mRNA_P-littoralis_Contig10.222.3 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: D8LRE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE7_ECTSI) HSP 1 Score: 893 bits (2307), Expect = 1.650e-301 Identity = 502/963 (52.13%), Postives = 622/963 (64.59%), Query Frame = 1 Query: 664 KVSLQNPQCPMVIESARRSAANVSRGAGAVEAREIVLDDATVLLHCKNGVAFNTMDDRYMQLLPAEVVAQLPFHFFKQNGASDKLLDMVRATDGDTQTFHRLLVARDQGQDMRNMHRYIRFATEQQAKERASRLDGQFTKWPSWKFKENTLLGTPSVAVLNTFYRAAYQQDKDNMLREIIGLGDGEFLNMDGTFKVAGKVTDASTCLFFIMGDDAKIHGYAAVKSESQEQLFRFLTGYRDRRARQGTVFELQWIFDDRCCRGAKDPTKYFGTRIFPSVQRAPLADAFHSIQNLAGATTSKGHPRKALFAKAIGSVVRSKHPPDVEAVVEYLMKGNKRMSRADAQHAAVSKRWSRYVRTVSRPAQQTIDELRSLVEMHARMDAEGRARGELPLLQPELPPGRRGPRGAQPVLKSMIGCLEKGCGQDPLDVD---------------------------------------------GMHIDLGTGPKTKLKMYNCKGGTGKNEAFHRGLNRALPGVTRLGPDVCDERVLPLVYRYNCERNRKLGRTSKQSTLCVWRERDANDAARGCLTAEPFPKAGARPDVSQEDLHLEPMGFAYASRLRKDRLESCRHAAMDIAGVSCAPVPPRPGTSGNPQLNSGINSRPRLLPLTAEAQAGGSGEGRAGXXGAAGGEMGGLVVPGTGAEVNGASGAVASL-------------------------------ASGVG---------------TSGTRLGGLGRGAAGGQAPENIGGARVRHMRRQTVESQLPLTPRTDPEIACWARAVAKVTADGVPPRQVHSKAVEEYNTQYYLQQYSPGVAQEALRGPTSTQQTEKRSREATQRMLGASLANQPSALSEGGSTAVSKPKKRRKRGDVAEAKQRVESCTPLTLAEVASVTDVLANAYLKAMRLATSGKVAEKRLRLSSYFQTNSLSVYTPPRDV*GGAAA 3279 K +NP C + + SAR+SA + G +A EIV DDA V HCKNGV+FNTMD RYMQLLPA VVA+LP+ FFKQNG S++LLDMV AT+GDT FHRLLVAR+QGQ++R+M RYIRFA E+QA+ER SRLDG+FTKWP W+F TL+ TPSVAVLNT +AA+ QD+D+MLRE+I GEF+N DGTF+ AGKV + + CL+F+MG+DAKI GY AVKSES+E+L Y DRR ++GT+ L+W++DDRCCR KD TKY+G +IFP V+RAPLAD+FH+ QNLAGATTSK H R+ ++A+ +G VRSK+ PDV+A+VEYLM+ NKRM+RA+A+ A SK SRYVRTVSRP ++TI E+ +V +HAR+DAEGR RGELPLLQPELPPG+RGPRGAQ L S+I CL KGCGQDPL VD M++ +GTG KTKLK Y KGGT KNE+FHR LN V+RLGP VCD+R+L LV+R+N +++RKLGR SK STL VWRERD NDAAR CL AEPFPKAG RPDV QEDL EPMGF YA RLR+DRL +CR AAM + GV SG P SG+NS P L E G + A GGE G G + +GA A S +G+G + G G GA G +A EN+GGAR R MR+ TVE Q TP+T+ E+ACW++AVA+ +GV P +V KAV+++NTQY++Q +SPG Q LRGPTS +Q EK S+E L SLA+ ++L+E S+ + KRRKRGDV AK RVES TPL +++ +TDVLAN YLK+M L TSGKV +KR RL F + VYTP V GGA A Sbjct: 322 