mRNA_P-littoralis_Contig10.51.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig10.51.1
Unique NamemRNA_P-littoralis_Contig10.51.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: A0A6H5JDS2_9PHAE (PAPS_reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDS2_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 1.130e-122
Identity = 226/405 (55.80%), Postives = 264/405 (65.19%), Query Frame = 3 
Query:  498 ENKARLRNALAKISGGGIADDFAAKLAQGLHAVRRALDDFGGG---GLAISFNGGKDACVVLYLLLFVLAERDELWRLSSSTTGRERIPVVYFEKEEFPEIEAFIKEVSDSYGFEFLRYAVSYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYRPAYELAEQEEHLERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGQKRFSSWDEKWDALDVDSAHDGTSAAXXXXXXXXXXXXXIISGDARSSEGGSVLMGIASNTIGIACRLPDGSKAPGGSGXXXXXXXXXXXXXXLPLTTIVVALVLAALGVRSSSGSSRGGEYD-SPPDK 1700
            +N++RL +AL K       D F  KL+Q L  VRRAL+DFGG    GLAISFNGGKDACVVLYLLLFVLAERDELWRL+SS +  + IPVVYFEKEEFPEI+AF+++VS++Y FEF RY+ SYKDGMQ+LV+S GI+ VIMGQRRGDPWTE M+ FT STPGWA+FTRVNPALEWKFC VWRLLRGSGLPYCVLYDQGYTSLGERGDT+KNEALRLPDG YRPAYELAE+EE+LER+                                     +G KRFSSWDE+WD+    +A D  + A             + SG            G    +   AC  P   +   GS               LP+TTI +ALV AA+GVRS+SGSSRGG +D S P K
Sbjct:   27 DNRSRLLHALDKTYTAATGD-FELKLSQSLDVVRRALNDFGGETGRGLAISFNGGKDACVVLYLLLFVLAERDELWRLTSSAS--KHIPVVYFEKEEFPEIDAFMQQVSETYQFEFQRYSKSYKDGMQDLVESHGIKAVIMGQRRGDPWTEDMEWFTASTPGWAEFTRVNPALEWKFCHVWRLLRGSGLPYCVLYDQGYTSLGERGDTSKNEALRLPDGSYRPAYELAEEEEYLERSPRTPTPGSPRSPSRVSPPRERDDGGGGD---------EGNKRFSSWDEEWDSS-AGTAQDRPAVAADDGGQDILDAETVSSGXXXXXXXXXXXXGRTGPSGNGACLPPPVKERGEGS-------LVGWVGSLLPVTTIALALVAAAVGVRSTSGSSRGGVHDNSAPHK 411
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: A0A835YNH1_9STRA (FAD synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH1_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.770e-59
Identity = 105/195 (53.85%), Postives = 135/195 (69.23%), Query Frame = 3 
Query:  585 LHAVRRALDDFGGGGLAISFNGGKDACVVLYLLLFVLAERDELWRLSSSTTGRERIPVVYFEKEEFPEIEAFIKEVSDSYGFEFLRYAVSYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYRPAYEL 1169
            L  VR+ALD +   GLA+SFNGGKDAC VL+LL+ VLAER +L  L        ++ V+ F+++EF  ++ F ++V++ YG     Y  +Y+DGM++LV + G + V+MGQR GDPWT+ MD FTPSTPGW +F R+NP L W +  VWR LR   LPYC LYD+GYTSLGE   T KN ALR PDG Y PAYEL
Sbjct:    6 LDVVRKALDLYTPLGLAVSFNGGKDACTVLFLLMTVLAERGQLGLLCGPGGDEGKMLVICFDRDEFAAVQEFTQKVAERYGLTLRHYKATYRDGMEDLVQNHGTKAVLMGQRYGDPWTDGMDDFTPSTPGWPEFVRLNPILRWPYDYVWRFLRRCRLPYCHLYDEGYTSLGEAVLTIKNPALRRPDGTYIPAYEL 200
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: A0A7S3SR65_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SR65_EMIHU)

HSP 1 Score: 169 bits (428), Expect = 5.930e-43
Identity = 88/218 (40.37%), Postives = 128/218 (58.72%), Query Frame = 3 
