mRNA_P-littoralis_Contig10.241.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: D7FVN2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN2_ECTSI) HSP 1 Score: 380 bits (975), Expect = 2.420e-126 Identity = 196/247 (79.35%), Postives = 221/247 (89.47%), Query Frame = 1
Query: 190 ATAVTSQHHGRATLTMGAAGKKRKKLEKEALKYADGINKNAAREVQRDADIVAERLLQTCAEPKRDLAKIAVDIADLRSKTSSLKPAQSYDLSKDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCKSTGSSSLNIRYTSMIDGTGKQTGGSQSGEQDRVVDVDVAFVGQKALVLESVAAKSKKAVSLVFAQEPDLQGELTKLRVAADTKD 930
A+A++ Q ATLTMGAAGKKRKK+EK+ALKYADGINKN ARE Q++AD++AERLL+TCAEPKRDL KIA +IADLRS+TS+LKPAQSY+L KDWRLVFAS+DDAIS VGTGLHKLPLTR+QDFF+TL G S T R I IEVLRV+GPFPNLRNTLSG CKSTG+ SLNIRYTSMIDGTGK+TGGSQ+GEQDRVVDVDVAFVGQ LVLESV+AKSKK +SLVFA+EPDL+GEL KLRVA D KD
Sbjct: 5 ASAISEQRDRCATLTMGAAGKKRKKMEKDALKYADGINKNVARETQKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFITLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGGCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAKEPDLEGELAKLRVAGDKKD 251
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A835YNB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB0_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.530e-42 Identity = 103/233 (44.21%), Postives = 144/233 (61.80%), Query Frame = 1
Query: 217 GRATLTMGAAGKKRKKLEKEALKYADGINKNAAREVQRDADIVAERLLQTCAEPKRDLAKIAVDIADLRSKTSSLKPAQSYDLSKDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCKSTGSSSLNIRYTSMIDGTGKQ-TGGSQSGEQDRVVDVDVAFVGQKALVLESVAAKSKKAVSLVFAQEPDLQGELTKLRV 912
GR + GKK++ LE + DG + + E+++ D +A +LL C RD A I DL SK ++KPAQS +LSKDWRLV+ S+ D + +G+GLHKLPLTR++D F++ G+ R+I EVLRV+GPFPN++N LSG KS G+S L I YTSMIDGTGK+ T G+ + D V ++V FVG +V A + V +V+ +E DL+G L +LRV
Sbjct: 42 GRTVTSTVLCGKKKRALEVDE----DGTVQQSKAELKK-LDELAAQLLNLCTTNARDTAAIQAQARDLGSK--AVKPAQSAELSKDWRLVYVSSGDVLGALGSGLHKLPLTRMEDQFVSFAGSRGLGREITTTEVLRVIGPFPNVKNVLSGTYKSMGTSELLINYTSMIDGTGKEITSGNAA--MDGNVSIEVVFVGSDIMVTAPRDASGARQV-MVYQREEDLEGALKRLRV 264
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A7S2UVC0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC0_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.510e-41 Identity = 89/197 (45.18%), Postives = 130/197 (65.99%), Query Frame = 1
Query: 322 VQRDADIVAERLLQTCAEPKRDLAKIAVDIADLRSKTSSLKPAQSYDLSKDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCKSTGSSSLNIRYTSMIDGTGKQTGGSQSGEQDRVVDVDVAFVGQKALVLESVAAKSKKAVSLVFAQEPDLQGELTKLRV 912
V+++A IVA+ LL+ C KRD KI+ + +L+ T S+ PAQS +L DW +VF ++ DA+ VGTGL KLPLT+++ F++ G+ + R IEA E+LR++GPFPN++N LSG K+ G+ SL+I+Y MIDGTGK+ S S DR + ++V FVG+KALV +++ +V +E DL L KLRV
Sbjct: 77 VEQEAGIVADGLLELCTAEKRDTEKISSVVEELKKYTDSIMPAQSSNLRGDWEVVFVTDADALDHVGTGLRKLPLTKMEAMFLSFDGSRSVGRSIEASEILRILGPFPNVKNKLSGTYKAQGARSLSIKYDLMIDGTGKEVK-SGSATTDRSISINVEFVGEKALVATIPSSQH----IMVLKREVDLDEALRKLRV 268
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A7S3YGC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGC3_HETAK) HSP 1 Score: 112 bits (281), Expect = 1.060e-25 Identity = 66/149 (44.30%), Postives = 91/149 (61.07%), Query Frame = 1
Query: 472 DWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCK-STGSSSLNIRYTSMIDGTGKQTGGSQSGE-QDRVVDVDVAFVGQKALVLESVAAKSKKAVSLVFAQEPDLQGELTKLRV 912
