mRNA_P-littoralis_Contig10.293.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig10.293.4
Unique Name	mRNA_P-littoralis_Contig10.293.4
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig10.293.4 vs. uniprot
Match: A0A6H5KVW8_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVW8_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 4.180e-109
Identity = 327/820 (39.88%), Postives = 397/820 (48.41%), Query Frame = 2

Query:  242 RTCVSCRKSKVKCSKVKCSKGLPCNRCRRLKLTCVAQVRGRGRPVASTTAAKKSPKSKHLRPEVQSSENGVGAGRVGGRRGXXXXTTKGGEAKSSF-----PGSGXXXXXXXXSFPVRGGAAGAPGASGVGIMSSARLPSRAREGPAVNTAVKLTSTLPAAAAAIVAADRDSSSDVITACRTEGGGVGSSFGSRLPLGLSLSSSDEVPPPLAAVALQ-TAMSCPVPFGYNGPVPG--------------GPGLGNVDAAYAQQHLDASSHSCPPHLMSAGHQVSSAXXXXXXXXXXXXXNMYASLRGSDY---------------------------GGARH--NNPARGGSISGSGSSSWRAVYDNGVCSAGGASVPNGTWLSGMEDDIKNDTNTHINAVNGQQQWEAISAP-LATSAAMVNGISNVDTGGL-----LSPPTRHHRANDGR--------------------------------------DGGFKSFNGRSFS-WAETMGD--------------------SKDGAAAADA----DAEDFLSSKSPDTQAPWLMGLPRDA-GDGSDAGEVLPQVNEGGVEPTDVITKVFWKLFDNKEVNRPKAIIVIRHWALLARERRSTQLMHKTVNMARALRINVAEILNDYGIYAMFHELLREAEAGNTVEPARSVNPRRVEASPYIQELLSPFAAVSMRVVLRGQSCFYHNDVCARLFLSTEEANELYATKNKDVWASFIHPDDHQAFFDCISMQLFFSPGHQSEFKEILKCRYKTGVVSLALVHFRCEFLDEGNYAAFGLSVLPLPKSDYMRNVE 2344
            RTCVSCRKSKVK                   L C+AQVRGRGRPVAS TA KKS         ++  E+GVG     G  G    T++      S      PGS         S    G       +   G++S A  PS A  G  ++                                   G    S GS     + LSSS EVPP LAAVA Q +A + P P  Y   V G              G G G + A + Q+H +A S + PP +M +G    +     XXXXXXXXX +Y +L  S                             GG+    N  A  GSIS +G S WR  +  G     GA+      L GM +  +ND    I+  NGQ  WE ++   +AT+ A + G  N  T         +P    H AN G                                       DGGF        S W E M +                     + GA         D   FLS KS D Q  WL+ + R A   G D+G   P  N G V+PT+ I   FWKLF    ++RPKA++VIRHWAL A +RRST LM +TV+MARAL INVAEILNDY IYAMFHELLREAEAGNT+EP         E   YIQE+ S FAAVSMRVVLRGQS F+HNDVC RLFL+T EANE+YA  N+DVWA+ IHPDDH+AFFD +SMQLF +PGHQSEFK++LKCR +TGVV LALVHFR EF D+GN+AAFGLS+LPLP+SDY++ VE
Sbjct:   86 RTCVSCRKSKVKXXXXXXXXXXXXX-----XLVCIAQVRGRGRPVASVTAGKKS---------LKLVEDGVGRSSKNG--GGADDTSRSARVAKSMAAEAEPGSSHANGSGSSSRESSG------ASPSSGVLSCAH-PSLAGGGGGID-----------------------------------GATAGSSGSMSTRKVRLSSSVEVPP-LAAVASQISAGTSPSPL-YAAAVDGEGSPRGDHGGDGGVGVGEGFLLAHHEQRHFEACSRALPPRIMQSGTPTIAPPQQHXXXXXXXXXGVYGALHNSSARPLSAHXXXXXXXXXXXXXXXXXXLSDGGSMTAMNASASPGSISSAGGS-WRGEFIGGP----GAAAHAVGGLGGMGEISRND----IDVPNGQ--WEYMNGTEVATTTAKLEGEVNAPTSSSSPAESFAPMPMGHMANSGXXXXXXXXXXXXXXXXEXXXXXXXXXXXXRGKGISSLSSDGGFNGAGKAPASTWVEAMDEHTHAVXXXXXXXXXXXXPTAGERGAXXXXXXXXPDGRIFLS-KSEDKQQRWLIAVERGAEATGRDSGGRSPGANGGSVDPTEAIVSGFWKLFREHGIHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDVCGRLFLTTHEANEMYACDNQDVWATCIHPDDHKAFFDNLSMQLFRTPGHQSEFKKVLKCRDRTGVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQKVE 833