Query:  549 IADDFAAKLAQGLHAVRRALDDFGGGGLAISFNGGKDACVVLYLLLFVLAERDELWRLSSSTTGRERIPVVYFE-KEEFPEIEAFIKEVSDSYGFEFLRYAVSYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYRPAYELAEQEEHLERA 1199
            + D+F   L +GL     +L  +G   +  SFNGGKDA  +L+L+   LA   E     ++   RER+ V++FE ++EFPE++AF+++  + Y  E   Y+  +  G+++ +   G    ++G R GDP       F PS+     F RVNP L W +  VW+LLRG  LP+C LY++GYTSLG++ DT  N ALRLPDG YRPA+ L   +  LERA
Sbjct:   79 VEDEFGRALKEGLEVCAHSLRLYGPARVVTSFNGGKDAVAILHLMRAALAAHSE-----AAGGPRERLRVIFFEQRDEFPEVDAFVRDAVERYDLELCTYSDGFAAGLESCIADHGSAAFVLGTREGDPNGSGQGAFEPSSTWMPPFMRVNPVLRWSYAHVWQLLRGFALPFCSLYEEGYTSLGKQSDTEPNPALRLPDGSYRPAWLL--DDGALERA 289
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: A0A5D6XL81_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL81_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.130e-42
Identity = 94/231 (40.69%), Postives = 128/231 (55.41%), Query Frame = 3 
Query:  567 AKLAQGLHAVRRALDDFGGGGLAISFNGGKDACVVLYLLLFVLAERD--------------ELWRLSSSTTGRE------RIPVVYFEK-EEFPEIEAFIKEVSDSYGFEFLRYAVSYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGG---------YRPAYEL 1169
            A+L + L  ++RA+D FG  G+  SFNGGKD+ VVL+LL   +A+R               E+  LS     R       R+PV+YF+  ++FPE+ AFI+            Y  S+ +G+Q+++D   ++G+ MG R GDP TE ++ + PSTPGW  F R+NP L W + DVWR LR  GL YC LYD GYTSLG   DT +N AL   + G         Y PAY L
Sbjct:   26 ARLLKALEVIQRAIDIFGLEGVCFSFNGGKDSTVVLHLLRLAVAQRALAADPKPATTTSTAEVTHLSDEQLERRVRELLGRVPVMYFDSHDQFPEVRAFIERCVTECALSCHVYKCSFVEGVQDVLDKLHVKGIYMGVRGGDPHTEDLEHYAPSTPGWPAFLRINPILRWTYADVWRFLRECGLDYCELYDHGYTSLGNIYDTVQNPALWQKESGEGGEEGIGHYLPAYAL 256
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: A0A4D9DGI7_9STRA (PAPS_reduct domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGI7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.730e-42
Identity = 85/184 (46.20%), Postives = 118/184 (64.13%), Query Frame = 3 
Query:  630 LAISFNGGKDACVVLYLLLFVLAERDELWRLSSSTTGRERIPVVYFEKE--EFPEIEAFIKEVSDSYGFEFLRY--AVSYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYRPAYEL 1169
            LA++FNGGKDACVVLYL+   L  R     ++    G  R+ V+YF  E  +FPE+ +F+ ++S+ +   +  Y    S+KDGM++LV+ +G++ V +G RRGDP +   +   PS+PGW  F RVNP L W +  +W  LR   LPYC LYD+GYTSLG+   T +N ALR  +GGYRPAY L
Sbjct:   47 LALTFNGGKDACVVLYLVQLALRLRG----VAEGEAGG-RLKVLYFSPEHGDFPEVISFMAKISEDHHVTYTTYPAGTSFKDGMRDLVEKKGLKAVFLGVRRGDPHSLESEHLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRVEGGYRPAYAL 225
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: L1ITJ0_GUITC (MoCF_biosynth domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ITJ0_GUITC)

HSP 1 Score: 169 bits (429), Expect = 2.480e-41
Identity = 86/220 (39.09%), Postives = 129/220 (58.64%), Query Frame = 3 
Query:  546 GIADDFAAKLAQGLHAVRRALDDFGGGGLAISFNGGKDACVVLYLLLFVLAERDELWRLSSSTTGRERIPVVYFEKEE-FPEIEAFIKEVSDSYGFEFLRYAVSYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYRPAYELA--EQEEHLER 1196
