mRNA_P-littoralis_Contig10.28.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: D7FQB2_ECTSI (Similar to ATP binding / alanine-tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB2_ECTSI) HSP 1 Score: 322 bits (824), Expect = 2.480e-104 Identity = 177/290 (61.03%), Postives = 203/290 (70.00%), Query Frame = 1
Query: 289 VYMLDTYLMVYEAKVLGVVEDETQGPAVILDKTIFHPQGGGQPSDEGNIVCGPSAMKVHKVRDVGGGVIHHYYGAISGSSFRPPETGQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKVVTADVVTVTKIVDQVKSKAHDNGAAPSPEERAGEGXXXXXXXXXXXV---------------------DKYGAATRIVEVAGLSCPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSLVSPRSS 1095
+Y+ DTYLM EA VLGVVED++QG A+ILD+TIFHPQGGGQPSDEG I CG + V KVRDVGG VI+HY G +SG+ E G+PASLALDSAKRLRHAALHSAGHAVD+AVV AVG GVFSPLKGYHFDDSPYVEYRG LP GL+K+AFIE+ N ELDK+V A++ T+ K+ DQ + ++ S +E G V KYGAATR V VAGLSCPCGGTHV STRE+EGVR TKVKAKKG LRVSY+L SS
Sbjct: 1 MYLQDTYLMTSEATVLGVVEDDSQGSAIILDRTIFHPQGGGQPSDEGTITCGDCTVPVSKVRDVGG-VIYHY-GTMSGTPQPRLEAGRPASLALDSAKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGTLPAGLEKDAFIEKCNSELDKLVMANMETMVKMADQEHGDEAPSSSSSSAQEGPSRGAAGRGREEVTVVAERGGRGGRGKVPASSTAAAATKYGAATRTVTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTLAPSSSS 288
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: A0A7S1TVS7_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS7_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.990e-44 Identity = 115/281 (40.93%), Postives = 152/281 (54.09%), Query Frame = 1
Query: 280 TERVYMLDTYLMVYEAKVLGVV-------EDETQGPAVILDKTIFHPQGGGQPSDEGNIVCGPSAMKVHKVRDVGGGVIHHYYGAISGSSFRPPET---GQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKVVTADVVTVTKIVDQVKSKAHDNGAAPSPEERAGEGXXXXXXXXXXXVDKYGAAT-RIVEVAGL-SCPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSLVSP 1086
TER+Y+LDTYL +A L V +D T AVILD+T+FH QGGGQP+D G I + +V VR G V H++G+ G P G L++D KR+ HA HSAGHA+D AV G + KGYHF D PYVEY GKL + KE ++ LN ++ +V++ D+ T + ++KA A +P+ A T R+V VAG +CPCGGTHV ST EL GV TKVK+KKG ++VSYS+ P
Sbjct: 28 TERLYLLDTYLFEADAAALSVEALEPNPKDDATH--AVILDRTVFHAQGGGQPADLGTITADGAVFEVTGVRSAGDAV--HHFGSFRGGDGDAPAAFAAGAAVHLSVDEVKRVAHARCHSAGHALDVAVARIFGEDWVAG-KGYHFLDGPYVEYIGKLAPEM-KETIVDTLNEKIAEVLSEDIPTEVLYLSPEEAKA----ACGTPD---------------ADFSHITAPTIRVVTVAGGGTCPCGGTHVRSTAELGGVTVTKVKSKKGRIKVSYSVTPP 283
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: A0A835Z9X7_9STRA (Alanyl-tRNA editing protein AlaX-M-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X7_9STRA) HSP 1 Score: 163 bits (413), Expect = 5.470e-44 Identity = 104/267 (38.95%), Postives = 139/267 (52.06%), Query Frame = 1
Query: 280 TERVYMLDTYLMVYEAKVLGVVEDETQGPAVILDKTIFHPQGGGQPSDEGNI-VCGPSAMKVHKVRDVGGGVIHHYYGAISGSSFRPPETGQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKVVTADVVTVTKIVDQVKSKAHDNGAAPSPEERAGEGXXXXXXXXXXXVDKYGAATRIVEVAGLSCPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSL 1077
