mRNA_P-littoralis_Contig10.62.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.62.1 vs. uniprot
Match: D7FQC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC6_ECTSI) HSP 1 Score: 645 bits (1664), Expect = 8.490e-223 Identity = 409/691 (59.19%), Postives = 462/691 (66.86%), Query Frame = 1
Query: 1 MTGHAGST-DLDPFLGKESLAALARMGFGKKEPRLDPHRFHGVGARTRLSLAGKRSMVTTSTHRHQHHKERVTINQVSDLAEIAREIDGFTKAGKRIPVAVWEKYDRVNKRHKKHEDMLALAAEARSKVDRKXXXXXXXXXXXQQGY--DQHEGIDGPNQEEITXXXXXXXXXXXXXXXXXXXXPKRQSS-----PPVSSQYTQKWRTSPAPFQGG-RCTFGAGRGDGEDDALETLARRATHAPTAKSESGPSSS-WGPQERDKLNEIYWDLGRPPRRGAGAEREHFFRYTQRHCMVFPNRSPAEVIERLKLMFSYNAMKEPNEREHWRKLHARRGFFPPQQGNAN---TDTSENLKRAAIPAAATKPQEPLDFSVFTADSEEPATAGSNPRAPQEPTPAALKAEPLFRRSGGGGNGDASTGGRLSAAAASYSAEAMKAASLSPSPSRPPRASLRAGGA-VSPFYDPVRPNSPAWGFGEASPI------PSSRAGXXXXXXXXXXXXXXAX----------------GRAGGFPDDSDHEDRPEGTQLLDYTSLGAQTMSGRATSPAFAFSREGLGSENLSMFQADKRPEPGPGSFRPNLSASSTHPGVRCGVKMGGRPGSRGGLGSGDDGGSXXXXXXXXXXPXXXXXXXXXXXXXXGHYSTWDAIGRQILSTRPSSPVATFATGDWELR 1965
M HAGST + DPFLGKESL+AL RMGFGK+E RL PHR+HGV ARTRLS+AGK SMVTTS HRHQHHKERVTINQV+DLAEIAREID FT AGKRIPVAVWEKYDR+NKRHKKHEDM+A+AAEAR K+ R+ QG D + +DGP+Q+E T SS +S + K T+P+PFQGG RCTFG+GRG+ E DALE LARR HA TAKS +GPSSS WGPQERDKLNEIYWDLGRPPRRG AEREHFFRYTQRHC++FP RSPAEVI RLKLMF YN +KEPNEREHW KL+A+RGFFP Q AN + T + RA +P A T+P++ LDFS ++ E P + P+ + + EPLFRR Y+AEA + AS++ SPSR RASLRAGGA VSPFYDPVRPNSPAWGFGEA P+ P SR XXXXXXXXXXXXXX X A G D HE+ T+LLDYTSLG QT+S RATSPAF F+R+GLGSENLSMFQADK+PEPGPGSFRPNLSA+STHPGVRCGV M XXXXXXXXXX X G Y WD IGRQILSTRPSSPV TFA+GDW+LR
Sbjct: 1 MGQHAGSTMEFDPFLGKESLSALGRMGFGKREARLGPHRYHGVAARTRLSVAGKSSMVTTSHHRHQHHKERVTINQVNDLAEIAREIDSFTTAGKRIPVAVWEKYDRINKRHKKHEDMMAIAAEARKKMKRRTRKREEQGQEAGQGCTADNKKDLDGPDQKEGTAFSTDKSSTGTRRHHPVSNNTPSSSSFTADSTELSLERMPKRHTAPSPFQGGGRCTFGSGRGEEEADALEKLARREAHASTAKSRAGPSSSSWGPQERDKLNEIYWDLGRPPRRGVHAEREHFFRYTQRHCLLFPRRSPAEVIARLKLMFRYNTLKEPNEREHWLKLNAKRGFFPQPQQKANAAASSTRNDTSRAVMPTATTEPRQSLDFSSLASEPEHPTATNGLQKWPRPGS----EEEPLFRRXXXXXXXXXXXXXXXXXXXXXYAAEAKRTASVASSPSRRLRASLRAGGAPVSPFYDPVRPNSPAWGFGEAPPVSPCSSRPCSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDNAHAEGVDDGGGHEE----TELLDYTSLGLQTISSRATSPAFGFARDGLGSENLSMFQADKKPEPGPGSFRPNLSATSTHPGVRCGVLMXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXGVGETSTRPSPGPGQYMAWDGIGRQILSTRPSSPVVTFASGDWDLR 682
BLAST of mRNA_P-littoralis_Contig10.62.1 vs. uniprot
Match: A0A6H5JI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI11_9PHAE) HSP 1 Score: 478 bits (1230), Expect = 4.870e-158 Identity = 344/682 (50.44%), Postives = 398/682 (58.36%), Query Frame = 1