            G++D    K  + +  ++ AL  +    +AISFNGGKDA V+L+L++  +A  +E W         E +  VYFE EE F E+E FI++  + +    +R    YKDG  +++D+ G +   +G R+ DP   +++ F+PST GW  F R++P L W + D+W  L    +PYC LYD GYTSLG + +T KN  LR  DG Y PA++L   E E+H+ER
Sbjct:   32 GVSDSMMKKCKEAMDTIQAALRLYEPKEMAISFNGGKDATVLLHLVMAGIASMNERWE------SMEELACVYFEDEECFEEVEEFIRQCQEQFHLRIIRLKTGYKDGCAHMIDNFGTKAFFLGTRKSDPHGHTVEKFSPSTAGWPSFMRIHPILYWHYADIWSFLLQFSIPYCKLYDCGYTSLGGKHNTDKNHMLRQRDGSYLPAHQLQLLESEQHMER 245
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: A0A7S1QS86_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QS86_ALECA)

HSP 1 Score: 164 bits (415), Expect = 2.960e-41
Identity = 108/238 (45.38%), Postives = 139/238 (58.40%), Query Frame = 3 
Query:  498 ENKARLRNALAKISGGGIADD-FAAKLAQGLHAVRR-ALDDFGGGGLAISFNGGKDACVVLYLLLFVLAERDELWRLSSSTTGRERIPVVYFEK-EEFPEIEAFIKEVSDSYGFEFLRYAV-SYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYRPAYELAEQEEHLERA 1199
            E + RLR  L      GI DD FAA   +   A RR AL     G LAISFNGGKDACVVL+L L  LA      R   + T  +   VV+F+  +EF  ++ F+  V  S     +     S+++GM++LV  RG+  ++MGQRR DPW   +  F+PST GW  F R+NP ++W + DVW  L G GLPYC LYD+GYTSLG   +T  N AL   DG Y PA+EL  ++E LERA
Sbjct:   43 EVRRRLREEL------GIHDDAFAAAFLRTAAACRRGALLYSTTGELAISFNGGKDACVVLFLWLAALAAAPT--RNGDTATVPQ---VVFFDSADEFDCVQCFVAWVVRSLDLPMITVQNRSFREGMEDLV-GRGVCAMVMGQRRNDPWMAGVSAFSPSTDGWPAFMRINPIIDWSYADVWTFLLGFGLPYCKLYDEGYTSLGSINNTLPNPALLRHDGSYAPAHEL--RDESLERA 266
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: K3WHV1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHV1_GLOUD)

HSP 1 Score: 162 bits (410), Expect = 8.970e-41
Identity = 95/242 (39.26%), Postives = 133/242 (54.96%), Query Frame = 3 
Query:  567 AKLAQGLHAVRRALDDFGGGGLAISFNGGKDACVVLYLLLFVLAER-------DELWRLSSSTTGRE-----------------------------RIPVVYFEK-EEFPEIEAFIKEVSDSYGFEFLRYAVSYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGG----YRPAYEL 1169
            A++ + L  + RA+D FG  G+  SFNGGKD+ VVL+LL  V+A+R        E  RL +ST+  +                             R+PV+YF+  ++FPE+  FI+    +Y      Y  S+ +G++++++  GI+G+ MG R GDP TE ++ ++PSTPGW  F RVNP L W + DVW  LR   L YC LYD GYTSLG   DT +N AL   +G     Y PAYEL
Sbjct:   28 ARVQKALDVIHRAIDIFGLEGVCFSFNGGKDSTVVLHLLRIVIAKRVLEEAQLAEKARLEASTSNAKTVTSPRQCFVSPALLDEDDLEARVEQAMKRVPVMYFDSHDQFPEVRDFIELCVANYSLNCHVYKCSFVEGVKDILEKLGIKGIYMGVRGGDPHTEDLEHYSPSTPGWPAFLRVNPILRWTYADVWSFLRECKLEYCNLYDHGYTSLGNIYDTVQNPALWQKEGDFEGHYLPAYEL 269
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: A0A7S2QJR4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QJR4_9DINO)

HSP 1 Score: 158 bits (399), Expect = 2.800e-40
Identity = 85/179 (47.49%), Postives = 109/179 (60.89%), Query Frame = 3 
Query:  651 GKDACVVLYLLLFVLAERDELWRLSSSTTGR----ERIPVVYFEKE-EFPEIEAFIKEVSDSYGFEFLRYAVS-YKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYRPAYEL 1169