KYRCKNPACALNVRSARQSAEKAEKNGGP-KASEIVWDDAAVTSHCKNGVSFNTMDTRYMQLLPAAVVAKLPYRFFKQNGTSERLLDMVSATEGDTPGFHRLLVAREQGQELRDMQRYIRFAEEEQARERRSRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMNEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRVCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAIVEYLMRENKRMTRAEAERKAESKSMSRYVRTVSRPIEETIAEVSEVVRLHARLDAEGRERGELPLLQPELPPGKRGPRGAQAELNSLISCLRKGCGQDPLPVDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYLHVGTGKKTKLKRYVKKGGTAKNESFHRSLNAMTSSVSRLGPGVCDQRLLQLVHRFNLDKDRKLGRASKHSTLWVWRERDINDAARKCLVAEPFPKAGPRPDVQQEDLDAEPMGFEYAKRLREDRLGACRQAAMHMVGVG----------SGAPVPESGVNSPPLRLATVPETAVQGGRD-------AGGGEGSGAGASGVHGQDSGAGSAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGIGAXXXXXXXXXXXXXXSDTAEHGAAGEGATG-RASENLGGARRRPMRKNTVEGQRCFTPQTEAEVACWSQAVAETIGEGVSPSKVVPKAVDKFNTQYFVQAFSPGTGQGRLRGPTSVRQAEKMSKERASSNLATSLASASASLNEANSSTSVRSTKRRKRGDVDAAKARVESGTPLERSDIDKITDVLANEYLKSMGLPTSGKVVDKRERLLQLFAKSKRMVYTPDA-VDGGAGA 1264
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI) HSP 1 Score: 768 bits (1982), Expect = 4.180e-258 Identity = 384/605 (63.47%), Postives = 461/605 (76.20%), Query Frame = 1 Query: 664 KVSLQNPQCPMVIESARRSAANVSRGAGAVEAREIVLDDATVLLHCKNGVAFNTMDDRYMQLLPAEVVAQLPFHFFKQNGASDKLLDMVRATDGDTQTFHRLLVARDQGQDMRNMHRYIRFATEQQAKERASRLDGQFTKWPSWKFKENTLLGTPSVAVLNTFYRAAYQQDKDNMLREIIGLGDGEFLNMDGTFKVAGKVTDASTCLFFIMGDDAKIHGYAAVKSESQEQLFRFLTGYRDRRARQGTVFELQWIFDDRCCRGAKDPTKYFGTRIFPSVQRAPLADAFHSIQNLAGATTSKGHPRKALFAKAIGSVVRSKHPPDVEAVVEYLMKGNKRMSRADAQHAAVSKRWSRYVRTVSRPAQQTIDELRSLVEMHARMDAEGRARGELPLLQPELPPGRRGPRGAQPVLKSMIGCLEKGCGQDPLDVDGMHIDLGTGPKTKLKMYNCKGGTGKNEAFHRGLNRALPGVTRLGPDVCDERVLPLVYRYNCERNRKLGRTSKQSTLCVWRERDANDAARGCLTAEPFPKAGARPDVSQEDLHLEPMGFAYASRLRKDRLESCRHAAMDIAGVSCAPVPPRPGTSGNPQLNSGINSRPRLLPLTAE 2478 K +NP C + + SAR+SA + G +A EIV DDA V HCKNGVAFNTMD RYMQLLPA VVA+LP+ FFKQN S++LLDMV AT+GDT FHRLLVARDQGQ++R+M RYIRFA E+QA+ER SRLDG+FTKWP W+F TL+ TPSVAVLNT +AA+ QD+D+MLRE+I GEF+N DGTF+ AGKV D + CL+F+MG+DAKI GY AVKSES+E+L Y DRR ++GT+ L+W++DDRCCRG KD TKY+G +IFP V+RAPLAD+FH+ QNLAGATTSK H R+ ++A+ +G VRSK+ PDV+AVVEYLM+ NKRM+RA+A+ A SK SRYVRTVSRP ++TI E+ +V +HAR+DAEGR RGELPLLQPELPPG+RGPRGAQ L S+I CL KGCGQDPL VD M++ +GTG KTKLK Y KGGT KNE+FHR LN V+RLGP VCD+R+L LVYR+N +++RKLGR SK STL VWRERD NDAAR CL AEPFPKAG RPDV QEDL EPMGF YA RLR+DRL +CR AAM + GV SG P SG+NS P L E Sbjct: 220 KYRCKNPACALNVRSARKSAEKAEKNGGP-KASEIVWDDAAVTSHCKNGVAFNTMDTRYMQLLPAAVVAKLPYRFFKQNITSERLLDMVSATEGDTPGFHRLLVARDQGQELRDMQRYIRFAEEEQARERRSRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMDEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRGCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAVVEYLMRENKRMTRAEAERKAKSKSMSRYVRTVSRPIEETIAEVSEVVRLHARLDAEGRERGELPLLQPELPPGKRGPRGAQAELNSLISCLRKGCGQDPLPVDKMYLHVGTGKKTKLKRYVKKGGTAKNESFHRSLNAMTSSVSRLGPGVCDQRLLQLVYRFNLDKDRKLGRASKHSTLWVWRERDINDAARKCLVAEPFPKAGPRPDVQQEDLDAEPMGFEYAKRLREDRLGACRQAAMHMVGVG----------SGAPVPESGVNSPPLRLATVPE 813