Query: 25 DLDPFLGKESLAALARMGFGKKEPRLDPHRFHGVGARTRLSLAGKRSMVTTSTHRHQHHKERVTINQVSDLAEIAREIDGFTKAGKRIPVAVWEKYDRVNKRHKKHEDMLALAAEARSKVDRKXXXXXXXXXXXQQGY--DQHEGIDGPNQEEITXXXXXXXXXXXXXXXXXXXXPKRQSS-----PPVSSQYTQKWRTSPAPFQGG-RCTFGAGRGDGEDDALETLARRATHAPTAKSESGPSSS-WGPQERDKLNEIYWDLGRPPRRGAGAEREHFFRYTQRHCMVFPNRSPAEVIERLKLMFSYNAMKEPNEREHWRKLHARRGFFPPQQGNANT---DTSENLKRAAIPAAATKPQEPLDFSVFTADSEEPATAGSNPRAPQEPTPAALKAEPLFRRSGGGGNGDASTGGRLSAAAASYSAEAMKAASLSPSPSRPPRASLRAGGA-VSPFYDPVRPNSPAWGFGEASPIP--SSRAGXXXXXXXXXXXXXXAX--------------------GRAGGFPDDSDHEDRPEGTQLLDYTSLGAQTMSGRATSPAFAFSREGLGSENLSMFQADKRPEPGPGSFRPNLSASSTHPGVRCGVKMGGRPGSRGGLGSGDDGGSXXXXXXXXXXPXXXXXXXXXXXXXXGHYSTWDAIGRQILSTRPSSPVATFATGDWELR 1965
+ + FLGKESLAAL RMGFGK+E RL PHR+HGV ARTRLS+AGK V+DLAEI REID FT AGKRIPVAVWEKYDR+NKRHKKH+DM+A+AAEAR K+ R+ QG D + +DG +Q+E P SS +S + K RT+P+PFQGG RCTFG+GRG+ DALETLARR HA TAKS +GPSSS WGPQERDKLNEI E + + FPN S + + ++EPNEREHW KL+A+RGFFP Q AN T + R +PAA T+P++PLDFS ++ + PA Q+ PA + EPLFR Y+ EA + A L SPSR ASLRA G VSPF+DPVRPNSPAWGFGEA P+ SSR GXXXXXXXXXXXXXX X A G D HE+ T+LLDYTSLG QT+S RATSPAF F+R+GLGSENLSMFQADKRPEPGPGSF PNLS++STHPGVRCGV MGGR XXXXXXXXXX XX G Y WDAIGRQILSTRPSSPV TFA+GDW+LR
Sbjct: 2 EFESFLGKESLAALGRMGFGKREARLGPHRYHGVAARTRLSVAGK----------------------VNDLAEITREIDSFTSAGKRIPVAVWEKYDRINKRHKKHDDMMAIAAEARIKIKRRTRKREEQGQAAGQGCTADSKKNLDGSDQKEGIAFSTDKSSTGIRRHHPLSNNPSSSSSFTADSTELSLERMPKQRTAPSPFQGGGRCTFGSGRGEEGGDALETLARREAHASTAKSRAGPSSSSWGPQERDKLNEI-------------CESD-----CSNQRLSFPNTSSCSYCCTSSRLCA--VVQEPNEREHWLKLNAKRGFFPQPQQKANAAAGSTRNDTSRVVMPAATTEPRQPLDFSSLASEPQHPAATNGL----QKWLPAGSEEEPLFRXXXXXXXXXXXXXXXXXXXXXXYTTEAKRTAFLESSPSRRLHASLRASGTPVSPFHDPVRPNSPAWGFGEAPPVSPRSSRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDNAHAEGVDDGGGHEE----TELLDYTSLGVQTISSRATSPAFGFARDGLGSENLSMFQADKRPEPGPGSFCPNLSSTSTHPGVRCGVLMGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGSSTRPSPGPGQYMVWDAIGRQILSTRPSSPVVTFASGDWDLR 633 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.62.1 >prot_P-littoralis_Contig10.62.1 ID=prot_P-littoralis_Contig10.62.1|Name=mRNA_P-littoralis_Contig10.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=656bp MTGHAGSTDLDPFLGKESLAALARMGFGKKEPRLDPHRFHGVGARTRLSLback to top mRNA from alignment at P-littoralis_Contig10:269590..273246+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.62.1 ID=mRNA_P-littoralis_Contig10.62.1|Name=mRNA_P-littoralis_Contig10.62.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3657bp|location=Sequence derived from alignment at P-littoralis_Contig10:269590..273246+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:269590..273246+ >mRNA_P-littoralis_Contig10.62.1 ID=mRNA_P-littoralis_Contig10.62.1|Name=mRNA_P-littoralis_Contig10.62.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1968bp|location=Sequence derived from alignment at P-littoralis_Contig10:269590..273246+ (Pylaiella littoralis U1_48)back to top |