TER+Y+ DTY A+V+ V +D AV+LD+T+FHPQGGGQP+D G + + A V V+ G VI H+ G + +TG ++D +RL+ A LHSAGHA+D AV A G P KGYHF+D PYVEY G L D+ +++LN EL ++ A + T + + A R+V V G +CPCGGTHV ST EL G+R TK KAK G LRVSY++
Sbjct: 4 TERLYLQDTYSHACSARVVEVRDD-----AVVLDRTVFHPQGGGQPTDRGTLKIHNEVAFVVANVK-ADGDVILHF--GQHGEGDKKLQTGDEVEASIDLQRRLQLARLHSAGHALDAAVRNA-GFAALKPTKGYHFEDGPYVEYEGALSAD-DRATLVDKLNAELALLIEAAIETAVR--------------------------------------QSEAGLRVVSVGGCACPCGGTHVRSTAELRGLRVTKAKAKSGRLRVSYTI 222
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: A0A2D9ITL3_9FLAO (AA_TRNA_LIGASE_II_ALA domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D9ITL3_9FLAO) HSP 1 Score: 156 bits (395), Expect = 3.330e-41 Identity = 102/267 (38.20%), Postives = 141/267 (52.81%), Query Frame = 1
Query: 280 TERVYMLDTYLMVYEAKVLGVVEDETQGPAVILDKTIFHPQGGGQPSDEGNIVCGPSAMKVHKVRDVGGGVIHHYYGAISGSSFRPPETGQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKVVTADVVTVTKIVDQVKSKAHDNGAAPSPEERAGEGXXXXXXXXXXXVDKYGAATRIVEVAGLS-CPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSL 1077
TE +Y+ DTYL EA+ ++ D+ G A++LDKTIF+PQGGGQPSD G IVC +V KVR G++ HY SG G L +D+ KRL HA +HSAGH +D AV ++G SP KG+HF + PYVEY G L D ++I L +++++V D+ G S E+ A +G G + R+V G C CGGTHV ST+E+ + K+K KKG R++Y+L
Sbjct: 2 TELIYLQDTYLSTLEARAQELICDDF-GEALVLDKTIFYPQGGGQPSDSGEIVCDTFVFEVSKVRLTNDGLVMHYGEFSSGGWVE----GLAVELKIDAVKRLVHAKVHSAGHLLDCAV-SSLGLNQLSPTKGFHFPEGPYVEYEGILE---DSSSWIAPLEKKINELVLQDLEI--------------QGYLLSAEQAANQGVWAPE----------GKSARVVSFDGFQGCGCGGTHVSSTKEIGELIIRKIKVKKGVTRIAYAL 235
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: A0A6H5JDI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI3_9PHAE) HSP 1 Score: 149 bits (377), Expect = 4.380e-40 Identity = 72/96 (75.00%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 547 GQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKVVTADVVTVTKIVDQVKS 834
G+P SLALDSAKRLRHA LHSAGHAVD+AV AVG GVFSPLKGYHFDDSPYVEYRG LP GL+K+AFIE+ N ELDK+V A++ TV K+ DQV++
Sbjct: 12 GRPVSLALDSAKRLRHAVLHSAGHAVDKAVAGAVGAGVFSPLKGYHFDDSPYVEYRGTLPAGLEKDAFIEKCNSELDKLVVANMETVVKMADQVRA 107
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: A0A7S2G7E6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G7E6_9EUKA) HSP 1 Score: 150 bits (379), Expect = 1.570e-38 Identity = 103/274 (37.59%), Postives = 140/274 (51.09%), Query Frame = 1
Query: 274 PPTERVYMLDTYLMVYEAKVLGVVED-ETQGPAVILDKTIFHPQGGGQPSDEGNI-VC-GPSAMKVHKVRDVGGGVIHHYYGAISGSSFRPPETGQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKVVTADVVTVTKIVDQVKSKAHDNGAAPSPEERA--GEGXXXXXXXXXXXVDKYGAATRIVEVAGLSCPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSLV 1080
PPTE +Y DTYL A VL + D + G +V LD+T FHPQGGGQP+D+G I C G V V GV+ H G + G + +D A R ++A +HSAGH +D A+ A P KGYHF YVEY GKL E +++A + +L +D+++ + T VD + H A PE+RA G+G R+V V G CPCGGTHV T+EL+GV+ VK+K R+SYS++