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: A0A6H5L4Z6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z6_9PHAE) HSP 1 Score: 285 bits (729), Expect = 6.780e-80 Identity = 212/586 (36.18%), Postives = 298/586 (50.85%), Query Frame = 1 Query: 1675 MSRADAQHAAVSKRWSRYVRTVSRPAQQTIDELRSLVEMHARMDAEGRARGELPLLQPELPPGRRGPRGAQPVLKSMIGCLEKGCGQDPLDVDGMHIDLGTGPKTKLKMYNCKGGTGKNEAFHRGLNRALPGVTRLGPDVCDERVLPLVYRYNCERNRKLGRTSKQSTLCVWRERDANDAARGCLTAEPFPKAGARPDVSQEDLHLEPMGFAYASRLRKDRLESCRHAAMDIAGVSCAPVPPRP------------GTSGNPQLNSGINSRPRLLPLTAEAQAGGSGEGRAGXXGAAGGEMGGLVVPGTGAEVNGA-SGAVASL------------------------------------ASGVG-----TSGTRLGGLGRGAAGGQAPENIGGARVRHMRRQTVESQLPLTPRTDPEIACWARAVAKVTADGVPPRQVHSKAVEEYNTQYYLQQYSPGVAQEALRGPTSTQQTEKRSREATQRMLGASLANQPSALSEGGSTAVSKPK---------KRRKRGDVAEAKQRVESCTPLTLAEVASVTDVLANAYLKAMRLATSGKVAEKRLRLSSYFQTNSLSVY 3243 M +A+ A + WS +VRT SRPAQ+ D+L V + ++D AR ELPLL+P+LPPG+ GP GA L ++ CL +GCGQDP DV+ M+I LG GPKT L ++ KGGTGKNE FH G+NR + GV RLG + CD R+L ++R+N + +RKLGRTSKQSTL VWRER AN AA LT+ PFP+AG P V+ ED EPMGF YA + R + L + + AA + ++ +P G + + + R++PL R G GAA ++P T A + A +GAV L ASG G TS T G AA + N GG R R T+E LTP +D E+ +A +A+ T QV ++A + YN +YY Q + G A + +R PT+ ++ RS+ A + A +A++E S +R RGD A +RV S PL L +++++TD A AY+KA+ L +G VA KR +LS +F++ ++S Y Sbjct: 1 MLEMEAEVMAKKRAWSPFVRTYSRPAQEVEDDLVKYVGDYVKLDQAAIARKELPLLRPDLPPGKSGPIGAMAALNKLVKCLREGCGQDPFDVNQMYIPLGRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTSKQSTLWVWRERKANAAAESILTSRPFPRAGDTPTVAAED--FEPMGFEYAEQRRANALTNAKTAAANSLVLTRTSLPSTTAGDTSRAGAAAVGXXXXXXAGTAVGACARVMPLPLTN--------RGGRPGAA------ALMPSTIATGSSAGAGAVPPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGASGGGVMGGATSRTYRSNAGEAAAQDISRGNYGGGRRLPSRHPTLERVKALTPTSDAELEAFATCLAEATMVCDGKSQVMTEATKRYNARYYRQALTGG-APKLIRAPTTVEKARNRSKIAAKAGRDRDAAADLAAVNEISRVRTSSAXXXXXXXXXASKRARGDRDRASERVASGVPLKLEQISTLTDAAAIAYMKAIGLKLTGNVALKRKKLSDFFESKNISEY 569