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BLAST of mRNA_P-littoralis_Contig10.293.4 vs. uniprot
Match: D7FVP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP7_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 4.190e-74
Identity = 150/290 (51.72%), Postives = 182/290 (62.76%), Query Frame = 2

Query: 1640 EGGVEPTDVITKVFWKLFDNKEVNRPKAIIVIRHWALLARERRSTQLMHKTVNMARALRINVAEILNDYGIYAMFHELLREAEAGNTVEPARSVNPRRVEASPYIQELLSPFAAVSMRVVLRGQSCFYHNDVCARLFLSTEEANELYATKNKDVWASFIHPDDHQAFF------------------DCISMQLFFSPGHQSEFKEIL-------------------------------------KCRYKTGVVSLALVHFRCEFLDEGNYAAFGLSVLPLPKSDYMRNVE 2344
            +G V+PT+ I   FWKLF   EV+RPKA++VIRHWAL A +RRST LM +TV+MARAL INVAEILNDY IYAMFHELLREAEAGNT+EP         E   YIQE+ S FAAVSMRVVLRGQS F+HNDVC RLFL+T+EANE+YA+ N+DVWA+ IHPDDHQ                     + + +    +  H    + +L                                     +CR + GVV LALVHFR EF D+GN+AAFGLS+LPLP+SDY++NVE
Sbjct:  550 DGSVDPTEAIVSGFWKLFREHEVHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDVCGRLFLTTQEANEMYASDNQDVWATCIHPDDHQDLLRQLIDAALPYSWAPVRVQESVEVMQSAAVSHSERIRPLLVYPPYPAASAALRERTNALGVSTILFIVFLLRLPDHLQCRDRIGVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQNVE 839

[Close]

BLAST of mRNA_P-littoralis_Contig10.293.4 vs. uniprot
Match: A0A6H5KRC5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC5_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 6.670e-8
Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = -1

Query: 1907 LVFGGVQLVSLLRAQEEAGAHVVVVEAALPAQHHAHRHGRERRQQLLNVRRGFDAPRIHGTRR 2095
            LV  GV LV L+R QEEA AHVVVV+AALP +H+ HRHGRE R+ LL+V RG       G  R
Sbjct:  658 LVVAGVHLVRLVRGQEEAAAHVVVVKAALPPKHNPHRHGREHRRHLLDVLRGLLVTEFRGRHR 720

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig10.293.4 vs. uniprot

BLAST of mRNA_P-littoralis_Contig10.293.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KVW8_9PHAE	4.180e-109	39.88	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
D7FVP7_ECTSI	4.190e-74	51.72	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KRC5_9PHAE	6.670e-8	58.73	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig10	contig	P-littoralis_Contig10:1054164..1063910 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	4156
Hectar predicted targeting category	other localisation
Exons	9
Cds size	3069

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig10.293.4	prot_P-littoralis_Contig10.293.4	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig10 1054234..1062346 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789337.704733-UTR-P-littoralis_Contig10:1054163..1054233	1680789337.704733-UTR-P-littoralis_Contig10:1054163..1054233	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig10 1054164..1054233 +
1680789337.7867374-UTR-P-littoralis_Contig10:1062346..1062375	1680789337.7867374-UTR-P-littoralis_Contig10:1062346..1062375	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig10 1062347..1062375 +
