723,GO:0061726,GO:0061739,GO:0061912,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070255,GO:0070257,GO:0070727,GO:0070925,GO:0071496,GO:0071500,GO:0071704,GO:0071840,GO:0072359,GO:0072665,GO:0075044,GO:0075071,GO:0080090,GO:0090066,GO:0090087,GO:0090239,GO:0090241,GO:0090693,GO:0090702,GO:0097014,GO:0097458,GO:0097708,GO:0097746,GO:0097755,GO:0098542,GO:0098588,GO:0098772,GO:0098805,GO:0099120,GO:0099402,GO:0099568,GO:0120025,GO:0120032,GO:0120035,GO:0120038,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901983,GO:1901984,GO:1902017,GO:1902115,GO:1902275,GO:1902494,GO:1902617,GO:1903008,GO:1903169,GO:1903320,GO:1903321,GO:1903530,GO:1904062,GO:1905037,GO:1905268,GO:1990234,GO:2000377,GO:2000378,GO:2000618,GO:2000619,GO:2000756,GO:2000757,GO:2001251
Exons3
Evalue1.91e-20
EggNOG OGsKOG2976@1|root,KOG2976@2759|Eukaryota
EC6.1.1.14
Descriptionprocess utilizing autophagic mechanism
Cds size963
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789340.8569283-UTR-P-littoralis_Contig100:318498..3186771680789340.8569283-UTR-P-littoralis_Contig100:318498..318677Pylaiella littoralis U1_48UTRP-littoralis_Contig100 318499..318677 +
1680789340.8999882-UTR-P-littoralis_Contig100:320625..3210281680789340.8999882-UTR-P-littoralis_Contig100:320625..321028Pylaiella littoralis U1_48UTRP-littoralis_Contig100 320626..321028 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789340.8677776-CDS-P-littoralis_Contig100:318677..3189261680789340.8677776-CDS-P-littoralis_Contig100:318677..318926Pylaiella littoralis U1_48CDSP-littoralis_Contig100 318678..318926 +
1680789340.8768284-CDS-P-littoralis_Contig100:319349..3197571680789340.8768284-CDS-P-littoralis_Contig100:319349..319757Pylaiella littoralis U1_48CDSP-littoralis_Contig100 319350..319757 +
1680789340.8870378-CDS-P-littoralis_Contig100:320319..3206251680789340.8870378-CDS-P-littoralis_Contig100:320319..320625Pylaiella littoralis U1_48CDSP-littoralis_Contig100 320320..320625 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig100.84.1prot_P-littoralis_Contig100.84.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig100 318678..320625 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig100.84.1

>prot_P-littoralis_Contig100.84.1 ID=prot_P-littoralis_Contig100.84.1|Name=mRNA_P-littoralis_Contig100.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=321bp
