mRNA_P-littoralis_Contig10.59.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: A0A6H5JF24_9PHAE (G-patch domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF24_9PHAE) HSP 1 Score: 250 bits (639), Expect = 2.980e-73 Identity = 193/272 (70.96%), Postives = 205/272 (75.37%), Query Frame = 2
Query: 95 APPRIGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGGAGAGA-AGGDSTKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----ASALAQAASSCPSRARRVRSKDVKGFSSADLRAILGQAATTANPFLPSYPVVRSGYGAVEAPDASPALEESIGTKKXXXXXXXXXXXXXXXXXXSPLDAP-HRPRTRSMDETATTSETSAVTG-KRPR 886
A PR+GDT NQAWKNDKSKFGLKM+QKMGWTEGKGLGK+EDGVSEHVKV+KKSNNLGLGAT D+SGAAGWASAAVSFNGVLE LGKAYGG GA GG + KG XXXXXXXXXXXXXXXXXXXXXXXXXXXX A AQAASSCPSRARRVRSKDVKGFS+A+LRAILGQAATTA+P LPSYPVVR G G A A+ A E I KK + LDAP RPRTRSMDETA +E AV G KRPR
Sbjct: 4 AAPRVGDTQNQAWKNDKSKFGLKMMQKMGWTEGKGLGKNEDGVSEHVKVAKKSNNLGLGATRDSSGAAGWASAAVSFNGVLETLGKAYGG---GADVGGKAKMKGDKRTKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAMTAAQAASSCPSRARRVRSKDVKGFSAAELRAILGQAATTADPSLPSYPVVRGGCGTEGA--AAAATEPKISKKKSSNKKSKGSKS-------TSLDAPPRRPRTRSMDETAPPAEPPAVVGGKRPR 263
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: D7FQC4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC4_ECTSI) HSP 1 Score: 179 bits (455), Expect = 4.680e-48 Identity = 130/264 (49.24%), Postives = 143/264 (54.17%), Query Frame = 2
Query: 101 PRIGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGGAGAGAAGGDSTKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALAQAASSCPSRARRVRSKDVKGFSSADLRAILGQAATTANPFLPSYPVVRSGYGAVEAPDASPALEESIGTKKXXXXXXXXXXXXXXXXXXSPLDAP-HRPRTRSMDETATTSETSAVTG-KRPR 886
PR+GDT NQAWKNDKSKFGLKM+QKMGWTEGKGLGK+EDGVSEHVKVSKKSNNLGLGATHD+SGAAGWASAA DVKGFS+A+LRAILGQAATTA+P LPSYPVVR GYGA A A+ A + I XXXXX + LDAP RPRTRSMDETA +E +A+ G KRPR
Sbjct: 6 PRVGDTQNQAWKNDKSKFGLKMMQKMGWTEGKGLGKNEDGVSEHVKVSKKSNNLGLGATHDSSGAAGWASAA-------------------------------------------------------------------------------------DVKGFSAAELRAILGQAATTADPSLPSYPVVRGGYGAEAA--AAAATDPKISKXXXXXXXSKGSKS-------TTLDAPPRRPRTRSMDETAPLAEPAAIVGGKRPR 175
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: A0A835ZDF6_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF6_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.990e-23 Identity = 84/175 (48.00%), Postives = 109/175 (62.29%), Query Frame = 2
Query: 116 TLNQAWKNDKSK-FGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGGAGAGAAGGDSTKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALAQAASSCPSRARRVRSKDVKGFSSADLRAILGQAATTAN 637
TLNQAW N ++ K+++KMGW+EGKGLGK EDG++ H++V ++ NLGLGA D G+AGW++ SF+ VL L +AY KK XXXXXXXXXXXXXXXXX A+A + CPSRARRV++KD++ FSS DL+AILG A A+
Sbjct: 25 TLNQAWANSRTDGIAYKLMRKMGWSEGKGLGKDEDGIASHIRVQRRDGNLGLGAAKDRDGSAGWSATTTSFSAVLATLNQAY----------QPPKK---------------DXXXXXXXXXXXXXXXXXKAAAAGISSGDVCPSRARRVKAKDIRTFSSTDLKAILGHAPAVAD 174
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: A0A6V1RLJ9_HETAK (Hypothetical protein n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RLJ9_HETAK) HSP 1 Score: 100 bits (250), Expect = 4.140e-20 Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 2
Query: 77 ATASAAAPPRIGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGGA 367
A+A A A + D LN WKNDK+ FG +ML KMGW+EGKGLGK+EDG S H+ VSKK++ LGLG D G +GW+S+ SF VL L YG A
Sbjct: 3 ASAVAVARSNLKDNLNSHWKNDKTGFGFRMLSKMGWSEGKGLGKNEDGQSSHIIVSKKTDALGLGCDKDTIGNSGWSSSIQSFTDVLAQLNAKYGSA 99
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: A0A2R5GL57_9STRA (Protein PXR1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL57_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.330e-16 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 2
Query: 113 DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYG 361
DTLNQ W NDK+KFG KM+ KMGW++GKG GK+EDG + HVKV K++ LGLG D G + +FN VL +L +A+G
Sbjct: 8 DTLNQRWANDKNKFGYKMMLKMGWSDGKGTGKNEDGRASHVKVEKRTETLGLGTEEDGVGNVAFQGQINNFNDVLRSLNQAHG 90
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: A0A4D9CU62_9STRA (G-patch domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU62_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.180e-15 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 2