1680789337.7953122-UTR-P-littoralis_Contig10:1062896..1062999	1680789337.7953122-UTR-P-littoralis_Contig10:1062896..1062999	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig10 1062897..1062999 +
1680789337.8066278-UTR-P-littoralis_Contig10:1063025..1063910	1680789337.8066278-UTR-P-littoralis_Contig10:1063025..1063910	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig10 1063026..1063910 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789337.7172363-CDS-P-littoralis_Contig10:1054233..1055806	1680789337.7172363-CDS-P-littoralis_Contig10:1054233..1055806	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig10 1054234..1055806 +
1680789337.7275097-CDS-P-littoralis_Contig10:1056313..1056404	1680789337.7275097-CDS-P-littoralis_Contig10:1056313..1056404	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig10 1056314..1056404 +
1680789337.7361984-CDS-P-littoralis_Contig10:1056744..1056817	1680789337.7361984-CDS-P-littoralis_Contig10:1056744..1056817	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig10 1056745..1056817 +
1680789337.7502613-CDS-P-littoralis_Contig10:1057319..1057398	1680789337.7502613-CDS-P-littoralis_Contig10:1057319..1057398	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig10 1057320..1057398 +
1680789337.7599401-CDS-P-littoralis_Contig10:1060007..1060216	1680789337.7599401-CDS-P-littoralis_Contig10:1060007..1060216	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig10 1060008..1060216 +
1680789337.7678685-CDS-P-littoralis_Contig10:1060780..1060894	1680789337.7678685-CDS-P-littoralis_Contig10:1060780..1060894	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig10 1060781..1060894 +
1680789337.7761242-CDS-P-littoralis_Contig10:1061416..1062346	1680789337.7761242-CDS-P-littoralis_Contig10:1061416..1062346	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig10 1061417..1062346 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig10:1054164..1063910+
coding sequence from alignment at P-littoralis_Contig10:1054164..1063910+

protein sequence of mRNA_P-littoralis_Contig10.293.4

>prot_P-littoralis_Contig10.293.4 ID=prot_P-littoralis_Contig10.293.4|Name=mRNA_P-littoralis_Contig10.293.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1023bp
MKKRPRAEEGATTPSEEQEEEEEEEEDHTMNDSPTSNDTSDDGREEMIGG
VEDGEPPRTCVSCRKSKVKCSKVKCSKGLPCNRCRRLKLTCVAQVRGRGR
PVASTTAAKKSPKSKHLRPEVQSSENGVGAGRVGGRRGGRAGTTKGGEAK
SSFPGSGSGSSSSSSSFPVRGGAAGAPGASGVGIMSSARLPSRAREGPAV
NTAVKLTSTLPAAAAAIVAADRDSSSDVITACRTEGGGVGSSFGSRLPLG
LSLSSSDEVPPPLAAVALQTAMSCPVPFGYNGPVPGGPGLGNVDAAYAQQ
HLDASSHSCPPHLMSAGHQVSSAAAEQQPQQQQEQQNMYASLRGSDYGGA
RHNNPARGGSISGSGSSSWRAVYDNGVCSAGGASVPNGTWLSGMEDDIKN
DTNTHINAVNGQQQWEAISAPLATSAAMVNGISNVDTGGLLSPPTRHHRA
NDGRDGGFKSFNGRSFSWAETMGDSKDGAAAADADAEDFLSSKSPDTQAP
WLMGLPRDAGDGSDAGEVLPQVNEGGVEPTDVITKVFWKLFDNKEVNRPK
