mRNA_P-littoralis_Contig10.66.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 330 bits (847), Expect = 3.680e-99 Identity = 188/293 (64.16%), Postives = 219/293 (74.74%), Query Frame = 3
Query: 99 TRSINVKFQGASRDVVLPNSVTLAGLQAAIASTFKVDLPARSGADDEPKHSDLSFTYKDPEGDDIVFDKDSELKLALRLSPSSLKISAACK-TKPTDKPDPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALLARADAETKN-----KLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTSA-AKKDVLHEAFVAGGIQLRPREVQPLLVALGVRPGRLVRFGYVDGRCLRAMLEAEKR-ANKRNGH 953
T SI + FQG SRDV +P VTLA LQAAIA F +LP RS A + K +DLSFTYKDP+GDDIVFDKDSEL LA+RL P SL+ISAA K KP +KPDPE LY+IAARNLREY+GVPSMTP KL KTL FL+L P+RLVKQGLAP LLAR AE N K+PLGD NNEDL ESVA +E+M+V EDDKKEWNDGFVSVE A T + + KK+++H+AF+AGGIQLRPREV+PLLVAL VRP RL + G V+G+ LRAML+AEK+ A+KR GH
Sbjct: 3 TSSIKINFQGTSRDVNVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSV-EDDKKEWNDGFVSVEPADTSSPGNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAHKRRGH 294
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 325 bits (833), Expect = 5.680e-97 Identity = 189/303 (62.38%), Postives = 219/303 (72.28%), Query Frame = 3
Query: 99 TRSINVKFQGASRDVVLPNSVTLAGLQAAIASTFKVDLPARSGADDEPKHSDLSFTYKDPEGDDIVFDKDSELKLALRLSPSSLKISAACK-TKPTDKPDPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALLARADAETKN-----KLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTS-----------AAKKDVLHEAFVAGGIQLRPREVQPLLVALGVRPGRLVRFGYVDGRCLRAMLEAEKRA-NKRNGH 953
T SI + FQGASRDV +P V+LA LQAAIA+ F +LP RS A + K +DLSFTYKDP+GDDIVFDKDSELKLA+RL PSSL+ISA K ++P KPDPE LY+IAARNLREY+GVPSMT KL KTL FLKL P+RLVKQGLAP LLAR AE N K+PLGD NNEDL ESVA +E+M+V EDDKKEWNDGFVS ES A+ AA + KKD++H+AF+ GGIQLRPREV+PLLVAL VRP RL + G VDG+ LRAML AEK+A +KR H
Sbjct: 21 TPSIKINFQGASRDVNVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSV-EDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAHKRCDH 322
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 321 bits (823), Expect = 1.600e-96 Identity = 190/312 (60.90%), Postives = 222/312 (71.15%), Query Frame = 3
Query: 99 TRSINVKFQGASRDVVLPNSVTLAGLQAAIASTFKVDLPARSGADDEPKHSDLSFTYKDPEGDDIVFDKDSELKLALRLSPSSLKISAACKTKPT-DKPDPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALLARADAETKN-----KLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTSA-AKKDVLHEAFVAGGIQLRPREVQPLLVALGVRPGRLVRFGYVDGRCLRAMLEAEKR-ANKRNGHQCMARGGGAGAPGAGGNRG 1010
T SI + FQGASRDV +P VTLA LQA IA+ F +LP RS + K +DLSFTYKDP+GDDIVFDKDSELKLA+RL P SL+ISAA K K + PD E LY+IAARNLREY+GVPSMTP KL KTL FLKL P+RLVKQGLAP LL R AE N K+PLGD NNEDL ESVA +E+M++ EDDKKEWNDGFVSVE A T + + KK+++H+AF+AGGIQLRPREV+PLLVAL VRP RL + G VDG+ LRAML+AEK+ A+KR+G PG GG RG
Sbjct: 19 TSSIKINFQGASRDVNVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSL-EDDKKEWNDGFVSVEPADTSSPDNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKRHG------------PGHGGPRG 317
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 320 bits (819), Expect = 6.860e-96 Identity = 192/312 (61.54%), Postives = 223/312 (71.47%), Query Frame = 3
Query: 99 TRSINVKFQGASRDVVLPNSVTLAGLQAAIASTFKVDLPARSGADDEPKHSDLSFTYKDPEGDDIVFDKDSELKLALRLSPSSLKISAACK-TKPTDKPDPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALLARADAETKN-----KLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTSA-AKKDVLHEAFVAGGIQLRPREVQPLLVALGVRPGRLVRFGYVDGRCLRAMLEAEKRA-NKRNGHQCMARGGGAGAPGAGGNRG 1010