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: A0A6H5KMP1_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMP1_9PHAE) HSP 1 Score: 248 bits (633), Expect = 1.520e-67 Identity = 203/567 (35.80%), Postives = 269/567 (47.44%), Query Frame = 1 Query: 1801 MDAEGRARGELPLLQPELPPGRRGPRGAQPVLKSMIGCLEKGCGQDPLDVDGMHIDLGTGPKTKLKMYNCKGGTGKNEAFHRGLNRALPGVTRLGPDVCDERVLPLVYRYNCERNRKLGRTSKQSTLCVWRERDANDAARGCLTAEPFPKAGARPDVSQEDLH--------------LEPMGFAYASRLRKDRLESCRHAAMDIAGVSCAPVPPRPGTS--GNPQLNSGINSR--PRLLPLTAEAQAGGSGEGRAGXXGAAG---------------------------------GEMGGLVVPGTGAEVNGASGAVASLASGVGTSGTRLGGLGRGAAGGQAPENIGGARVRHMRRQTVESQLPLTPRTDPEIACWARAVAKVTADGVPPRQVHSKAVEEYNTQYYLQQYSPGVAQEALRGPTSTQQTEKRSREATQRMLGASLANQPSALSEGGSTAVS-------------KPKKRRK-RGDVAEAKQRVESCTPLTLAEVASVTDVLANAYLKAMRLATSGKVAEKRLRLSSYFQTNSLSVYTPPRDV*GGA--AAAGGAIQG 3300 MDA+ ARG +PLL+P+ PPG+ GP GA L+ M CL KGC QDPL VD M+I G GPKT L ++ KGGTGKNE FH G+NR + GV R+G + CD R+L V R+N + +RKLG TSKQST WRER N AA G L + PFPKA P D + LEPMGF + + + +AA I V R G + +P + +G +R P PL G G AG G A G +G VPG GA + + + ++ + G A N GGAR H +R T+E Q +TP TD E+ +AR +A A G +V + YNT+++ QQ A LRGPTS Q+ K+S ++ +A+ G TA S + K+RR R D A RV + PLT+ E+ ++ D +A YL M TSG+VA KR RL SYF+ ++L+ YTP GGA AAG A+ G Sbjct: 1 MDADDVARGGIPLLRPDAPPGKSGPTGAMAALEKMRRCLRKGCAQDPLGVDDMYIPRGRGPKTNLMRWSKKGGTGKNENFHGGINRLVAGVARIGVEACDARLLQRVCRHNLDMDRKLGNTSKQSTRWPWRERVVNKAASGILASLPFPKAPPDPKHDVCDANSLLFVCRCQIPTKDLEPMGFEFHTARKAAGRREAMNAATRI-------VAERRGNNPRSSPSMTAGSAAREGPETAPLPLPTAGGRIGTAAAGAAGPAEXXXXXXXXXXXXXXXXXXXXXXXDSPSPSSTQEGRVG-TAVPGXGAVLGAGAAPLPTMTTT-----------------GAAFANYGGARKLHSKRPTIEGQKSVTPTTDGELDAFARCLATARAQG--RGEVMEETARLYNTEFFTQQLDRD-APIILRGPTSAQKLRKKSTTTATAKRARQVSADFAAVQSAGRTASSCSTSPSNXXXXXXRSKRRRDVRPDRENAVARVANRVPLTIEEIETLPDAVAIPYLSDMDQPTSGRVAAKRERLKSYFRNHNLTSYTPV----GGANKKAAGAAVTG 535
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: A0A6H5KHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD6_9PHAE) HSP 1 Score: 221 bits (562), Expect = 1.730e-61 Identity = 127/335 (37.91%), Postives = 174/335 (51.94%), Query Frame = 1 Query: 955 TFHRLLVARDQGQDMRNMHRYIRFATEQQAKERASRLDGQFTKWPSWKFKENTLLGTPSVAVLNTFYRAAYQQDKDNMLREIIGLGDGEFLNMDGTFKVAGKVTDASTCLFFIMGDDAKIHGYAAVKSESQEQLFRFLTGYRDRRARQGTVFELQWIFDDRCCRGAKDPTKYFGTRIFPSVQRAPLADAFHSIQNLAGATTSKGHPRKALFAKAIGSVVRSKHPPDVEAVVEYLMKGNKRMSRADAQHAAVSKRWSRYVRTVSRPAQQTIDELRSLVEMHARMDAEGRARGELPLLQPELPPGRRGPRGAQPVLKSMIGCLEKGCGQDPLDVDGM 1959 T+ R+LVA +QG+++R MHRYIRFA + ++ E A WP WKF TL+ TPS+AVLNT ++A + DK++M REI G+FL MDGT+++ +V D+ CLFF++G+DAK+ Y AV+SE +E+++ L Y +RR R