AIIVIRHWALLARERRSTQLMHKTVNMARALRINVAEILNDYGIYAMFHE
LLREAEAGNTVEPARSVNPRRVEASPYIQELLSPFAAVSMRVVLRGQSCF
YHNDVCARLFLSTEEANELYATKNKDVWASFIHPDDHQAFFDCISMQLFF
SPGHQSEFKEILKCRYKTGVVSLALVHFRCEFLDEGNYAAFGLSVLPLPK
SDYMRNVELEPAAANAHAGAGAGAGSSDGGSGDGAAASAAAGDSDSPLAS
LPSRLSSGQQGTADGLSRGGGGSGGVPSAAATTTTLCDVSLPVEGSISGG
SNSSSSASSSPATGAATVAAARAPAVARAASAAGTGGGGGREGAGGGPVL
LLQPPPPFDVEPMLQQREVGSWPPRAGGAWGGGTARSAAWAAVEMGGGRS
IGLRDDNGLNPWRESVSGPAFHSQGGGAGTSGGGSGGGSAFQEEAGWGSG
RESGSGRRGHPAVGLGPPVAGR*

mRNA from alignment at P-littoralis_Contig10:1054164..1063910+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig10.293.4 ID=mRNA_P-littoralis_Contig10.293.4|Name=mRNA_P-littoralis_Contig10.293.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=9747bp|location=Sequence derived from alignment at P-littoralis_Contig10:1054164..1063910+ (Pylaiella littoralis U1_48)
ACAGCAACAGCATACCGTGTTCAATACGAACCCGCAACAGGGACAGAACA
AGGGAGAGAGAGAGACGGCAATGAAAAAGCGGCCACGTGCGGAGGAAGGG
GCGACGACGCCATCAGAGGAGCAGGAGGAGGAAGAGGAGGAAGAGGAGGA
TCACACCATGAATGACTCCCCGACGTCCAACGACACATCTGATGACGGCA
GAGAGGAGATGATAGGTGGAGTGGAAGATGGAGAACCACCCCGCACTTGC
GTGTCCTGTCGAAAGAGCAAGGTCAAGTGCTCCAAAGTCAAGTGCTCCAA
AGGTTTACCGTGCAACAGGTGCAGACGACTGAAGCTCACCTGCGTAGCCC
AAGTGAGGGGGCGAGGCCGTCCGGTTGCGAGCACGACAGCTGCCAAGAAA
AGCCCCAAGTCGAAGCACCTGAGGCCGGAGGTCCAGAGCAGCGAGAATGG
CGTCGGTGCCGGCCGTGTCGGTGGCAGGCGCGGCGGGAGAGCGGGGACAA
CGAAAGGAGGAGAGGCTAAAAGCAGTTTTCCTGGCAGCGGCAGCGGCAGC
AGCAGCAGCAGCAGCAGCTTTCCGGTGCGGGGCGGGGCGGCGGGGGCACC
AGGGGCTTCTGGAGTAGGTATAATGTCTTCGGCTCGTCTTCCTTCCCGGG
CACGGGAGGGCCCCGCCGTCAACACGGCGGTGAAACTGACATCAACGCTG
CCAGCGGCGGCAGCGGCGATCGTTGCCGCTGATCGCGACAGCAGCAGCGA
TGTAATTACTGCGTGTAGGACCGAAGGTGGTGGCGTTGGCAGCAGTTTTG
GCAGCAGGCTTCCCCTCGGGCTCTCCTTGTCCTCCTCGGACGAGGTTCCT
CCGCCTCTCGCCGCTGTCGCTCTTCAAACCGCCATGAGTTGCCCGGTCCC
ATTTGGGTACAACGGCCCTGTTCCCGGCGGTCCTGGCCTAGGCAATGTTG
ATGCTGCGTACGCACAGCAACATCTCGACGCTTCGTCTCATTCATGCCCA
CCACACCTCATGTCGGCGGGGCACCAAGTGTCTTCAGCAGCAGCAGAGCA
GCAGCCACAGCAGCAGCAGGAGCAGCAGAATATGTACGCAAGTTTGAGGG
GCAGCGATTATGGGGGCGCGAGGCATAATAATCCCGCAAGAGGTGGCTCC
ATCAGCGGCTCCGGCAGCAGCTCCTGGCGAGCTGTTTACGATAACGGCGT
TTGTTCCGCCGGTGGTGCTTCAGTTCCAAACGGTACTTGGCTTAGCGGGA
TGGAAGACGACATCAAGAACGACACCAACACCCACATCAACGCCGTCAAC
GGCCAACAGCAGTGGGAAGCAATCAGCGCTCCTTTGGCCACTTCAGCAGC
AATGGTCAACGGCATCAGCAATGTGGACACGGGAGGTCTGCTCTCCCCCC
CCACCCGTCACCACAGGGCGAACGACGGGCGCGATGGGGGCTTCAAGAGC
TTCAACGGAAGGAGTTTCTCGTGGGCGGAGACGATGGGCGACTCCAAGGA
CGGTGCGGCTGCCGCCGACGCCGACGCCGAAGACTTTTTGTCGTCGAAAT
CGCCAGACACACAGGCGCCCTGGCTCATGGGTCTTCCACGGGACGCTGGT
GATGGTTCTGACGCGGGGGAGGTGTTGCCACAAGTCAACGAAGGTGGGGG
TAATGCGGAGAGTGTGTTACGTGTTTCTTTTACCCAGTTTTCTTATCTTT
TGGTGGGAATTAAGGAGGTATGCGCCGTTTTTGAGACCGAGACCGTTCCT
GATTCCTGACCATGAGGACGCTTGACTGGTGAGAGAAAGGTCGTGGTTTC
TTTTGGTGCTGCTGGTGGTTCCACGCTTGGGCAACATACCCTTACATAGA
TGGACAGAAGAGAGCAGCGCAAGGGTTGGGTGCTCGAGTCGCCGATCGTT
TCAAGAATTGCGCCGCATCGCGCGCCGAATCAATCAAATCAAACCGTAAT