Sbjct: 18 PPTEALYQTDTYLFTASATVLAIGPDAKGTGWSVKLDRTCFHPQGGGQPADQGTISACEGGGTFAVSMVSKDKAGVVSH-----DGPEEPSLKVGDSVTCTVDEASRRKNARVHSAGHLIDVAMTNAKCN--LRPTKGYHFTPGSYVEYDGKL-EAAERDALLPKLQASMDELIGQALPTKVLTVDASELGQHCPPNA-LPEDRALWGKGW-----------------VRVVSVGGQGCPCGGTHVYDTKELKGVKVEAVKSKGKITRISYSMI 265
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: A0A4D9CZR6_9STRA (AA_TRNA_LIGASE_II_ALA domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZR6_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.490e-37 Identity = 108/295 (36.61%), Postives = 152/295 (51.53%), Query Frame = 1
Query: 271 FPPTERVYMLDTYLMVYEAKVLGV--VEDETQGPA-------VILDKTIFHPQGGGQPSDEGNIVCGPSAMK--VHKVRDVGGGVIHHYYGAIS--------GSSFRPPETGQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGL-DKEAFIERLNGELDKVVTADVVTVTKIVDQVKSKAHD------NGAAPSPEERAGEGXXXXXXXXXXXVDKYGAATRIVEVAGLSCPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSL 1077
+P T+R Y+ DTYL + +L V V +T + ++ +T+FHPQGGGQPSD G +V G + + V VR VG I ++YG G+ P G+ L +D+A+R HA LHSAGHA+D AV+ +G + P KGYHF+D P VEY+GKLP E IE L ++ +++ D+ T ++ K++A N A PEE A R+V V G CPCGGTHV ST+EL GV T++K KK ++SY +
Sbjct: 6 YPTTQRRYLNDTYLYDISSTILAVEPVPPDTSAGSNKMPYFGLVTAETVFHPQGGGQPSDVGRVV-GENGVTFFVDNVR-VGENAIIYHYGIFKHEMSENEDGARCVPFRAGEKVKLEIDAARRRLHARLHSAGHALDVAVLR-LGLEL-RPTKGYHFEDHPSVEYQGKLPADKGSSERLIEALTLKIQELIEEDIAT--ELYSTSKAEAASMLSGGVNDVAHFPEE---------------------AQVRLVSVGGNICPCGGTHVKSTKELGGVEITRIKTKKNVTKISYRI 273
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: A0A7S2WSC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSC3_9STRA) HSP 1 Score: 147 bits (371), Expect = 5.160e-37 Identity = 100/268 (37.31%), Postives = 137/268 (51.12%), Query Frame = 1
Query: 280 TERVYMLDTYLMVYEAKVLGVVEDETQGPA-VILDKTIFHPQGGGQPSDEGNIVCGPSAMKVHKVR-DVGGGVIHHYYGAISGSSFRPPETGQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKVVTADVVTVTKIVDQVKSKAHDNGAAPSPEERAGEGXXXXXXXXXXXVDKYGAATRIVEVAGLSCPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSL 1077
T ++Y+ DTY A V+ V G VILDKT+FHPQGGGQP+D+G + +V V+ D G++ H+ SGS E G +D R + LHSAGHA+D A+ +G+ +P KGYHF D+PYVEY G L +K++ ERL EL ++ V + + + GA S + GA R+V V G CPCGGTHVG+ ELE V T++KAKKG ++VSY +
Sbjct: 48 TNKLYLADTYRTETPAVVVEVEPVPESGDLKVILDKTVFHPQGGGQPADKGVLSFPGGEFRVSMVKEDRSTGLVFHFGSMGSGSGSL--EAGTEVDARIDPEWRSVCSRLHSAGHAMDAAMTALAVSGL-TPTKGYHFPDAPYVEYAGTLA-AEEKDSLQERLTNELQSIIEKQVPSKVVYLSAPEVLELCPGANVS-------------------IFPEGAMIRVVNVGGCWCPCGGTHVGNASELERVTVTRIKAKKGTVKVSYEV 292
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: L8GVN5_ACACA (Threonine/alanine tRNA ligase subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVN5_ACACA) HSP 1 Score: 144 bits (362), Expect = 4.380e-36 Identity = 107/287 (37.28%), Postives = 150/287 (52.26%), Query Frame = 1
