mRNA_P-littoralis_Contig10.183.4 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: D7FQF2_ECTSI (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF2_ECTSI) HSP 1 Score: 556 bits (1434), Expect = 9.890e-189 Identity = 268/295 (90.85%), Postives = 282/295 (95.59%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKVDEEWPPRFAKLELQMSNGTCLALTDPRRLARVRLRSEPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQKKGL 922
MPELPEVETSRLYVEEFC+GSTIT VHATEQGGGPRDGQFDDIVIGE +TAK LK +LEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKV EEWPPRFAKLE+QMSNG CLALTDPRRL+RV+LR+EPEASPPISLLGPDPLTHPLSLE FAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQA VHPGAACNTL +Q+AALH +LLSVCREACEA+ADYT FPKEWLFHHRWGKGK+SEG+PRVSSGH I+FDVVGGRTTAIVPAVQKKGL
Sbjct: 1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDMTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLEIQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQIAALHSRLLSVCREACEARADYTSFPKEWLFHHRWGKGKNSEGAPRVSSGHPIVFDVVGGRTTAIVPAVQKKGL 295
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A6H5JAV5_9PHAE (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV5_9PHAE) HSP 1 Score: 456 bits (1172), Expect = 4.540e-146 Identity = 271/541 (50.09%), Postives = 282/541 (52.13%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVLDK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PPHPLFHFGMTGAFTVKGEKRHKFVKFKVDEEWPPRFAKLELQMSNGTCLALTDPRRLARVRLRSEPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHR--------------WGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQKKGL 922
MPELPEVETSRLYVEEFC+GSTIT VHATEQGGGPRDGQFDDIVIGE VTAK LK +LEGRKIVELRRRGKQMWFVLDK PPHPLFHFGMTGAFTVKGEKRHKFVKFKV EEWPPRFAKLELQMSNG CLALTDPRRL+RV+LR+EPEASPPISLLGPDPLTHPLSLE FAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQA VHPGAACNTL +QVAALH +LLSVCREACEA+ADYT FPKEWLFHHR WGKGK+SEG+PRVSSGH I+FDVVGGRTTAIVPAVQKKGL
Sbjct: 1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLDKEGLHRLARGQVGREHEHLRVKLTKGDSQECLGVDIEKLSNYVGKFGWGVCIANMIETAKVRKHERRAMEAKKGPSGEGEQASQKKSEKKRKANDGVRKISNREKRKLRVGSWNVCGFARSERKRLEIVDQVEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGVVGFLVKEHLFDVVEVVVKTEFEESLWLKISGERGMQNIRVRPPLISRLHPIASRPPHPLFHFGMTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLELQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQVAALHSRLLSVCREACEARADYTSFPKEWLFHHRQGMHHPRSPTRTLLWGKGKNSEGAPRVSSGHPIVFDVVGGRTTAIVPAVQKKGL 541
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A7S1N840_9EUGL (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N840_9EUGL) HSP 1 Score: 326 bits (836), Expect = 3.900e-101 Identity = 167/294 (56.80%), Postives = 200/294 (68.03%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVLDKPP-HPLFHFGMTGAFTVKGEKRHKFVKFKV-DEEWPPRFAKLELQMSNGTCLALTDPRRLARVRLRSEPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQK 913