GT+ L+W +DD CCRGA D TK + IF V R LAD+FH G V D+L V + ++D AR ELPLL+P+LPPG+ GP GA L ++ CL KGCGQDPLDV+ M Sbjct: 3 TYRRILVAGEQGRELREMHRYIRFAAKHRSAEHAL--------WPGWKFSRGTLISTPSIAVLNTIFKAGHDNDKEHMQREIHSQYGGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVPAYGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWFYDDLCCRGADDVTKGWILDIFEGVMRRALADSFH-----------------------FGWVE---------------------------------------------------DDLVKYVGDYVKLDQAAIARKELPLLRPDLPPGKSGPIGAMAALNKLVKCLWKGCGQDPLDVNQM 255
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: A0A6H5JZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ63_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.880e-56 Identity = 126/352 (35.80%), Postives = 173/352 (49.15%), Query Frame = 1 Query: 775 DDATVLLHCKNGVAFNTMDDRYMQLLPAEVVAQLPFHFFKQNGASDKLLDMVRATDGDTQTFHRLLVARDQGQDMRNMHRYIRFATEQQAKERASRLDGQFTKWPSWKFKENTLLGTPSVAVLNTFYRAAYQ---------------------------------------------QDKDNMLREIIGLGDGEFLNMDGTFKVAGKVTDASTCLFFIMGDDAKIHGYAAVKSESQEQLFRFLTGYRDRRARQGTVFELQWIFDDRCCRGAKDPTKYFGTRIFPSVQRAPLADAFHSIQNLAGATTSKGHPRKALFAKAIGSVVRSKHPPDVEAVVEYLMKGNKRMSRADAQ 1695 D+AT+ H NG + TMDDR+ + QG+++R MHRYIRFA + ++ E A WP WKF TL+ TPS+ VLNT Y+A + QDK++M REI G+FL MDGT+++ +V D+ CLFF++G+DAK+H AV+SE +E+++ L Y +RR R GT+ L+W +DD CCRGA D TK + IF V R LAD+FH Q L GATTSK HPRKA+FA +G ++R+KH PDV+ V YL + MS +A+ Sbjct: 168 DEATIREHGPNGASLTTMDDRHGE----------------------------------------------QGRELREMHRYIRFAAKHRSAEHAL--------WPGWKFSRGTLISTPSIVVLNTIYKAGHDDVRGGSVDTFLVLVRFLVSARVLFRRVQILLCRHTDHNVVFCRHPQDKEHMQREIHSQYWGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAGGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWFYDDLCCRGADDVTKGWILDIFEGVMRRALADSFHFGQTLVGATTSKNHPRKAVFAAGVGQILRTKHQPDVKVVAAYLKRVIPGMSEMEAE 465
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 209 bits (531), Expect = 6.780e-51 Identity = 127/333 (38.14%), Postives = 181/333 (54.35%), Query Frame = 1 Query: 955 TFHRLLVARDQGQDMRNMHRYIRFATEQQAKERASRLDGQFTKWPSWKFKENTLLGTPSVAVLNTFYRAAYQQDKDNMLREIIGLGDGEFLNMDGTFKVAGKVTDASTCLFFIMGDDAKIHGYAAVKSESQEQLFRFLTGYRDRRARQGTVFELQWIFDDRCCRGAKDPTKYFGTRIFPSVQRAPLADAFHSIQNLA---------------------------------GAT-TSKGHPRKALFAKAIGSVVRSKH--PPDVEAVVEYLMKGNKRMSRADAQHAAVSKRWSRYVRTVSRPAQQTIDELRSLVEMHARMDAEGRARGELPLLQ 1845 T+ R+LVA +QG+++R MHRYIRFA + ++ E A WP WKF TL+ TPS+AVLNT Y+A + DK++M REI G+FL MDGT+++ +V D+ CLFF++G+DAK+H Y AV+SE +E+++ L Y +RR R GT+ L+W++D CCRGA D TK + IF V R LA++FH Q GA +KG ++ S H PD+E V +L + N M +A+ A + WS +VRT SRPAQ+ D+L + ++D AR ELPLL+ Sbjct: 3 TYRRILVAGEQGRELREMHRYIRFAAKHRSAEHAL--------WPGWKFSRGTLISTPSIAVLNTIYKAGHDDDKEHMQREIHSQYGGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHSYGAVQSERKEEIYLLLKRYAERRRRSGTLLALKWLYDYLCCRGADDVTKGWILDIFEGVMRRALANSFHFGQYAXEEIYLLLKRYAERRRRSGTLLALKWLYDYLCCRGADDVTKGWILDIFEGVMRRALANSFHFGQPDLEEVAAHLKRVNPGMLEMEAEVMAKKRAWSPFVRTYSRPAQEVEDDLVKDAGDYVQLDQAAIARKELPLLR 327
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: A0A6H5KNQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ6_9PHAE) HSP 1 Score: 183 bits (465), Expect = 6.700e-49 Identity = 92/210 (43.81%), Postives = 132/210 (62.86%), Query Frame = 1 Query: 916 LLDMVRATDGDTQTFHRLLVARDQGQDMRNMHRYIRFATEQQAKERASRLDGQFTKWPSWKFKENTLLGTPSVAVLNTFYRAAYQQDKDNMLREIIGLGDGEFLNMDGTFKVAGKVTDASTCLFFIMGDDAKIHGYAAVKSESQEQLFRFLTGYRDRRARQGTVFELQWIFDDRCCRGAKDPTKYFGTRIFPSVQRAPLADAFH--SIQN 1539 LLD VRA +GD Q + R L A DQG+++R+M RY+ FA + G + WP WKF TL+GTPSVAVLNT Y A + ++KD M R I +G+ +NMDGT+++ +V CL+F++G++AK+H Y A+ SES+ +L Y DRR R GT+ LQ+++DD CC+ A D T+ + IF + RA L+D+FH +QN Sbjct: 2 LLDQVRAMEGDLQVYRRALAAGDQGRELRDMRRYMSFAEKH----------GDGSLWPGWKFVRGTLVGTPSVAVLNTIYNAGHDEEKDYMRRVIQAECEGQIVNMDGTWRIGLRVPGVPACLYFLLGENAKVHDYGAITSESKSELRPLFMRYADRRRRNGTLPTLQYLYDDMCCKNAVDVTEPWMKSIFTGLSRAALSDSFHFGQVQN 201
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: A0A835YMJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMJ3_9STRA) HSP 1 Score: 180 bits (456), Expect = 8.360e-45 Identity = 124/387 (32.04%), Postives = 190/387 (49.10%), Query Frame = 1 Query: 1117 LGTPSVAVLNTFYRAAYQQDKDNMLREIIGLGDGEFLNMDGTFKVAGKVTDASTCLFFIMGDDAKIHGYAAVKSESQEQLFRFLTGYRDRRARQGTVFELQWIFDDRCCRGAKDPTKYFGTRIFPSVQRAPLADAFHSIQNLAGATTSKGHPRKALFAKAIGSVVRSKHPPDVEAV----VEYLMKGNKRMSRADAQHAAVSKRWSRYVRTVSRPAQQTIDELRSLVEMHARMDAEGRARGELPLLQPELPPGR-RGPRGAQPVLKSMIGCLEKGCGQDPLDVDGMHIDLGTGPKTKLKMYNCKGGTGKNEAFHRGLNRALPGVTRLGPDVCDERVLPLVYRYNCERNRKLGRTSKQSTLCVWRERDANDAARGCLTAEPFPKAGAR 2262 L S VL + AA+ + K +L +++ G ++ DGTFK+AG+VT ++T L FI+G D + +AAVK + + R R G +F++Q ++ DRCC DP+ IFP +R D +H+I L ATT HP FA A+G +R H DVEA+ ++ + + + A+ A+++ ++ VRTV P LR + + D E R + P + P GR + R + V ++ I C +KGC DPL MH L PKTK +Y G T KNEA H +N+ + G++++G D + R+L V+ +N +R+ + GR S C W A C AEP P+ R