MLAEKAKAAGLVTQPEFDDVMAVIVGADRNGVWPLYETERRHFAIYDNRK
RTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSR
CVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLL
AKRSPDDYRLKVDDMLFYISRHKFPPIRPSELPPVTAEAGRRFKVSQRKC
TCGGTLDALEDEDAKVVTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTG
VFNYDNKYLVELSFMYNCLEQFIGGSPIQTYLFGFFSPLQTNLAWLSTDE
FVAKRYGRGCAVLVFHAIPA*
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mRNA from alignment at P-littoralis_Contig100:318499..321028+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig100.84.1 ID=mRNA_P-littoralis_Contig100.84.1|Name=mRNA_P-littoralis_Contig100.84.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2530bp|location=Sequence derived from alignment at P-littoralis_Contig100:318499..321028+ (Pylaiella littoralis U1_48)
GGCAGAGGGCGGGATTCCAATCTCAGCGACAGACGTCGGCGAACAACGGT
GGGGTGCCCAGCTTGATCGGAGGCGTGTGTCGACACGGCGCTGCCGCGTT
ACTCCACATCAAGAAGAAAACAGTGAAACACGCCACCAAGGTGAGGATTG
CGGGAGAGCAAACCTTTGACGGAGTTAAGATGCTGGCGGAAAAAGCGAAG
GCGGCTGGTCTAGTGACTCAACCGGAGTTCGATGATGTGATGGCAGTCAT
TGTGGGGGCAGACAGGAATGGCGTGTGGCCGCTGTACGAGACGGAACGTC
GTCATTTCGCCATCTACGACAACCGGAAACGAACGACCGAGCAGGACTGG
GGATGTGTGAAGAATGACGAAGTCTCACCCGGGAGTGCGCCCCGAAGATT
GACTCCTGAGCGGCACCTCATGTGCAGGGTAAGGCTACGCAGAGATTACG
CAGAGATGAAGAGCAAAGTTTGTGATGGGAATTGCCATTGACGTCGTATG
TGAGCCTTTTTTTATTCACAGTACTACCGATTGGCAAGGAGGTTGTAGAT
GCGTAGATGCATGTGCGACATGTGGGGCCTTTTGAATATGTGTATTCGTA
AAGAGGGAACTCCATAGACATATGAAACAGGGCGATACATCGGGGGCATG
ACTATCGCAGTCATTGAGACCCTCCTATCAAACCCCAGGTCAAATCCAGG
TCATGCCTCCGTCCCTGCCTTTTGGTCGAAGTGGTAACTGGCGCATTCCT
GTCGCTGCTCTTTTAGCCAAAACTTTTGGTGCTTGTGCTATGCTAGTTTG
ACTTGTTGCTCATCCATCATGCTACATACTCCTTCGCGCGCACGCCCTCA
GTCCGCGAAGGGAGAGGGCTGCTCCGAATTCAAGGAAAAGAAGCGCTCAA
GATGCGTGCACACGTTGATCGTCGCAATCTTCACGGGCGTCTTGGGGCGG
GGTTCGACCGTTGCGAGGAGCGGGACGACGGCTGATGCAGATGATGCTTC
TGGAAGTGCCTCGTCGGGTGGACCTGTGTTGCCCCGTACTCCGCAGTTGC
TCGCCAAGCGTTCCCCCGATGATTATCGTTTGAAGGTGGATGATATGCTC
TTCTACATTTCGCGTCACAAGTTTCCACCCATCCGCCCCTCGGAGCTGCC
GCCAGTGACGGCAGAAGCGGGTAGAAGGTTCAAAGTATCCCAACGCAAGT
GCACCTGTGGGGGCACTCTGGATGCTCTCGAGGACGAGGATGCAAAGGTC
GTCACTGGGGTGAGTGGTGAAAGTATTGTGGGCAGCGCAGAACAAGCGTA
ATTCCGTGAGTCTGTGAGAATAGAGAGTAGGACGCGGCATGGCGATAACC
GGGTATCCCTTGCAGCCTCTCCAGGGACGTGAACAGCCTGTTGCGACAAT
TCTTTAGGAGTCCTGGCAGTCTGCCTGTGAGGTTCTCACGTGTAAATATC
TTGGTTTGCTCACAGCTGCCAATTTTTCGTCTGGTTCTCCGAGAAAAACC
ACTGGTTCCAATTTCGAACCCGTGCCGTCCGCGCAGAAAAGCACAAAATG