Query: 71 TMATASAAAPPRIG---DTLNQAWKNDKSK-FGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYG 361
T +TA+A +G DTLNQ W + K K FG KM+ KMGW++G+GLGK G + HV V+KK +N GLG+ D +G AGW A+ +F+ VL L + YG
Sbjct: 5 TESTAAAHLKSLVGPMQDTLNQHWVDGKKKNFGFKMMMKMGWSDGQGLGKELQGCATHVTVAKKVDNAGLGSVRDETGNAGWTEASATFDSVLSKLNETYG 105
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: A0A4P9WD92_9FUNG (G-patch domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WD92_9FUNG) HSP 1 Score: 82.0 bits (201), Expect = 1.280e-15 Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 2
Query: 74 MATASAAAPPRIG-DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLG 271
M A RIG D N+ WK+D+SKFGLKM+QKMGW+EGKGLG EDG +EHVK+ K +NLG G
Sbjct: 1 MGLAGPRIKQRIGLDPQNKQWKDDQSKFGLKMMQKMGWSEGKGLGAREDGQTEHVKIKLKEDNLGTG 67
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: K3WMW5_GLOUD (G-patch domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMW5_GLOUD) HSP 1 Score: 86.3 bits (212), Expect = 1.410e-15 Identity = 81/181 (44.75%), Postives = 106/181 (58.56%), Query Frame = 2
Query: 104 RIGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGGAGAGAAGGDSTKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALAQAASSCPSRA----RRVRSKDVKGFSSADLRAILGQAATTA 634
++G N AW D SKFG KML KMGW GKG+GK G + HVK++++S NLG+G + + GW+S A SF VL+ L K YG D + G XXXXXXXXXXXXXXXXXXXXX +A + SR +R+R+K+ KG+++ D+ ILG AA+TA
Sbjct: 25 QMGGMQNMAWAADTSKFGYKMLVKMGWAAGKGVGKDLQGQATHVKIARRSENLGVGCSLKQAEVQGWSSTATSFADVLKTLNKKYG---------DKSDSGSESDASSSLVKKKXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKTTISRRIVYHKRLRNKNAKGYAAEDMAGILGLAASTA 196
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: A0A662XRZ5_9STRA (G-patch domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRZ5_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 4.240e-15 Identity = 88/178 (49.44%), Postives = 116/178 (65.17%), Query Frame = 2
Query: 107 IGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGGAGAGAAGGDSTKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALAQAASSCPSRARRVRSKDVKGFSSADLRAILGQAATTANP 640
+G N AW D SKFG KML KMGW+ GKG+GK G + HVK++++S NLG+G + + GW++ A F VL+ L K+YG +G+ G+++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + R R+V KD K + +A++ AILG A++T P
Sbjct: 28 VGGLQNMAWAADTSKFGFKMLMKMGWSAGKGVGKDLQGQATHVKIARRSENLGVGCSLKQAEVQGWSNTAAGFADVLKTLNKSYGSKSSGSEDGEASDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGGEKTTVSRRLHYRKRQVN-KDAKSYGAAEMAAILGVASSTYKP 204
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Match: A0A0P1AVK5_PLAHL (Pin2 terf1-interacting telomerase inhibitor 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVK5_PLAHL) HSP 1 Score: 84.3 bits (207), Expect = 9.710e-15 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 2
Query: 107 IGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVSKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAY 358
+G N AW +D SKFG KML KMGW+ GKG+GKH G + HVKV+++S NLG+G + + GWA A F VL AL +Y
Sbjct: 28 VGGMQNMAWASDTSKFGFKMLVKMGWSAGKGVGKHLQGQATHVKVARRSENLGVGCSLKQAEVQGWAETAGGFADVLNALNNSY 111 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.59.1 >prot_P-littoralis_Contig10.59.1 ID=prot_P-littoralis_Contig10.59.1|Name=mRNA_P-littoralis_Contig10.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=355bp MATASAAAPPRIGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVback to top mRNA from alignment at P-littoralis_Contig10:262166..264387+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.59.1 ID=mRNA_P-littoralis_Contig10.59.1|Name=mRNA_P-littoralis_Contig10.59.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2222bp|location=Sequence derived from alignment at P-littoralis_Contig10:262166..264387+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:262166..264387+ >mRNA_P-littoralis_Contig10.59.1 ID=mRNA_P-littoralis_Contig10.59.1|Name=mRNA_P-littoralis_Contig10.59.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1065bp|location=Sequence derived from alignment at P-littoralis_Contig10:262166..264387+ (Pylaiella littoralis U1_48)back to top |