Query: 280 TERVYMLDTYLMVYEAKVLGVVEDET-QGPA-------VILDKTIFHPQGGGQPSDEGNIVCGPSAMK--VHKVR-DVGGGVIHHYYG-AISGSSFRPPETGQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKV------VTADVVTVTKIVDQVKSKAHDNGAAPSPEERAGEGXXXXXXXXXXXVDKYGAATRIVEV-AGLSCPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSLVS 1083
TE+ Y DTY A V+ V E +G A V+LD+TIFHPQGGGQP D G +V + +K V +VR + GVI H A +G++F + G L +D AKR HA LHSAGH +D+AV P KGYHF D+PYVEY+G +++ ++RL E +++ VT VV + V+++ A D+GA P+ R+V V A L CPCGGTHV +T E+ + K+ AKKG +R+SY+L++
Sbjct: 6 TEQAYWEDTYRFRDTAHVVQVAEHPPPRGSAAGASYFAVVLDRTIFHPQGGGQPFDTG-VVASAAGVKFTVSEVRANREDGVIQHIGTFAEAGTTF---QAGDEVELQIDEAKRRLHARLHSAGHLLDKAVANLFPEYNLIPDKGYHFADAPYVEYKGTFVPADKRQSALKRLEDECNRLIAEGSEVTVQVVHSKEEVERLCGSASDSGANPT------------------------EPVRVVTVCAPLGCPCGGTHVQNTGEIGRIAIPKMSAKKGVVRISYTLLA 264
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Match: A0A7S3Z8T4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8T4_9EUKA) HSP 1 Score: 140 bits (354), Expect = 6.790e-35 Identity = 98/272 (36.03%), Postives = 139/272 (51.10%), Query Frame = 1
Query: 274 PPTERVYMLDTYLMVYEAKVLGVVEDETQGPAVILDKTIFHPQGGGQPSDEGNIVCGPSAMKVHKVRDVG--GGVIHHYYGAISGSSFRPPETGQPASLALDSAKRLRHAALHSAGHAVDRAVVEAVGTGVFSPLKGYHFDDSPYVEYRGKLPEGLDKEAFIERLNGELDKVVTADVVTVTKIVDQVKSKAHDNGAAPSPEERAGEGXXXXXXXXXXXVDKYGAATRIVEVAGLS--CPCGGTHVGSTRELEGVRATKVKAKKGALRVSYSL 1077
P T +YM DTY EAKV+ +V E Q VI D+TIFHPQGGGQPSDEG + G + +V KV G ++H G SFR G S ++ KR+ HA +HSAGH +D A+ + +G P KGYH+ YVEY GK+ + +++A + +L +D+++ +D+ T ++ + + R V VAG+ CPCGGTHV ST E++ +R TK+K K RVSYS+
Sbjct: 45 PSTNPLYMDDTYRNKAEAKVIQIVSGE-QESIVITDQTIFHPQGGGQPSDEGTMTVGSNNFEVKKVTKAKETGAILHA--GVFRRGSFRE---GDVVSQEVNMTKRIFHARIHSAGHLLDVAMAK-IGEQR-KPGKGYHYPQGAYVEYIGKI-DVKERDAIVTKLQAAIDELIKSDIATKVELKNNI---------------------------------------RHVSVAGVEEGCPCGGTHVRSTGEIKSMRVTKLKNNKKNARVSYSV 268 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.28.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.28.3 >prot_P-littoralis_Contig10.28.3 ID=prot_P-littoralis_Contig10.28.3|Name=mRNA_P-littoralis_Contig10.28.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=340bp MSSGSRLTVAKTARYSVFQQHGAASLASQHTPKKQTPKILVGVNYDKEGSback to top mRNA from alignment at P-littoralis_Contig10:166081..171189- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.28.3 ID=mRNA_P-littoralis_Contig10.28.3|Name=mRNA_P-littoralis_Contig10.28.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5109bp|location=Sequence derived from alignment at P-littoralis_Contig10:166081..171189- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:166081..171189- >mRNA_P-littoralis_Contig10.28.3 ID=mRNA_P-littoralis_Contig10.28.3|Name=mRNA_P-littoralis_Contig10.28.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1020bp|location=Sequence derived from alignment at P-littoralis_Contig10:166081..171189- (Pylaiella littoralis U1_48)back to top |