GCCTGGCCCCAGAAGGGTTCACCCGCTGGCCCCGACGTTCGTAACCATGG
GGACGGTGATGACGCTCCCCCCCCAATATAATGCAAAACACATTTGGATG
CGTTTGTAATGTCGCACCTCGCTATTGTCTATGAACCCATGGAGGACTGA
ATACCGAGAAGGGGCATCCTCTTCCCATAGTCGTGCATGGGATTCTAAAG
ACTTATCCTGGCGTGGTCTTAACACACTTGTCGCCCCTCTCTAACCACCG
ACCTCACTCTATTTCTTATAGGCACCGAATATCGTGACAGTGGAAGTGGA
GCGTCGGAAGTGTGGGTCATGTGGGAGGCCCGCGTGGGCAAGTGACGACT
GGCGAAAGACGGGGGTGTTCAACTACGACAACAAGTACCTCGTGGAGCTA
TCCTTCATGTACAACTGTCTCGAGCAGTTCATCGGAGGGAGTCCGATTCA
GACGTACCTATTCGGCTTTTTTTCGCCTCTTCAGACGAACCTCGCTTGGC
TTTCAACGGACGAGTTTGTCGCCAAGAGGTATGGGCGTGGGTGTGCCGTT
CTGGTTTTTCATGCAATCCCTGCGTGAACTAGGCGAGTCGAAGAAAGCAA
AAGAAGGATGTGCATAGGTGGGGCCCCACGAACGAAACCTACAGGGGACA
TGATTGCAACAAGTACGATCGGTGTTGGAAAAACTAGCGAGAACATTTCA
TAGTAACATCTTGTTTTGGGCTGCGCCTTTTTGCGAGGATATACACGTCG
GACATCAGTGGAGATGTTCGTCGTGATACTGAACGGTAACGAGCACGTGT
ATGGCACACACATGGTGGTACCACTCCTAACGAAGCAACGCCGTGGTGTA
TCGGCATGTCGCCACGAGTACTGTCTGATGCATCGCAAAGAGGGCAGCAC
TCGGACGGCCTGGAACATACCACCGCGGGTCGCCAACGTTTAGGTTGTCG
TCATTCTCGACGTTTGGAGCGAGGATTCAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig100:318499..321028+

>mRNA_P-littoralis_Contig100.84.1 ID=mRNA_P-littoralis_Contig100.84.1|Name=mRNA_P-littoralis_Contig100.84.1|organism=Pylaiella littoralis U1_48|type=CDS|length=963bp|location=Sequence derived from alignment at P-littoralis_Contig100:318499..321028+ (Pylaiella littoralis U1_48)
ATGCTGGCGGAAAAAGCGAAGGCGGCTGGTCTAGTGACTCAACCGGAGTT
CGATGATGTGATGGCAGTCATTGTGGGGGCAGACAGGAATGGCGTGTGGC
CGCTGTACGAGACGGAACGTCGTCATTTCGCCATCTACGACAACCGGAAA
CGAACGACCGAGCAGGACTGGGGATGTGTGAAGAATGACGAAGTCTCACC
CGGGAGTGCGCCCCGAAGATTGACTCCTGAGCGGCACCTCATGTGCAGGT
CCGCGAAGGGAGAGGGCTGCTCCGAATTCAAGGAAAAGAAGCGCTCAAGA
TGCGTGCACACGTTGATCGTCGCAATCTTCACGGGCGTCTTGGGGCGGGG
TTCGACCGTTGCGAGGAGCGGGACGACGGCTGATGCAGATGATGCTTCTG
GAAGTGCCTCGTCGGGTGGACCTGTGTTGCCCCGTACTCCGCAGTTGCTC
GCCAAGCGTTCCCCCGATGATTATCGTTTGAAGGTGGATGATATGCTCTT
CTACATTTCGCGTCACAAGTTTCCACCCATCCGCCCCTCGGAGCTGCCGC
CAGTGACGGCAGAAGCGGGTAGAAGGTTCAAAGTATCCCAACGCAAGTGC
ACCTGTGGGGGCACTCTGGATGCTCTCGAGGACGAGGATGCAAAGGTCGT
CACTGGGGCACCGAATATCGTGACAGTGGAAGTGGAGCGTCGGAAGTGTG
GGTCATGTGGGAGGCCCGCGTGGGCAAGTGACGACTGGCGAAAGACGGGG
GTGTTCAACTACGACAACAAGTACCTCGTGGAGCTATCCTTCATGTACAA
CTGTCTCGAGCAGTTCATCGGAGGGAGTCCGATTCAGACGTACCTATTCG
GCTTTTTTTCGCCTCTTCAGACGAACCTCGCTTGGCTTTCAACGGACGAG
TTTGTCGCCAAGAGGTATGGGCGTGGGTGTGCCGTTCTGGTTTTTCATGC
AATCCCTGCGTGA
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