T SI + FQGASRDV +P TLA LQAAIA+ F+V+LP RS + K +DLSFTYKDP+GDDIVFDKDSEL LALRL P SL+ISAA K K T PD E LY+IAARNLREY+GVPSMTP KL KTL FLKL P+RLVKQGLAP LLAR AET N K+ LGD NNEDL E VA +E M+V EDDKKEWNDGFVSVE A T ++ + K++++H+AF+AGGIQLRPREV+PLLVAL VRP RL + G VDG+ LRAML+AEK+A +KR+G PG GG RG
Sbjct: 30 TSSIKINFQGASRDVSVPAPATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSV-EDDKKEWNDGFVSVEPAETSSSDNGNEEENDDAAPEVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKRHG------------PGHGGPRG 328
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 315 bits (807), Expect = 3.940e-94 Identity = 193/326 (59.20%), Postives = 224/326 (68.71%), Query Frame = 3
Query: 99 TRSINVKFQGASRDVVLPNSVTLAGLQAAIASTFKVDLPARSGADDEPKHSDLSFTYKDPEGDDIVFDKDSELKLALRLSPSSLKISAACK-TKPTDKPDPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALLARADAETKN-----KLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTSAAKKDVLHEAFVAGGIQLRPREVQPLLVALGVRPGRLVRFGYVDGRCLRAMLEAEKR-ANKRNG--HQCMARGGGAGAPGAGGNRGPRGGLTMMVRHLL 1049
T SI + FQGASRDV + V LA LQAAIA+ F V+LPARS A + +DLSFTYKDP+GDDIVFDK+SEL+LALRL P SL+ISAA K K T PD E +LY+IAARNLREY+GVPSMTP KL KTL FLKL P+RLVKQGLAP LLAR AE N K+PLGD NNEDL ESVA +E+M+V ED KKEWNDGFVSVE A AKK+++H+AF+AGGIQLRPREV+PLLVAL V P RL + G V G+ LRAML AEK+ A+KR+G H + G G RGP GG L+
Sbjct: 21 TSSIKITFQGASRDVNVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSV-EDGKKEWNDGFVSVEPAEISFPANDNEEKNDAAPEAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKRHGPGHAGLQHLGHVERMAHSGPRGPTGGFARGPAGLI 345
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 305 bits (780), Expect = 4.870e-89 Identity = 181/303 (59.74%), Postives = 214/303 (70.63%), Query Frame = 3
Query: 99 TRSINVKFQGASRDVVLPNSVTLAGLQAAIASTFKVDLPARSGADDEPKHSDLSFTYKDPEGDDIVFDKDSELKLALRLSPSSLKISAACK-TKPTDKPDPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALLARADAETKN-----KLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTS-----------AAKKDVLHEAFVAGGIQLRPREVQPLLVALGVRPGRLVRFGYVDGRCLRAMLEAE-KRANKRNGH 953
T SI + FQG SR+V + TLA LQA IA+ F +LP RS A + K +DLSFTYKDP+GDDIVFDKDSEL LA+RL P SL+ISAA K KP +KPDPE LY+IAARNLREY+GVPSMT KL KTL FLKL PRRLVKQGLAP LLAR AE N K+ LGD +NNEDL ESVA +E+M+V EDDKKE N+GFVS + A+ AA + KK+++H AF+AGGIQLRPREV+PLLVAL VRP RL + G V+G+ LRAML+AE K A+KR+GH
Sbjct: 3 TSSIKINFQGTSRNVNVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSV-EDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAHKRHGH 304
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI) HSP 1 Score: 281 bits (720), Expect = 2.350e-83 Identity = 168/285 (58.95%), Postives = 197/285 (69.12%), Query Frame = 3
Query: 99 TRSINVKFQGASRDVVLPNSVTLAGLQAAIASTFKVDLPARSGADDEPKHSDLSFTYKDPEGDDIVFDKDSELKLALRLSPSSLKISAACK-TKPTDKPDPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALLARADAETKN-----KLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTS-----------AAKKDVLHEAFVAGGIQLRPREVQPLLVALGV-------RPGRLVRF 881
T SI + FQGASRDV +P VTL LQAAIA+ F +LP RS A + K +DLSFTYKDP+GDDIVFDKDSELKLA+RL PSSL+ISAA K +KP +KPDPE LY+IAARNLREY+GVPSMTP KL KTL FLKL P+RLVKQGLAP LLAR AE N K+PLGD NNEDL +SVA +E+M+V +DKKEWNDGFVS ES A AA + KK+++H+AF+AGGIQLRPRE L V++ V P RL+ F