ACCTGTCGATTACTGCCGTTCTGTCGTTTTTTTATTTTTTATTTTCGGCG
ACGCTGGTGAAAGGACGCGCATGGTACATAACGCGCGTCGCGTTTGTCTC
TCCCAAGACTCATTCGCTCACTCCCTATGCTGCACGTCTACGCCTCTCTT
ACCTTGTACGTTTCGTCCCCCCCTCGCCTTGGCTCCCACGTGGAAATCAG
GTGGCGTGGAACCGACCGATGTCATCACGAAGGTCTTCTGGAAGCTCTTT
GACAACAAGGAGGTCAATCGCCCGAAAGCGATCATTGTCATGTGAGGAGC
GAGGGCACTTTGGCTGTGTCTCACGGATGGCGTTGGTAAAAATGCGTAAG
AACGACGTGCCCTGTTTCTAGGTGCTTGGACTTGGGAAAGATGCATCAAG
TTTGTGACGAGCTGCGAAGGAACACTCTGCGTTGTAGGCGTCAGGCTGGG
CTAGGAGGCCCTCGAAGCAGGGCAATAAAAGTTGGTAACTCAATCTCCAT
GAGTTGGGAGGTGATGATAACACACATTTGTTTTGTTGCGATAACGGTTA
TCCTCGTGTCAGGTTTTACCCGTGCTGACAGCCATTTTTTTTTTCTCGTC
CGTCGCGTCTTGCGTATATTCGGTTTGTCAGCCGGCATTGGGCGCTGCTC
GCCCGCGAAAGGCGAAGCACGCAACTCATGCACAAGACCGTCAACATGGC
CAGGGTACGGATTGCCTCTTTGTTTTTTCCGTCGTGTTTGCTCCCGATGG
CATGAACACCGCCGTGCTGTTTTCGGGCGCTGTTTTCCCGGGCGCGCGCG
CGTGTTTTTGTAGGGTAATCAGTGTGGTGGTCGGAGGGGATCACGCGGTT
TTTGGCGCCGCGATGTTTTATGGAGGCGTTCAGCTGTGTTGCGTCACGAA
TGGTTGTACAGAATTTTAGGCTCGGTGGAGTTGGTACAGCCGAAGGAGCC
CCCAAATCTTTTGAGCATCGCGTTGTAGCACGTGGACGGGTGTATTCGTA
GCTGCAGCGAGAATAGTACAAGTTTTCAGGTTTATAATTCTCTGGGACAC
GTGGACGGAACGGTAATGCGAGTTCCTTTCGCGTGCGGCGGCATCGCTTC
TTCATGGCCCGTGACTGATCACCAAGTCTCCCAACTCCACCCTCCAACTT
TTCGTGCTCGACTGCTGACTGTCTGCTCTGTAAATGTGTCGTGTATTTCG
GCCCAGGCGCTGCGCATCAATGTGGCCGAAATCTTGAACGACTACGGCAT
TTACGCGATGTTTCATGAGCTGCTGCGAGAGGCCGGTAAGTGGCGCAGTA
ATGCATTTACACCACCGCCGCCTGCTGTCATGCCCTGTAGCCGAAATGTT
GGCATCCGGTGTGTCGGAGCTTGTTCGCAGCCCATGTGGAGCAACCACAG
AACGTGCACGACGACAAAGGTTTGTCAAGTGTTTGGTAGTTTCGCACGTC
AAGCTCTGTGACCGCCCTTCCCCCCCAAGGATGTCACTCGAGAAAGCCAA
CAAACCCAGCGAATGCCCCAGCCTTTCCGCTGACGAGAATCCGAGCGGGC
AAATTTCGACCCATCGCACTCGTGCGCCGTGCGCACGATAACGGAGCATA
TTGTCGTCTGCACGATGTTCCGGTAAGGTAAAACAGCCCCGTGTGTGATA
TTCCCGCATGCCACTCCTTCCGTATAAGTAAAGTGAGACATGTGTTCGTT
TCTCGTTGCTTCGGAGCGGCCTGTCACTCTCCGTCGTGATGTTTCTCGCT
GTGGTTGACCGTCACTCGCCGTGTTACTCCGTTGATCAACCAATTCCATC
AGTCGACCTTTCGCTTCTTATTTTGCTCACTGTAATTCAGTCCTTCCGCG
TATCGTAGGTGCCAAACCCATCGACCCTTATACCGCTCCGTCCATACAGG
AGTAGTTATATTTTTTTTGTTTTAGAAAAGCAGAAAAAACACGGAAGAAA
GAACGGGACAGACTGGGTTGAGTTCTTAACAAGAGAGAGGAATCAATCGT
TGGCCGGGAACTGTAACACAGCAAAATTGTAACTCCCTTACCCAACTCTT
GTCAGGTCAAACGGCACTTGTGTAGGGGGAACCCTCCAAGTGTGTTGTGT
ACAACGAAGTGTATTACTCCATCCCCACACAGTAACACACGGCGGCATCT
GAAATATTCAACAGACAGCCGGGCTCCTAATTTTTCCTATTGCAGGTGTA
TGTGTGTGTTGGTTGGCATCCCGTCTATTCTGAATGCCAGTCTAAACCTT
TCGGTATGTGCGGGCGCATCGGCCGGGGTAACACAGCAGGAAGGACGAAA
CATGATTTTTTTGTTCTCCACCTTTCTTCTGCGGTTCTTGCCTAATTTTC
ACCGCGTTTGGCCGCCAGTACAGCGATGAAGAGCAGCCGTTACCGGCAGA
GTCGAGGCTGAGTGTGAGATAAAGCGGTGGGGGGAAATCGTTTGTTGCGC
GGAAATGATATCGCCGTACTGTATACAGAATAGATACCAGGTGCCGCACT
TTCAAAGTGGATATGTGTCGGTGGGATCATGGATGGGAAATGAACACATG
TTGACAGCAGTACACATTTGTCCATGTTTTTTGCGCAACAGAGGTGTCAC
CGGGGTTTGATCAATTCCATGACCGTATATTTCCGTTTGCATCGAAAGTA
TGAACACAAATTCGACTTGACAGTCGACGGGGGGTAAAGGACGGTTGAAC
CCTTCTCGGGATAAAAAGCCGAAGAGCAATTATGGCAAGCACCGCAGGTG
GTGGGTGGAGGTAAAAAAAGAAAAAAAACTCCTGTATGACACTCCTTCTG