            GKDACVVLYL L  LA       ++    G     E   V++F+ + EF  +  F+  V  + G   L    S +K GM+ LV S G+  V+MGQRRGDPW + +D+F+PS+ GW  F RVNP ++W +  VW  LR  GLPYC +YD GYTS+G  GDTA N ALR PDG + PAYEL
Sbjct:    1 GKDACVVLYLFLASLAA------VAGPAPGGGVVGEGQRVIFFDSDNEFSAVRDFVSWVVSTLGLRMLAVESSGFKRGMEGLV-SAGLSAVVMGQRRGDPWMDKVDMFSPSSDGWPAFMRVNPIIDWAYSHVWLFLRAFGLPYCAMYDAGYTSIGSVGDTAPNPALRRPDGSFAPAYEL 172
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BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Match: A0A7S0H819_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H819_9CRYP)

HSP 1 Score: 164 bits (414), Expect = 2.310e-39
Identity = 85/212 (40.09%), Postives = 125/212 (58.96%), Query Frame = 3 
Query:  570 KLAQGLHAVRRALDDFGGGGLAISFNGGKDACVVLYLLLFVLAERDELWRLSSSTTGRERIPVVYFEKEE-FPEIEAFIKEVSDSYGFEFLRYAVSYKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPALEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYRPAY--ELAEQEEHLER 1196
            K  + +  +  AL  +    LAISFNGGKDA V+L+L++  +A       +  +     ++P VYFE+EE F E+E FI+     +G   +R    YK+G  ++V + G +   +G R+ DP    ++ F+PST GW  F RV+P L W + D+W+ +   G+PYCVLYD GYTSLG + +T KN  LR  DG Y PA+  +L E E+H+ER
Sbjct:    2 KCKEAMDTIHGALRVYAPSELAISFNGGKDATVLLHLVMAGIAS------VKDAGKSMGQLPCVYFEEEECFEEVEEFIRYCESRFGLRIVRLKAGYKEGCAHMVTNFGTKAFFLGTRKSDPHGHLVEKFSPSTKGWPSFMRVHPILHWHYADIWKFILEFGIPYCVLYDCGYTSLGGKHNTEKNHMLRQRDGSYLPAHSLQLLESEQHMER 207
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.51.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDS2_9PHAE1.130e-12255.80PAPS_reduct domain-containing protein n=2 Tax=Ecto... [more]
A0A835YNH1_9STRA2.770e-5953.85FAD synthetase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S3SR65_EMIHU5.930e-4340.37Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
A0A5D6XL81_9STRA2.130e-4240.69Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A4D9DGI7_9STRA6.730e-4246.20PAPS_reduct domain-containing protein n=1 Tax=Nann... [more]
L1ITJ0_GUITC2.480e-4139.09MoCF_biosynth domain-containing protein n=1 Tax=Gu... [more]
A0A7S1QS86_ALECA2.960e-4145.38Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
K3WHV1_GLOUD8.970e-4139.26Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2QJR4_9DINO2.800e-4047.49Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A7S0H819_9CRYP2.310e-3940.09Hypothetical protein (Fragment) n=2 Tax=Hanusia ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig10contigP-littoralis_Contig10:241945..248188 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQC0
PFAMsMoCF_biosynth,PAPS_reduct
Model size3161
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K00953
KEGG ReactionR00161
KEGG Pathwayko00740,ko01100,ko01110,map00740,map01100,map01110
KEGG ModuleM00125