Sbjct: 18 TSSIKINFQGASRDVNVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSV--EDKKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNLIHKAFIAGGIQLRPREGLLLGVSIFVTVKPKEEEPSRLLPF 300
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE) HSP 1 Score: 101 bits (251), Expect = 9.350e-19 Identity = 81/211 (38.39%), Postives = 97/211 (45.97%), Query Frame = 3
Query: 408 LYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALL---ARADAETKNKLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTSAAKKDVLHEAFVAGGIQLRPREVQPLLVALGVRPGRLVRFGYVDGRCLRAMLEAEKRANKRNGHQCMARGGGAGAPGAGGNRGPRGGLTM 1031
LY+ ARNLREYHGVPSMT L KT+V L+L+P RLV QGLAP+ LL + ADA G S ++VE D++ + T+ K +H A VA GI LRPRE +PLL ALGV P RLV+ G V LR R R G R G G PG + RGG M
Sbjct: 26 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLKGFSAADAHADTTDSSG----------SSGSEVEPEQADDNQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETNKRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREELR-----RSRPGGRRGGPSHLRHGHPGGPGGRXHXXXRGGRGM 221
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 3.960e-12 Identity = 60/155 (38.71%), Postives = 76/155 (49.03%), Query Frame = 3
Query: 393 DPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALL----ARADAETKNKLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGF-VSVESAATPAAXXXXXXXXXXTSAAKKDVLHEAFVAGGIQLRPREVQPLL 842
+P LY+ AARNL EYHGVPSMT L KT+V L+L+P RLV QGLAP LL A DA V+ D ++ +D DG + + AT + + A K +H FVA G+QLRPRE +PLL
Sbjct: 46 EPNPLLYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVS--DDSNTNSRDGTDIEHDHVATQDSIDIE-------TGASKHPIHAVFVAAGVQLRPRETRPLL 191
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 8.350e-12 Identity = 63/161 (39.13%), Postives = 83/161 (51.55%), Query Frame = 3
Query: 375 KPTDKPDPELELYQIAARNLREYHGVPSMTPAKLTKTLVFLKLKPRRLVKQGLAPDALL-----ARADAETKNKLPLGDDDNNEDLVESVATDVEMMNVDEDDKKEWNDGFVSVESAATPAAXXXXXXXXXXTSAAKKDVLHEAFVAGGIQLRPREVQPLL 842
K T +P+P + ++ AARNLREYHGVPS+TP L T+V L+L+P RLV QGLAP LL A DA++ + G + E + D+ + D D ND V+ S A A K + FVA G+QLRPRE +PLL
Sbjct: 32 KRTGEPNPLM--FKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGSG-GFEAEEEQANNQFSHDLSSNSSDGGDTG--NDNIVTQNSIGFEAR-------------ASKHPIQAVFVAVGVQLRPRETRPLL 174 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.66.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.66.1 >prot_P-littoralis_Contig10.66.1 ID=prot_P-littoralis_Contig10.66.1|Name=mRNA_P-littoralis_Contig10.66.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=451bp MTTNNKTANNTTNNKDSMTNTTTTTRSINVKFQGASRDVVLPNSVTLAGLback to top mRNA from alignment at P-littoralis_Contig10:309047..313045- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.66.1 ID=mRNA_P-littoralis_Contig10.66.1|Name=mRNA_P-littoralis_Contig10.66.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3999bp|location=Sequence derived from alignment at P-littoralis_Contig10:309047..313045- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:309047..313045- >mRNA_P-littoralis_Contig10.66.1 ID=mRNA_P-littoralis_Contig10.66.1|Name=mRNA_P-littoralis_Contig10.66.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1353bp|location=Sequence derived from alignment at P-littoralis_Contig10:309047..313045- (Pylaiella littoralis U1_48)back to top |