AATGACCCCGGCTGGGGCGCCCAGTCATACCGAAAGGTGTAGACTGGCGT
CCAGAGTAAATGGGATGAAAACACACACACACACACACACACACAATCCC
AACATATAAATGAATGAGTGCGATATTAGGTCCGTTAGTCCAGGGGTTCA
TTGTTTGGGGCTTTGACCCCTTGCCCAAATGAAATTACGGACCCCCCCTC
CCCGCACCTGAGCTATCCTGTTCAGCATATCAGTAGACAGCACCAACCAG
AACTCGGCCAAGAGGACGCCACTAGCGATCAAATATGTTGAAGCGTGTGC
TCCAGTGTTCTAACGTTGGTCACAGAAAGGTTGGTTGGTGTGATCTTCGA
CTGTGGCTTGATTTTGGCGGCGGTGTATGTTGAGGTACCGTAGGAAAATC
CGGTGAGAACGGATGACGTTGTTCGATCCTGCAGTCAAATAGGCTCTCAA
CCTTGTTCTTCTTCACCGTATTTTTCTACATCAACCCGCACCGCAGCGAG
AATGTCGACACAGCCAAATCCCACACCCACCAAACTTCTTGTGGACAAAC
TTCACAACACTAGAGCGCAACCTCCAATGGTTTAGGTCTCGATTGGTATC
CCAGGGGGCGTGGTCTGCTTGGTGAAATCTCTTGTTGTTCAAAAAAAGTA
GTCATGTCAGCCGTTTGGGCTCTCAGAATTTTGAATATTGCAGCTGAGGG
GGGTATACCTATGAAAAAAATCACCTACCAAAGACTGTGCCGTTAGAAAC
AATCCGAGAGGTTTTTCACTTTAAAAATATCCATGGATTAAATATCCCAG
TCTTTTTTCAACGCAAATACATTTTGAGCAAATCGTGCATAAAATTGCTG
GTTTGCTCTTTATATATGGGGTAGCCCAATTATTTACAAGTTTTTCTGCT
TATAATATCCTGTGTTGACCTTCCTGTCTGTGTGACCCCCGGACGGATGC
GCCCGTACACACCGAAAGGTGTAGACTGACGCTGATAGCATATGAAAAAC
TAAACACACACACTACACCCATCAAAGTAACGTAGCATCCAGCACCCATG
AAACTAACGTAGCTTGCGCGACTTTTTTTTTGTCAATGCGACAGAGGCCG
GGAACACGGTCGAGCCGGCGCGTTCCGTGAATCCGAGGCGCGTCGAAGCC
TCGCCTTACATTCAGGAGCTGCTGTCGCCGTTCGCGGCCGTGTCGATGCG
CGTGGTGCTGCGCGGGCAGAGCTGCTTCTACCACAACGACGTGTGCGCCC
GCCTCTTCTTGAGCACGGAGGAGGCTAACGAGCTGTACGCCACCAAAAAC
AAGGCAAGGCTGCCGTCATGCAGGGGATGTTCGCAAGCAGCCACGGCAGC
TCAGCGGTAGCGCGAGGAGCAGTAGCACGAGAAACAAGCAGGCTCTAATG
GTGTTGGGGCCGTTTCGTTTTTCGCTTGTGATGATCTTCACCACCGAAGG
AGGCGTTTGCGGTCTTCGGCACCCGATGAAAGCATGATGTACACGATTAT
AATATTACATCATGCGTACCATAGATTTCATACGGTGGGTCAAAAACATT
TGAAGATCGCCCGAACTGCCCGTAATTTCACGTGTTACCACGTCCCTCTC
TGTACACCTCGTATGTATACCTGTCGTGTTTGCGTGGGCCCTCTCTCAGT
CGGGCGACGCCCCTCGGGCTTGCCGCTGGCCGCCATCCCGTGCCGGCAGT
GTCCCCGCCGATGGAGTAATGTTCTCTCCAAAAAAATGTGCTTACTTTGT
CTGCCAGTCTGCCTGGTTGACTTTCTGTCTGATTGCCTTTCTGCCTGTCT
GTCTGTCTGTCTGTCTGTCTGTCTGTCTTTCTGTCTGTCTGTTCGCCATG
ATTCGACTTAATTGCAGGACGTGTGGGCGTCTTTTATTCACCCGGACGAC
CACCAGGCGTTCTTCGATTGCATTTCGATGCAGCTCTTCTTTTCGCCCGG
GCACCAGTCCGAGTTCAAGGAAATCTTAAAGGTGTGTGCGTATCATAAGA
GCACGGTACGTTTCATGAAGTTATAAATGACGCACATCCCGCTTGTTGTG
GCGGACGAAATAAAAGGGCGTGGTGGTGGTGGCGAGACGGATATTTGTAC
ACGGATTGTGCTTCATAGTGTGGTTGGTGCCACTTGCTGCTGCGCATATG
CGGGCAGGACCGCTGGGCTAGTACTCTACTAGTGTGCGACCCTTTGGCTT
TGTTTTCGAGTGGTTGCGTTGGTCCTTACGCTTACTTGAATATTCTAAAG
CGTCGTGGCGGTACATGAGGCTTCACGGCCCGTAGGCTGAGTCCTTCTTG
AGAGTTGTTGGGCGCAATCCTCGGATGTACGAGGGGGCAACAGCGGTCTT
GATCTCCCTCTTGTCGAAGTTCTTGCGCTTTTGACAACAATCCAGACTGC
CGCGCCAGAAACGCCTCCCTATCCCCTGACGCCTTGGGCAATGCGGCTGC
ATCCACCTTTTTCTTACCTTTTTTTTGTTTAATCTTTTACGCCGCGGTTA
CAGTGTCGGTACAAGACGGGCGTGGTGTCCCTAGCCCTGGTCCACTTTCG
TTGCGAGTTCCTAGACGAGGGTAACTACGCAGCTTTCGGGCTCAGCGTTC
TCCCCTTGCCGAAGTCGGATTACATGCGTAACGTCGAGCTGGAGCCGGCA
GCTGCAAACGCGCACGCCGGCGCTGGCGCCGGCGCTGGCTCCAGCGATGG
TGGCTCTGGCGATGGCGCTGCTGCCAGCGCTGCTGCTGGTGATAGCGACT
CACCTCTTGCGTCGCTGCCGTCGCGGCTGTCGTCCGGACAGCAAGGTACT