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003919,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006747,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042726,GO:0042727,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046443,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070566,GO:0071704,GO:0071944,GO:0072387,GO:0072388,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons5
Evalue1.18e-132
EggNOG OGsCOG0175@1|root,KOG2644@2759|Eukaryota
Ec32 ortholog descriptionFAD synthetase
Ec32 orthologEc-01_006670.1
EC2.7.7.2
Descriptionflavin adenine dinucleotide biosynthetic process
Cds size1452
COG categoryEH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig10.51.1prot_P-littoralis_Contig10.51.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig10 243400..247934 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789329.160088-UTR-P-littoralis_Contig10:241944..2433991680789329.160088-UTR-P-littoralis_Contig10:241944..243399Pylaiella littoralis U1_48UTRP-littoralis_Contig10 241945..243399 -
1680789329.2214432-UTR-P-littoralis_Contig10:247934..2481881680789329.2214432-UTR-P-littoralis_Contig10:247934..248188Pylaiella littoralis U1_48UTRP-littoralis_Contig10 247935..248188 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789329.1732008-CDS-P-littoralis_Contig10:243399..2436831680789329.1732008-CDS-P-littoralis_Contig10:243399..243683Pylaiella littoralis U1_48CDSP-littoralis_Contig10 243400..243683 -
1680789329.1834238-CDS-P-littoralis_Contig10:243731..2440721680789329.1834238-CDS-P-littoralis_Contig10:243731..244072Pylaiella littoralis U1_48CDSP-littoralis_Contig10 243732..244072 -
1680789329.19546-CDS-P-littoralis_Contig10:245010..2451921680789329.19546-CDS-P-littoralis_Contig10:245010..245192Pylaiella littoralis U1_48CDSP-littoralis_Contig10 245011..245192 -
1680789329.203385-CDS-P-littoralis_Contig10:245378..2455311680789329.203385-CDS-P-littoralis_Contig10:245378..245531Pylaiella littoralis U1_48CDSP-littoralis_Contig10 245379..245531 -
1680789329.2132995-CDS-P-littoralis_Contig10:247442..2479341680789329.2132995-CDS-P-littoralis_Contig10:247442..247934Pylaiella littoralis U1_48CDSP-littoralis_Contig10 247443..247934 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig10.51.1

>prot_P-littoralis_Contig10.51.1 ID=prot_P-littoralis_Contig10.51.1|Name=mRNA_P-littoralis_Contig10.51.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=484bp
MGLPCYHSDVLFNLRPPRVLWQSACRHIGSCIPWDEVGTTAPSVALVEYY
TRGEMKHDGSVEQQQQQDPQQQLQQQQQQQQENKARLRNALAKISGGGIA
DDFAAKLAQGLHAVRRALDDFGGGGLAISFNGGKDACVVLYLLLFVLAER
DELWRLSSSTTGRERIPVVYFEKEEFPEIEAFIKEVSDSYGFEFLRYAVS
YKDGMQNLVDSRGIEGVIMGQRRGDPWTESMDIFTPSTPGWAKFTRVNPA
LEWKFCDVWRLLRGSGLPYCVLYDQGYTSLGERGDTAKNEALRLPDGGYR
PAYELAEQEEHLERAPRTPVASPRSPTRGSGSGDGGDGEDGGDGGGVGGA
GGDGQKRFSSWDEKWDALDVDSAHDGTSAAASAAGGARSGGGGIISGDAR
SSEGGSVLMGIASNTIGIACRLPDGSKAPGGSGGGVGGALTGWVGSWLPL
TTIVVALVLAALGVRSSSGSSRGGEYDSPPDKD*
