Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1251 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 672 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789326.032372-UTR-P-littoralis_Contig10:939800..940090 | 1680789326.032372-UTR-P-littoralis_Contig10:939800..940090 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig10 939801..940090 - |
| 1680789326.0496976-UTR-P-littoralis_Contig10:940762..941051 | 1680789326.0496976-UTR-P-littoralis_Contig10:940762..941051 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig10 940763..941051 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789326.041412-CDS-P-littoralis_Contig10:940090..940762 | 1680789326.041412-CDS-P-littoralis_Contig10:940090..940762 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig10 940091..940762 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.257.1 >prot_P-littoralis_Contig10.257.1 ID=prot_P-littoralis_Contig10.257.1|Name=mRNA_P-littoralis_Contig10.257.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=224bp
MSALVVTLLRLSSRPPTGGTLYVKSGGFLDREEAGRAEEKTQRGCKNLCL
RVLFYRERKKCSLQAVRRSCAFRMTCPPPHWYIFRPAGDRLCVCVCVCVV
ISSILDAGQSAHILACVGASVGGDRRQEGQHVAGVSVFFSPVFLLVCGAL
RPFIPFFPRGGLGRLFRFTSALTFHNWNFVSSQTTQSLSTALAFVEVGVF
DGKELPQWVSKHFIAAIFTWYTL* back to topmRNA from alignment at P-littoralis_Contig10:939801..941051- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig10.257.1 ID=mRNA_P-littoralis_Contig10.257.1|Name=mRNA_P-littoralis_Contig10.257.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1251bp|location=Sequence derived from alignment at P-littoralis_Contig10:939801..941051- (Pylaiella littoralis U1_48)
ACGGGCATTTGTAGTCGAGGAGAGAAGAGAGGAGAGGAGAAGAGAGGAAA
GGAAATTTACGGTATTTGTATCTTCTTTTTTTTTAACCGGCTATCATACA
CAAGTACGTGTGGTGGATTGGTGTTTGTGCGGTCGAATGTCAGGCGGCCG
ATTTATCCCGCAGTGAGCAGCCCGGGCGGTGGCGTTGGATGCTTCTGGTG
GTCAGTTTTTTTTTTGTTCTTTATTTGCGGCAGGAGCCGGCCTGAGCAGG
CGGCTGCACCCGCACGATGATGTCGCTGTTTTGTGGTAAATGTCTGCTCT
AGTGGTGACGCTCTTGCGGCTGTCCTCCAGGCCGCCCACGGGGGGCACGT
TGTATGTAAAATCGGGGGGATTCCTCGACAGGGAAGAAGCAGGGAGGGCG
GAGGAGAAGACACAACGGGGTTGTAAAAATTTGTGCTTGCGGGTATTATT
TTACAGAGAGAGGAAGAAATGTTCATTACAGGCAGTACGCAGAAGCTGCG
CCTTTCGTATGACATGCCCCCCTCCGCACTGGTATATATTTCGTCCAGCT
GGGGACAGGTTGTGTGTGTGTGTGTGTGTGTGTGTCGTCATCTCATCTAT
TCTGGACGCCGGCCAGTCTGCACACATTTTGGCGTGTGTGGGCGCGTCGG
TCGGGGGTGACAGAAGACAGGAAGGTCAACATGTGGCAGGAGTATCTGTT
TTTTTCTCTCCAGTTTTCCTTCTTGTGTGCGGTGCATTGCGGCCTTTTAT
ACCTTTTTTCCCGCGGGGAGGGCTTGGCCGTCTCTTTCGTTTCACGAGCG
CATTGACTTTTCACAATTGGAATTTCGTTAGCTCACAAACGACACAATCG
CTTTCCACCGCTTTAGCCTTCGTAGAGGTGGGCGTTTTCGATGGGAAAGA
ATTGCCGCAATGGGTCAGCAAGCACTTTATTGCTGCAATTTTTACCTGGT
ACACGCTATGATATACTTCGTACCTTTTTTTGTCGTCGATGTTGGTGTTG
GTGTAGGTGTTGGTGTTGGGGAAAGAAGCAAGCGCTCCGAGTGGTGGGTA
AAGGGGGACGCGTCGGGCGGTTAGGTCACGGTCGACGGAAAAAAAACTGT
GGTGGTGACAGGCAAAAATATGATAGCAGCAGTATTGAAACATGGTCTTA
CGTAGCCGTTCAGGCTTTTGCCTGTCTGTTAATATGGACAAAAGAGAGAG
AGAAATACATCAAATTCCCGCACTTTGGCCGATCAGAAATTAGCGGCGCC
G back to topCoding sequence (CDS) from alignment at P-littoralis_Contig10:939801..941051- >mRNA_P-littoralis_Contig10.257.1 ID=mRNA_P-littoralis_Contig10.257.1|Name=mRNA_P-littoralis_Contig10.257.1|organism=Pylaiella littoralis U1_48|type=CDS|length=672bp|location=Sequence derived from alignment at P-littoralis_Contig10:939801..941051- (Pylaiella littoralis U1_48)
ATGTCTGCTCTAGTGGTGACGCTCTTGCGGCTGTCCTCCAGGCCGCCCAC
GGGGGGCACGTTGTATGTAAAATCGGGGGGATTCCTCGACAGGGAAGAAG
CAGGGAGGGCGGAGGAGAAGACACAACGGGGTTGTAAAAATTTGTGCTTG
CGGGTATTATTTTACAGAGAGAGGAAGAAATGTTCATTACAGGCAGTACG
CAGAAGCTGCGCCTTTCGTATGACATGCCCCCCTCCGCACTGGTATATAT
TTCGTCCAGCTGGGGACAGGTTGTGTGTGTGTGTGTGTGTGTGTGTCGTC
ATCTCATCTATTCTGGACGCCGGCCAGTCTGCACACATTTTGGCGTGTGT
GGGCGCGTCGGTCGGGGGTGACAGAAGACAGGAAGGTCAACATGTGGCAG
GAGTATCTGTTTTTTTCTCTCCAGTTTTCCTTCTTGTGTGCGGTGCATTG
CGGCCTTTTATACCTTTTTTCCCGCGGGGAGGGCTTGGCCGTCTCTTTCG
TTTCACGAGCGCATTGACTTTTCACAATTGGAATTTCGTTAGCTCACAAA
CGACACAATCGCTTTCCACCGCTTTAGCCTTCGTAGAGGTGGGCGTTTTC
GATGGGAAAGAATTGCCGCAATGGGTCAGCAAGCACTTTATTGCTGCAAT
TTTTACCTGGTACACGCTATGA back to top
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