GCCGATGGTCTTAGCAGAGGTGGAGGAGGGAGTGGAGGGGTGCCTTCGGC
GGCGGCGACAACGACGACGCTTTGCGACGTCTCTCTCCCCGTCGAGGGGT
CGATATCAGGGGGAAGTAACTCGTCCTCTTCTGCATCTTCTTCTCCGGCC
ACGGGCGCCGCCACCGTGGCCGCGGCCAGAGCCCCTGCCGTTGCCAGAGC
TGCATCCGCTGCGGGAACGGGAGGAGGAGGAGGACGAGAAGGAGCTGGGG
GTGGTCCCGTCCTTTTGCTGCAGCCGCCCCCTCCCTTCGACGTCGAGCCA
ATGCTTCAACAACGAGAGGTGGGCTCGTGGCCGCCGCGGGCGGGGGGCGC
CTGGGGGGGAGGTACAGCAAGGTCTGCGGCATGGGCTGCAGTGGAAATGG
GAGGAGGGAGATCGATCGGACTGAGAGACGATAACGGCCTGAACCCCTGG
AGAGAAAGCGTGAGCGGCCCAGCGTTTCACTCGCAGGGGGGCGGTGCCGG
CACCAGCGGCGGTGGCAGCGGCGGCGGCAGCGCCTTCCAGGAGGAGGCCG
GATGGGGCAGCGGACGGGAGTCAGGGTCGGGCCGCCGGGGGCATCCAGCG
GTCGGACTAGGCCCTCCAGTGGCCGGGAGATGATGATGACGGCCGCGCGG
TCTGTATCATAGGTGAGGAGCACTGCTGTGGAAAGGAGGGGGGCGGAACA
GGCGATAAAAGCTAAGAACTTGCGGGCGGTCACTGTCTGCAGATCTAGAC
TTCGGGTTGGGGGTTGTTGATCGCTATAGGTAGATTCACGTTTCTTGAAC
ACTCGTAAGCAGTCTATCCAGATGCGCTCAGTGCCAAACCAAGATGTTTG
GAGTTCCTCCCCTCCGGATCTGTGGTTGCACGATGGGCATGTTTACGGAT
TTATTCGGCAGGTAATGAAGACCCGACCCAAGGATGTCTGACGATAATAA
ACAGCGACATAGCGACATGGTTCTTGTTTTTGTTCTTGTTTTTGTTCTTG
TTGCTTGTTCTTGTTCTTTTCTTGTTCTTTTACTTGTCCTGCACTCGCCC
TGCAGCCCGACTGTTCGTTCAAGAGCGTGTTGTTCGCCTTCTTTGAGTAG
CGAAATACGTTGCAGCGAAACGAACGTCTTGTCCTGTTTCTGTTTTTGCC
TGTCGGCGGTATTTGGGCGGCAATTTGAAGCAGCAGGAGGCTGTCATCAG
CGCAACGCTGGGAAGGGTTGGGGCGGGGGCGGGGCAAGCTCGTGCTGCAG
CTAAAATGGAGAACCAACACTTTTCACGCAAGTCTGGCAGGAGTTTGCGG
CGCGTGGTGCACGCAACGTTGGGCCTGCCAAGAAGAGAGGCAGTTCGCAA
CGTGGAGGGGGCCAAATTAAAATGGAGTCGGACAGATGGCGCGCGCCGCG
GGTTGAAAATTGGCGTTTTTACACGCTGGTCGTACGATGTGTCTTGGGGG
CAGAGGGGAGATAGCAGTGCCACATGCCGGCTGGCGGTGTCATTCGTGTG
TACGACCGTCGGCAATCGCCTTTGCTATTTGTATAGCCGATGTTTCCAGA
GTCGCCTCCATCGACGAGGCTTTTTCCCTGGGGTGGCTGTGTGGTATGAG
TTGAGGATTTCGCTTTCACCACACACAGTCCGTAGGTCACGTGTGGGAGT
GTTAAAGGAGTTTGAGGGCCGGCGAGGGGGTAAATACTCGTGAGGCCGTT
TCATGAAAATAGTACGAACAGGGTCGTGCTTGGTGGTTCAACAGGGATGG
GGAGTCGGTGAACGATGTGTTCGTATCTGCTGGTATGATCCTACCGGCGG
GATTGTGCGTTGTAAATGGGGGCCATGTGTCCGATCGGTTTCCCTCCCCT
GGCGTGCGATTTTGTTGGGTGTGCTCGAGACGATAGCGGGGAAAGGTAGC
CAAGCCTCCCCGTTTTTCGTCTTTGATATCATAGTTTGTGTTTTTAGTAA
CCCTTCGTACACGCGTAGTGATAAAAGGTCGAGTCGAATCAGCAGAGATT
TTGCAGACGTGATCGGGTGACGTGTCGTATCATCCAGCAAACAGCGGTGA
GTACCCTGATATGCTTGGCTTTGCAAGCGTGCATAACCGCTTCGGTTTTC
TCGCTGTTGAAACGCAAATCATAGGAACACAGGTGCCACCTACACATGCC
TCATGTTCCCGCAGGGTGCATGACTGTTGTATTTTGTTTGTGGCGGG

Coding sequence (CDS) from alignment at P-littoralis_Contig10:1054164..1063910+

>mRNA_P-littoralis_Contig10.293.4 ID=mRNA_P-littoralis_Contig10.293.4|Name=mRNA_P-littoralis_Contig10.293.4|organism=Pylaiella littoralis U1_48|type=CDS|length=3069bp|location=Sequence derived from alignment at P-littoralis_Contig10:1054164..1063910+ (Pylaiella littoralis U1_48)
ATGAAAAAGCGGCCACGTGCGGAGGAAGGGGCGACGACGCCATCAGAGGA
GCAGGAGGAGGAAGAGGAGGAAGAGGAGGATCACACCATGAATGACTCCC
CGACGTCCAACGACACATCTGATGACGGCAGAGAGGAGATGATAGGTGGA
GTGGAAGATGGAGAACCACCCCGCACTTGCGTGTCCTGTCGAAAGAGCAA
GGTCAAGTGCTCCAAAGTCAAGTGCTCCAAAGGTTTACCGTGCAACAGGT
GCAGACGACTGAAGCTCACCTGCGTAGCCCAAGTGAGGGGGCGAGGCCGT