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mRNA from alignment at P-littoralis_Contig10:241945..248188-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig10.51.1 ID=mRNA_P-littoralis_Contig10.51.1|Name=mRNA_P-littoralis_Contig10.51.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6244bp|location=Sequence derived from alignment at P-littoralis_Contig10:241945..248188- (Pylaiella littoralis U1_48)
CGAAATCTCCAACGTCTCCAAAATCTCAAATCTCAAATCCTCGTCTGGAT
GGGGGGCGAACACATTGATGTATTTTTATTATTGATGTGTCTAAAATCTC
TGAGAGCTGTGAGAGCTGTGAGAGAGCTGTGATAGCTTTGAGAGCTGAGA
GAGCTTTTAGGGTTGGTTGAGTATCGGAGTTTCAGAGAACAGAGTGTCGG
TAGACAAGCGGCGGGAATTTAACGCGGCGGAACTACTGCATTTGGCAGGT
GCAGATGGGGCTACCATGTTACCATTCTGACGTTCTTTTCAATCTGCGGC
CCCCCCGAGTTCTTTGGCAATCGGCATGTCGGCATATTGGCAGTTGTATC
CCGTGGGACGAGGTTGGCACAACTGCACCGAGCGTAGCACTTGTAGAGTA
CTACACACGAGGTGAGATGAAGCATGATGGCTCCGTAGAGCAGCAACAGC
AGCAGGACCCGCAACAGCAGCTGCAGCAGCAGCAACAACAACAACAGGAG
AACAAAGCTCGACTCCGCAATGCACTCGCCAAGATTTCGGGTGGTGGCAT
CGCCGATGACTTCGCCGCGAAGCTTGCGCAAGGCCTCCACGCGGTGCGAC
GCGCTCTCGATGACTTCGGTGGCGGAGGTCTGGCGATATCCTTCAATGGG
GGCAAGGATGCCTGCGTTGTTCTGTATTTGCTTCTTTTTGTTCTCGCGGA
GAGGGACGAGCTGTGGCGACTATCGAGCTCAACAACAGGGAGAGAGGTGA
GACAGAGGGCTGGCGTGGTACTTGATCTGACACGTGACAGCACGAGTGCA
ACCTCGGTCGCACCGCTGTGGACCAACAACCAAGTACAGCGGAAAGACCA
GGACCAACCTCTGTTCCAAATCGCTAGATCGTCCTGACAAGTGCTTACCT
GTATGACTCTCTCTTTCTTTCTCTCTTTCTCTTCTCTCTGTGTCTCACTA
CTGCTGTAGTCCCGGAGAGCAGTGCTATCGCACGTCTACAGAGCCTAGTT
ACCACGTTCATGATATCATATGATGTGATATAGAAACGACTTCCTTTTGG
TGTTACCGGTACTGCGTCACCTGGTACCAGAGGTACAAGTACGATCTTAC
CGGTTTCAAACACTAAGTGTGTTGTCATCCCATATTCTCTGGCACACTAG
TCTGCACCCTGCGGTTCAAACTACAGGCTAGGCCCATCGACGGGGTCACA
CAGGAGGAAGGTCAACACAGGAGGAGTTACCCCCACCTTCCTTCTGCGGT
ACATGCGTGAGATTTTTTCTCGCGAGCAGGGATCCGCGATCCCTACCCTC
GTCGGCGAAGCCGAATCTGCTTTTACTAACAGCATAGCCGCTTTCAAAGT
AGCAAAGGAACACATTCACCGGGAACCGAACCCCCGTTCCTCTGCATCTA
GTGGCCAACGAGGGGACTAAGTATCAGGTATCGACGAGAGAGGAAACCCT
CAAGCATACCCATTGTCAACGCTGGAATAATCTGACGGGTTACAGCACTG
CTGTGTGGGTATGATATAATATCATCTGAGTGAAAGGTTTATCAACATGT
TTTTTGCCATTATATCTATAATGCTTGAAGTAATTGGTGGAGTCTCGGCG
CTCCCGGTTATATAAACCGTACTAGAAAGGTTAAAGGAATTGAGAAGCAG
TGTGCGTTGGAGGGCCGCTTCTCAAATAACTGCGTTAAGCCGTTTGCGTT
GCTGTTTGGTGGCGTATTTTATGAATCCTGCTTCACAGCAGTGCTACTGC
TGCAGAACAGCTGTGGTGTGCTGGTGTGCGTGTGCGCCAGCACAACGAAC
ACAAAACGCCTCTCATCATTTTTCACAAAAAAGGGACCCCAACAATAACG
CGCCTCCCGTAAGATAGCTGTGCACACAGGACACAGGCTGCGGTCAACTC
AGGAGCAGTGGGTAGATGCTATTTACCTCATCAGTTCAAGCCCTTGGTCG
TAGCGATCTGTGCTGAACTGGTTCCAAAGTGTTGCAAAATGTGGCCAATA
TCTCGGACACACAGACACACAGACACCATGAACCTCCAAAATTTAGTAAA
GGCACCCCTGTCTCCGATTTTTTTATTTTTTTTATTCGCACGAACACTCA
CACCTGCACATCACGACAAGTCGGTATGAATTTGAAGCAGTTCGACAAGG
AACTTTACACTTCACCTGTGGCCTGCTTCTCAATATCAGAAGAGCGCCGA
GGCGATTATTCCAACTGGGTTATTCCGATGTGCACAACGATAGAGTGAGG
TGCCAACGGACCACTATTTTGGTCTTTACTGAACCGGCAGACTGCTGTAT
GACGCGGGTTCAGACAGTTAATTAGTAGCAGCACCACATGATGATGACGA
CCATTTTTTGCACCCATCCAGAAGGGAGTTGCCACGTGTCGATGGGGGGG
CAGTTGGCGGCGGGCGACTCTTTGTCCACACACGCTGCGAGGCTGCTTGC
ACAAGCCTACCCCGCGTGGTGACAGTGCCCATCCAAGAAAGTATCGTGGC