DWRL + S + +GTGLHKLPLTR++D F++ +G+ R EVLRV+GPFPNLRN LSGD S+ + ++++YT MIDGTGK +SG DR ++ V + G LV+ +K +LVF +E +LQ L LRV
Sbjct: 1 DWRLAYVSAAAGLDEIGTGLHKLPLTRMEDLFLSFSGSKAAGRAAACTEVLRVLGPFPNLRNKLSGDFGISSSGTGISLKYTQMIDGTGKML---ESGNGMDRKNNLQVIYSGLDGLVM-----LTKTGCALVFQRETNLQAALKALRV 141
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A8J2STN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STN9_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.330e-23 Identity = 74/203 (36.45%), Postives = 112/203 (55.17%), Query Frame = 1
Query: 331 DADIVAERLLQTCAEPKRDLAKIAVDIADLRSKTSSLKPAQSYDLSKDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCKSTGSSSLNIRYTSMIDGTGKQTGGSQSGEQDRVVDVDVAFVGQKALVLESVAAKSKKAVS-LVFAQEPDLQGELTKLRVAADTKDKE 936
D D A ++L+ C E RD I + DL + + P + DWRLV+A +D+ + +GTGLH++PL ++D F++L + EV+RV+GPFPN++N L+G + G S+L + YT +IDGTG + SQ+ R V + +A + + LV VAA S A LVF +E D L +LRV +T + E
Sbjct: 73 DRDEKASKVLELCKEENRDFDAIDAAVKDLAALPAY--PDIGFRARGDWRLVWAKSDEGVGFIGTGLHRVPLANLEDQFLSLEADGSCA----LTEVIRVIGPFPNVKNLLTGT-STVGPSTLRLTYTKVIDGTGAELTSSQA----RSVKLRLAALSKSLLV---VAAASIDADDWLVFEREDDFADALERLRVPPNTPEDE 261
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A7S2KRS1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRS1_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.120e-22 Identity = 70/189 (37.04%), Postives = 107/189 (56.61%), Query Frame = 1
Query: 388 LAKIAVDIADLRSKTSS--LKPAQSYDLSKDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCKST---GSSSLNIRYTSMIDGTGKQTGGSQSGEQDRVVDVDVAFVGQKALVLESVA---------AKSKKAVSLVFAQEPDLQGELTKLRV 912
LA++ + D + +SS ++ S D+++V+A +D A+ VGTGLHK+PL R+Q+ F+ S +++E EV+R++GPFPN++N L G+ K + G S L Y+SMIDGTGK+ S +G + R VD+ V + +A+V + A LVF +E DL GEL LRV
Sbjct: 8 LARLRMLCTDFGTNSSSNNIRSITSRQEFLDYKMVWAGSDAAVCHVGTGLHKVPLARLQEVFL-----SIGKKRVEINEVIRILGPFPNVKNMLQGNVKVSVGGGESVLTFTYSSMIDGTGKEL--SAAGSEQRKVDLKVLYAADQAIVCTTSIDDDGAVDYFESDNGASLLVFFREKDLDGELDALRV 189
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A7S2I456_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I456_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.870e-20 Identity = 72/219 (32.88%), Postives = 116/219 (52.97%), Query Frame = 1
Query: 343 VAERLLQTCAEPKRDLAKIAVDIADLRSKTSS--------LKPAQSYDLSKDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCK---------STGSSSLNIRYTSMIDGTGKQTGGSQSGEQD--RVVDVDVAFVGQKALV--LESVAAKSKK-------AVSLVFAQEPDLQGELTKLRVA 915
V +++ P DL ++ I L KT+S L+ SK++R+V+ +D+A+ +GTGLHK+PL R+++ F+ L + ++ +EV+R++GPFPN+RNTL GD G + I Y SMIDGTGK+ +G++D ++VD+DV F K +V + V + K+ + L+F QE + +L KLR A
Sbjct: 186 VVDQIETLLESPNTDLNELLSLIRTLTDKTASQTGSIAGALRNLSISPQSKNYRMVWVGSDEAVCHIGTGLHKVPLARLEEVFLCLEK-----KTVQVLEVIRILGPFPNVRNTLMGDSSVIKPPGGTGEKGKTKFRIEYNSMIDGTGKEI---LAGKEDNVKIVDLDVLFADDKVMVCVVPPVEGEEKQDPLGENGSKVLLFFQEDYMNDKLEKLRAA 396
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A7S1VIR5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIR5_9STRA) HSP 1 Score: 102 bits (254), Expect = 9.100e-20 Identity = 67/172 (38.95%), Postives = 99/172 (57.56%), Query Frame = 1
Query: 436 SLKPAQSYDLSKDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCKS--TGSSSLN---IRYTSMIDGTGKQTGGSQSGEQDRVVDVDVAFVGQKALVL--------ESVAAKSKKAVSLVFAQEPDLQGELTKLRV 912
SL+P + D+RL +A +D+ + VGTGLHK+PL R+Q+ F++L G + +IE +EV+ ++GPFPN+RNTL GDC G S +++ SMIDGTG + SG + R V + + F + ALV ++ K V LVF +E DL G+L + RV
Sbjct: 240 SLRPLTTSKTKLDYRLAWAGSDETLCHVGTGLHKVPLARMQEVFLSLKGRN----EIEVLEVISILGPFPNVRNTLQGDCMDMKAGDGSFTEWTVKWESMIDGTGNEI---LSGGEARKVPLHMYFSDKNALVAVVPNDDNDSDPLGENGKNV-LVFVREKDLDGKLAENRV 403
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A1Z5JD44_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD44_FISSO) HSP 1 Score: 100 bits (250), Expect = 1.240e-19 Identity = 67/203 (33.00%), Postives = 116/203 (57.14%), Query Frame = 1
Query: 337 DIVAERLLQTCAEPKRDLAKIAVDIADLRSKTSSLKPAQSYDLS--KDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCKST---GSSSLNIRYTSMIDGTGKQTGGSQSGEQDRVVDVDV-AFVGQKALVLESVAA----KSKKAVSLVFAQEPDLQGELTKLRVA 915
DI +E +T + P I + +L +TSS Q + +D+RL + +DD+++ +GTGLHK+PL R+Q+ F++ G + L Q EV+R++GPFPN+RNTLSG +S+ G + N+++ SM+DGTGK+ +G+++ + V + + + +++ S + L+F +E DL+ +L LRVA
Sbjct: 146 DIKSENNKKTVSVPD-----ILALVRELTQQTSSSPLTQLVGTTQRRDYRLAWVGSDDSVTHIGTGLHKVPLARLQEVFLSFPGRNRVLLQ----EVIRILGPFPNVRNTLSGSSRSSTRDGVTEWNVQWESMVDGTGKEL---LAGKEENIKSVPLRVYYSDEMVIIASRPCDDPWQGNGENVLLFLREDDLENKLEALRVA 336
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Match: A0A7S2XKB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKB3_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.280e-19 Identity = 73/205 (35.61%), Postives = 111/205 (54.15%), Query Frame = 1
Query: 349 ERLLQTCAEPKRDLAKIA---VDIADLRSKTSSLKPAQSYDLSKDWRLVFASNDDAISTVGTGLHKLPLTRIQDFFMTLTGTSTTLRQIEAIEVLRVMGPFPNLRNTLSGDCKSTGSSSLNIRYTSMIDGTGKQTGGSQSGEQDRV--VDVDVAFVGQKALVLESVAAKSKKAVS------------LVFAQEPDLQGELTKLRV 912
E L +T + RDL I +++ L T L+ + + + D+R+ + +DDA+ VGTGLHK+PL R+QD FMT+ ++E EV+R++GPFPN+RNTLSGD + L Y M+DG GKQ ++G D V + +++ F A+V +V K KA L+F +EP+L+ +L LRV
Sbjct: 146 EALFET--QTNRDLDSILGKLKELSQLEGATRGLRVLAAGE-NVDYRMAWVGSDDAVCHVGTGLHKVPLARLQDVFMTVGKN-----RVEVFEVIRILGPFPNVRNTLSGDVAMS-KGQLQFSYDMMMDGLGKQL---EAGTDDNVRKLKLNILFADSNAIVA-TVPNKDAKATDVDDIMGENGANVLLFVREPELETKLEILRV 337 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.241.1 >prot_P-littoralis_Contig10.241.1 ID=prot_P-littoralis_Contig10.241.1|Name=mRNA_P-littoralis_Contig10.241.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=295bp MRCIRLHAAYIIPSVLRLASPIEGFIATGASRLQYGGSSRRAANSATAVTback to top mRNA from alignment at P-littoralis_Contig10:879995..883922+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.241.1 ID=mRNA_P-littoralis_Contig10.241.1|Name=mRNA_P-littoralis_Contig10.241.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3928bp|location=Sequence derived from alignment at P-littoralis_Contig10:879995..883922+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:879995..883922+ >mRNA_P-littoralis_Contig10.241.1 ID=mRNA_P-littoralis_Contig10.241.1|Name=mRNA_P-littoralis_Contig10.241.1|organism=Pylaiella littoralis U1_48|type=CDS|length=885bp|location=Sequence derived from alignment at P-littoralis_Contig10:879995..883922+ (Pylaiella littoralis U1_48)back to top |