Sbjct: 48 LSVSSDDVLRRVFNAAFSRIKPYLLADLVRRDPGCCISGDGTFKIAGRVTSSATVLHFILGADHCVVAFAAVKGDGFTPVIPLYMQLRRRLEAMGKLFDVQAVYSDRCCEQRNDPSTAPQAVIFPGCRRV-WGDGWHAINTLIEATTRSNHPDLQAFAAAVGKAIRVPHQEDVEALKRLFIDQARQQGQMLHPDVAELRALNRGYAESVRTVGPPGSVIAANLRRVFAKFDKNDGE-RPDSKAPPERLYRPSGRDKSQRSTEEVFENTIRCADKGCLTDPLPFPRMHTLLRVMPKTKRPIYRSVGQTVKNEALHSKVNKLVDGISKVGADSMNSRLLLRVFAHNRQRDVEWGRCSAHEP-CPW-----ITARALCPGAEPPPEPQER 426
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Match: D8LRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE6_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.400e-42 Identity = 102/226 (45.13%), Postives = 135/226 (59.73%), Query Frame = 2 Query: 17 RWRNEILQIAVSSQLKAAHRHLPTMCADGRLIPPKDAAADAPHTSDAGAPAAFKGKGKGPASKGKLLSPAEVAAAFNSKFPQAPICRPADNVETRALAAMQPTAAMKKKATAKDGRVDEVRLGELVREAAMAVFATVSVLVAVYVHEIVFFNLLVRDKRFQMLTAAGMGVMMMCPSCLTNKFVHPPGVSGNGFPSIFSQKVRVAHDVDGVVAPLHAKYRCKTRSAP 694 RW N LQ A+S +KA ++LPT+ DG L+PP +G+G + SP AAAF +FP +P+C+P ++VETRA+ AMQP+AA +D + LG +REAAMA FAT+ V +A YVHE++FF LVRD RF++ T G GV M+CP C +NKFV PPGVSG+GFP + K+RVAHDV GVV P+ +Y C P Sbjct: 44 RWNNRGLQDAMSRAVKAILQYLPTITGDGSLLPP-----------------GTRGRGSD-----NVRSPRLEAAAFKRRFPNSPVCKPLESVETRAIEAMQPSAAT---GAMQDRPKKDEDLGHRLREAAMATFATIDVEIAPYVHEVIFFEELVRDDRFKVNTRGGAGVRMICPGCKSNKFVKPPGVSGHGFPCM-GAKLRVAHDVAGVVVPVTGRYACLGPGCP 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.222.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.222.3 >prot_P-littoralis_Contig10.222.3 ID=prot_P-littoralis_Contig10.222.3|Name=mRNA_P-littoralis_Contig10.222.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=857bp MVIESARRSAANVSRGAGAVEAREIVLDDATVLLHCKNGVAFNTMDDRYMback to top mRNA from alignment at P-littoralis_Contig10:792026..797757- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.222.3 ID=mRNA_P-littoralis_Contig10.222.3|Name=mRNA_P-littoralis_Contig10.222.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5732bp|location=Sequence derived from alignment at P-littoralis_Contig10:792026..797757- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:792026..797757- >mRNA_P-littoralis_Contig10.222.3 ID=mRNA_P-littoralis_Contig10.222.3|Name=mRNA_P-littoralis_Contig10.222.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2571bp|location=Sequence derived from alignment at P-littoralis_Contig10:792026..797757- (Pylaiella littoralis U1_48)back to top |