AGGTCGACAGATATATGGTCGTCTCTACCACAGAGGTTGTGTGCTGTGTG
CTGCAGCTTGAAGGAGAACGGGCGTGAGTCCTCTCATGTATACTTTCAAT
GATTTTCGTGTTCCTGTGCATCACCTTCTTCTTTCCCCCTCTGTTCTTGT
GGTTCAGCGTATCCCGGTGGTATACTTCGAGAAGGAGGAGTTCCCCGAGA
TAGAGGCCTTCATAAAAGAAGTCTCTGACTCCTACGGTTTCGAGTTCCTG
AGATACGCCGTGTCTTACAAGGACGGCATGCAAAACCTTGTGGACTCCCG
CGGCATTGAGGTGCGGCGGCGTGCGTTTGACACGTGTACTTACCATACCA
TACCTGGGATGTATTTTCAGCGAGGATCAAAACCTGCTGGCGAGTATCCC
CTCGACGAAATCACGGAACGTGTACTCTGCAGGAGCATCAAAATACCTCT
CGACCCCCCACCCCCCCCCCTATTGCCAACACAAAACAACAACCAGGGTG
TGATTATGGGGCAACGCCGAGGAGACCCGTGGACCGAATCGATGGATATT
TTCACCCCTAGTACCCCGGGGTGGGCCAAGTTTACGCGGGTGAACCCAGC
CCTCGAGTGGAAGTTCTGCGACGTCTGGCGGCTCCTGCGCGGCTCCGGGC
TCCCGTACTGCGTTCTTTACGACCAGGGGTATGAGACATGTTGGAAGTCA
TCCAGCTGTACCAACGATTAAAAATTTAGCGGACAAGGGGGCGGTTAAAG
TTCCCGTGTCCTCGCGGTTGTTTTGTCATATCTGGGCGTCGTGTCTAGGG
TCGTAACAGAAGAAGCGCGTGGCCACTGGATGTACATGTTGCTGTAAATA
CATGGTGCGTGGCCTGGGTTCTTTTTTGGCCATGTGTTTTCGCCCAGTTT
TCAATAATCGTGTAGCATGTGATGATCCGATCGTCTACTGCTGTGGCTCC
CAACTTGAACTGAGAACAGAGGCCTTTTTTTTTTCATGTTCTCGCCACCA
AAAGAGACGCACGACTCCTGCGCTCCTCCTGATTTTCTACGTTAAAACTG
CACGGACCGTAGACCAGTCCACGTCACCACGCAGGCGCTGGTCTCTCAGA
GAGTCGCAGTCGGTAACGCCTCCACCGCTGTGAGCTCCTTTCTGTGCAAT
GTGCGGGACGAACGCACACACCTGTTCACCTTCGCAAAATTTCGTACGTC
GGAGCTTACAGCATTGGGGAGTTTTCATATGACTAATTTCGTAGAGGCCA
GTACTTGAAGGTGACGCGATTTGCTTTTCTTGCATTTTAATATGAGAAAG
GCAGGAGAAACGCAGGGGTTCTGCGCCTCCTCCGATTCTCAGGACCAGTT
CTCCGAAGACTTTATTGTCATCTTGAGAATGTGGGGAGCTACTAACCCTA
AGTCATTTTGAACTATTGAGCCCGAGAACGAAGCATCAAAACGAGGGAGC
TTGAGTCGGATAACAGCTTTCTGCCAAAACGAGTCAGCTGCACAGACCCG
CCCCATTCTCATCACAGCAGTAAGCCACCCACCAACGACTTTGCTGCACC
GCACTGCTTTACCACACCGCCCACATCGCAAAAAACAAACACCACACCAC
GGCATGCCCATCACAGGTACACCTCGCTCGGGGAGAGGGGTGACACCGCG
AAAAACGAGGCGCTGCGCCTTCCCGACGGGGGGTACCGACCGGCGTACGA
GCTCGCAGAACAAGAGGAACACTTGGAAAGGGCCCCTAGGACCCCGGTCG
CTTCGCCACGGTCTCCGACCCGCGGTAGCGGTAGCGGCGACGGCGGTGAC
GGGGAAGACGGGGGTGACGGTGGTGGTGTTGGTGGCGCTGGTGGTGATGG
ACAGAAACGTTTTTCTTCGTGGGATGAGAAATGGGACGCTCTGGACGTCG
ACTCTGCCCACGACGGCACGTCCGCGGCCGCCTCCGCTGCAGGAGGCGCG
CGGTCGGGTGCGGGTGCGGGTGCGGGAGCGGGGGCGGTGGCGGGGGCGGG
GGCAGGCGGGGGCGGGATCATTAGCGGCGACGCGCGATCATCGGAGGGAG
GCAGCGTGCTGATGGGGATCGCCAGTAATACTATTGGTATCGCTTGTCGG
CTACCTGACGGAAGCAAAGCGCCCGGCGGCAGCGGCGGGGGCGTCGGCGG
GGCCTTGACGGGCTGGGTTGGGAGCTGGCTGCCGTTGACGACGATCGTCG
TGGCGCTGGTGTTGGCGGCGCTTGGGGTGCGTTCGTCTTCCGGATCTTCC
AGGGGCGGGGAGTACGACAGCCCTCCGGATAAGGATTGATCGATTGATGA
AGTGGAAGTGATGTGCAGAAGATTAGGAAAATACCATACATATCCACACC
ACTCGTTATAGGAGGCGGTAGTGGAATGGGATTCTGGGCTCGGATGGGGT
TGTGCTAGATTGCCGTTTGTGTGGATGCGGTAGATGTGCGTTTCTCGCAG
CCTTGTTGAACATGGCTGTTTTTCAAAAGTGTGCGTGAAATATTAACTCA
TATACGGAGTCATCGCGTCCGTCTCGAGCATCATTTTTTCTATTATGGGG
GTTTGGTTCCTCCGTGCAGGGGTAGTTCGTTCATGGTGCCGTGGTTTAAC
GCTTATTAATCTAACTTCGAGTACGCAATTCGATTTTTTTTTCGTGTGTG
CGCGCAAGTGCATCAAGGCGTATTGACGGTTAGTTGTGGTTCTTTTAAGC
TCAACGGTGTTCTTGGAGGGTCGTTTTTTTTTCCAAAACCAACCAGTACC
TTTTTTTGACTGTAAATAATAATATACACGCTTGCCATTGTTTGCACTTC