CCGGTTGCGAGCACGACAGCTGCCAAGAAAAGCCCCAAGTCGAAGCACCT
GAGGCCGGAGGTCCAGAGCAGCGAGAATGGCGTCGGTGCCGGCCGTGTCG
GTGGCAGGCGCGGCGGGAGAGCGGGGACAACGAAAGGAGGAGAGGCTAAA
AGCAGTTTTCCTGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAGCTT
TCCGGTGCGGGGCGGGGCGGCGGGGGCACCAGGGGCTTCTGGAGTAGGTA
TAATGTCTTCGGCTCGTCTTCCTTCCCGGGCACGGGAGGGCCCCGCCGTC
AACACGGCGGTGAAACTGACATCAACGCTGCCAGCGGCGGCAGCGGCGAT
CGTTGCCGCTGATCGCGACAGCAGCAGCGATGTAATTACTGCGTGTAGGA
CCGAAGGTGGTGGCGTTGGCAGCAGTTTTGGCAGCAGGCTTCCCCTCGGG
CTCTCCTTGTCCTCCTCGGACGAGGTTCCTCCGCCTCTCGCCGCTGTCGC
TCTTCAAACCGCCATGAGTTGCCCGGTCCCATTTGGGTACAACGGCCCTG
TTCCCGGCGGTCCTGGCCTAGGCAATGTTGATGCTGCGTACGCACAGCAA
CATCTCGACGCTTCGTCTCATTCATGCCCACCACACCTCATGTCGGCGGG
GCACCAAGTGTCTTCAGCAGCAGCAGAGCAGCAGCCACAGCAGCAGCAGG
AGCAGCAGAATATGTACGCAAGTTTGAGGGGCAGCGATTATGGGGGCGCG
AGGCATAATAATCCCGCAAGAGGTGGCTCCATCAGCGGCTCCGGCAGCAG
CTCCTGGCGAGCTGTTTACGATAACGGCGTTTGTTCCGCCGGTGGTGCTT
CAGTTCCAAACGGTACTTGGCTTAGCGGGATGGAAGACGACATCAAGAAC
GACACCAACACCCACATCAACGCCGTCAACGGCCAACAGCAGTGGGAAGC
AATCAGCGCTCCTTTGGCCACTTCAGCAGCAATGGTCAACGGCATCAGCA
ATGTGGACACGGGAGGTCTGCTCTCCCCCCCCACCCGTCACCACAGGGCG
AACGACGGGCGCGATGGGGGCTTCAAGAGCTTCAACGGAAGGAGTTTCTC
GTGGGCGGAGACGATGGGCGACTCCAAGGACGGTGCGGCTGCCGCCGACG
CCGACGCCGAAGACTTTTTGTCGTCGAAATCGCCAGACACACAGGCGCCC
TGGCTCATGGGTCTTCCACGGGACGCTGGTGATGGTTCTGACGCGGGGGA
GGTGTTGCCACAAGTCAACGAAGGTGGCGTGGAACCGACCGATGTCATCA
CGAAGGTCTTCTGGAAGCTCTTTGACAACAAGGAGGTCAATCGCCCGAAA
GCGATCATTGTCATCCGGCATTGGGCGCTGCTCGCCCGCGAAAGGCGAAG
CACGCAACTCATGCACAAGACCGTCAACATGGCCAGGGCGCTGCGCATCA
ATGTGGCCGAAATCTTGAACGACTACGGCATTTACGCGATGTTTCATGAG
CTGCTGCGAGAGGCCGAGGCCGGGAACACGGTCGAGCCGGCGCGTTCCGT
GAATCCGAGGCGCGTCGAAGCCTCGCCTTACATTCAGGAGCTGCTGTCGC
CGTTCGCGGCCGTGTCGATGCGCGTGGTGCTGCGCGGGCAGAGCTGCTTC
TACCACAACGACGTGTGCGCCCGCCTCTTCTTGAGCACGGAGGAGGCTAA
CGAGCTGTACGCCACCAAAAACAAGGACGTGTGGGCGTCTTTTATTCACC
CGGACGACCACCAGGCGTTCTTCGATTGCATTTCGATGCAGCTCTTCTTT
TCGCCCGGGCACCAGTCCGAGTTCAAGGAAATCTTAAAGTGTCGGTACAA
GACGGGCGTGGTGTCCCTAGCCCTGGTCCACTTTCGTTGCGAGTTCCTAG
ACGAGGGTAACTACGCAGCTTTCGGGCTCAGCGTTCTCCCCTTGCCGAAG
TCGGATTACATGCGTAACGTCGAGCTGGAGCCGGCAGCTGCAAACGCGCA
CGCCGGCGCTGGCGCCGGCGCTGGCTCCAGCGATGGTGGCTCTGGCGATG
GCGCTGCTGCCAGCGCTGCTGCTGGTGATAGCGACTCACCTCTTGCGTCG
CTGCCGTCGCGGCTGTCGTCCGGACAGCAAGGTACTGCCGATGGTCTTAG
CAGAGGTGGAGGAGGGAGTGGAGGGGTGCCTTCGGCGGCGGCGACAACGA
CGACGCTTTGCGACGTCTCTCTCCCCGTCGAGGGGTCGATATCAGGGGGA
AGTAACTCGTCCTCTTCTGCATCTTCTTCTCCGGCCACGGGCGCCGCCAC
CGTGGCCGCGGCCAGAGCCCCTGCCGTTGCCAGAGCTGCATCCGCTGCGG
GAACGGGAGGAGGAGGAGGACGAGAAGGAGCTGGGGGTGGTCCCGTCCTT
TTGCTGCAGCCGCCCCCTCCCTTCGACGTCGAGCCAATGCTTCAACAACG
AGAGGTGGGCTCGTGGCCGCCGCGGGCGGGGGGCGCCTGGGGGGGAGGTA
CAGCAAGGTCTGCGGCATGGGCTGCAGTGGAAATGGGAGGAGGGAGATCG
ATCGGACTGAGAGACGATAACGGCCTGAACCCCTGGAGAGAAAGCGTGAG
CGGCCCAGCGTTTCACTCGCAGGGGGGCGGTGCCGGCACCAGCGGCGGTG
GCAGCGGCGGCGGCAGCGCCTTCCAGGAGGAGGCCGGATGGGGCAGCGGA
CGGGAGTCAGGGTCGGGCCGCCGGGGGCATCCAGCGGTCGGACTAGGCCC
TCCAGTGGCCGGGAGATGA