GAAATCAATGCTTGTAGCAGTGTTCATTTCTGCTATTTAGGCGAAGTTTC
CCGGATACGAAAGTGCCAATACTGCTGTGATGTTGAAATGTTTGTGTCGG
GCGATTTGATTTTACGGGGAGCAGCGTGGTGTGGTGGTTGTCTGATGGTC
CGGTCTAGGTGATATACTCGTGGTTTCTAGCGTTATGACATGTATGTGAA
AGAGTTTTGTTTGAAGAAGAGTCGCGCGTGAGTGCGTGTGTGTGTTTGTT
TTGTGTAAAAACGTGCGTGTTTTGAGTGTGTTAGCATCCTTGAACGTCTA
TGTATGAGATAGGAGTGAGGGGGTCAGCGTTGCTAAAGAGAAAAAGAGAG
GGGATGTGGAGGGGAATATGCGGGTGATACAGTAAGTTAGTGGTTGTTGC
GTGTTTTTTTTTGTATGTTTTTTGTTGTTTGCATCGTGCATGATAACTCG
TACATATAGCATGTATGCGTGATTTGATTGTTCGATGTCACACTTTGCTC
CATGCATCATATTACGTTTATGACGTGTGTCCCCACATGCCGTGAAGTAA
TCACGGTAAAGAAACCCCATTTATTGCAACAGAGAGAGCAGTCGTGCGCG
TGCGCAACTCCTGAGGCGTGAATTGTTTGTGTTCATACTTCGACGTGTAT
ATTTTTGTTTTTCTTACTTGCTTCTGGTCTGAACTAGGAGTACACAGTAG
TACTGGACGGCTGTTTACTTTTCTTTTATCCGGGTATGAGTTCGACTACC
CATTTACCAGTACTACTTTGGGTACACGTTACCCTCAAGAGGATAGTGCG
GCCCGCTGACAAGAAAGTGGGCGAGGCTCGTTGTGAGCACAAGAAAAATA
TTTGGATTTTTCTAGAAAGAAGTGAACCCGCCGTGGATGACGTCACCTGT
CGATCAGGGATTTTTGACCAGTCAGAAATCTCCTTTAAAAAAAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig10:241945..248188-

>mRNA_P-littoralis_Contig10.51.1 ID=mRNA_P-littoralis_Contig10.51.1|Name=mRNA_P-littoralis_Contig10.51.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1452bp|location=Sequence derived from alignment at P-littoralis_Contig10:241945..248188- (Pylaiella littoralis U1_48)
ATGGGGCTACCATGTTACCATTCTGACGTTCTTTTCAATCTGCGGCCCCC
CCGAGTTCTTTGGCAATCGGCATGTCGGCATATTGGCAGTTGTATCCCGT
GGGACGAGGTTGGCACAACTGCACCGAGCGTAGCACTTGTAGAGTACTAC
ACACGAGGTGAGATGAAGCATGATGGCTCCGTAGAGCAGCAACAGCAGCA
GGACCCGCAACAGCAGCTGCAGCAGCAGCAACAACAACAACAGGAGAACA
AAGCTCGACTCCGCAATGCACTCGCCAAGATTTCGGGTGGTGGCATCGCC
GATGACTTCGCCGCGAAGCTTGCGCAAGGCCTCCACGCGGTGCGACGCGC
TCTCGATGACTTCGGTGGCGGAGGTCTGGCGATATCCTTCAATGGGGGCA
AGGATGCCTGCGTTGTTCTGTATTTGCTTCTTTTTGTTCTCGCGGAGAGG
GACGAGCTGTGGCGACTATCGAGCTCAACAACAGGGAGAGAGCGTATCCC
GGTGGTATACTTCGAGAAGGAGGAGTTCCCCGAGATAGAGGCCTTCATAA
AAGAAGTCTCTGACTCCTACGGTTTCGAGTTCCTGAGATACGCCGTGTCT
TACAAGGACGGCATGCAAAACCTTGTGGACTCCCGCGGCATTGAGGGTGT
GATTATGGGGCAACGCCGAGGAGACCCGTGGACCGAATCGATGGATATTT
TCACCCCTAGTACCCCGGGGTGGGCCAAGTTTACGCGGGTGAACCCAGCC
CTCGAGTGGAAGTTCTGCGACGTCTGGCGGCTCCTGCGCGGCTCCGGGCT
CCCGTACTGCGTTCTTTACGACCAGGGGTACACCTCGCTCGGGGAGAGGG
GTGACACCGCGAAAAACGAGGCGCTGCGCCTTCCCGACGGGGGGTACCGA
CCGGCGTACGAGCTCGCAGAACAAGAGGAACACTTGGAAAGGGCCCCTAG
GACCCCGGTCGCTTCGCCACGGTCTCCGACCCGCGGTAGCGGTAGCGGCG
ACGGCGGTGACGGGGAAGACGGGGGTGACGGTGGTGGTGTTGGTGGCGCT
GGTGGTGATGGACAGAAACGTTTTTCTTCGTGGGATGAGAAATGGGACGC
TCTGGACGTCGACTCTGCCCACGACGGCACGTCCGCGGCCGCCTCCGCTG
CAGGAGGCGCGCGGTCGGGCGGGGGCGGGATCATTAGCGGCGACGCGCGA
TCATCGGAGGGAGGCAGCGTGCTGATGGGGATCGCCAGTAATACTATTGG
TATCGCTTGTCGGCTACCTGACGGAAGCAAAGCGCCCGGCGGCAGCGGCG
GGGGCGTCGGCGGGGCCTTGACGGGCTGGGTTGGGAGCTGGCTGCCGTTG
ACGACGATCGTCGTGGCGCTGGTGTTGGCGGCGCTTGGGGTGCGTTCGTC
TTCCGGATCTTCCAGGGGCGGGGAGTACGACAGCCCTCCGGATAAGGATT
GA
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