MPELPEV+ +R V + C G I +V E GGGPRDGQFDDIVIGEGVT + L S++GRK+V + R+GKQ+WF L PLFHFGMTG+FTVKG K K+ +F V DE WPPRF KLEL + G LA TDPRRL RV+LR+ P PPISLL PDP+T P E F+ L K PIKAVLL Q+R V GVGNWVADEV FQ+ ++PG L QV LH ++ VC+EAC+AQAD FP +WLFH+RWG GKS++ R+ G I F+ GRTTA VP QK
Sbjct: 15 MPELPEVDAARQLVMQHCGGKVIDQVLCVESGGGPRDGQFDDIVIGEGVTPEKLTKSMKGRKLVAVHRKGKQLWFELGGGDLSPLFHFGMTGSFTVKGVKALKYKEFLVRDEVWPPRFTKLELVFTGGVRLAFTDPRRLGRVKLRAAPVTEPPISLLAPDPVTGPFHCEAFSQILRKAQTPIKAVLLDQERAVCGVGNWVADEVLFQSGIYPGTTAAQLTDAQVETLHATIIRVCKEACQAQADSDRFPLDWLFHYRWGHGKSAD---RLPDGRRIAFETCAGRTTAWVPEAQK 305
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A835YY62_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY62_9STRA) HSP 1 Score: 313 bits (802), Expect = 8.890e-94 Identity = 160/317 (50.47%), Postives = 209/317 (65.93%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVLD-KPPHPLFHFGMTGAFTVKGEKRHKFVKF----------------------KVDEEWPPRFAKLELQMSNGTCLALTDPRRLARVRLRSEPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQKKG 919
MPELPEVE +R +EE CVG+ I V+A E GGGPRDGQFDDI++GEGVT + + ++L+GRK++ R+GK +W L+ K HP H GMT A + E+R F +V +EWP RF KLE+ SNG LA TDPRRL R+ LR++P++ PPIS L PDPL P ++E A AK +AP+KAVLL Q+R+V GVGNWVADEVC+QA +HPG+ CNTL+ +Q++ LH L+ V ACEA AD +PK WLFH+RW K +++ G + G+ I F+ VGGRTTA+VP V KKG
Sbjct: 1 MPELPEVECARRLLEEHCVGAKIVSVNARESGGGPRDGQFDDIIMGEGVTEEDVVAALKGRKLLHAGRKGKNLWLELEGKGKHPTMHLGMT-ACNFRSEQRQLFFLLCAFTVHHNSLMDVLVTWCCSLLQVGDEWPLRFTKLEIDFSNGVKLAFTDPRRLGRICLRADPKSEPPISTLAPDPLYEPPTVEDLVARFAKISAPLKAVLLDQNRIVCGVGNWVADEVCYQAGIHPGSPCNTLSAEQISQLHEALIQVVTVACEANADSDKYPKSWLFHYRWSK-RNNGGKVTDAHGNPIEFETVGGRTTALVPKVMKKG 315
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A7S2UZQ4_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZQ4_9STRA) HSP 1 Score: 298 bits (764), Expect = 6.930e-89 Identity = 149/314 (47.45%), Postives = 201/314 (64.01%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVLDKPP-----------------HPLFHFGMTGAFTVKGEKRHKFVKFKVDEE--WPPRFAKLELQMSNGTCLALTDPRRLARVRLRSEPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQKKGL 922
MPELPEV+++ +V + C G + V EQGGGPR+G FD+I++GEG+ A+ + ++ GR++ + RRGKQ+WF + P H LFH GMTG+F ++G+ +V+ K +++ WPPRF KLEL NG +A DPRRL R++LRS P SPPISLL DP+ P +L F L + +AP+KA LL Q ++VSGVGNW+ADEVCFQA VHP CN L + A LH LL +C+ A + +ADY FP WLFH+RWGKG + + ++ +G I F VGGRTTA+VPAVQ K L
Sbjct: 1 MPELPEVDSAGKFVWKNCKGQRVVDVCPNEQGGGPREGLFDEIIMGEGLDAENITKAMLGRRLQAVGRRGKQLWFTFSEKPTEKSKKKKEDAAESCSSHVLFHLGMTGSFRIQGKDGVCYVRLKPEDKTVWPPRFCKLELVFENGVRVAFCDPRRLGRIKLRSNPLESPPISLLARDPVEDPPTLAQFQDRLKELSAPVKAALLDQSKIVSGVGNWIADEVCFQARVHPATRCNDLTEEMSARLHSSLLDICKFAVDVEADYHQFPDSWLFHYRWGKGNKT--NSKMPNGDKIEFSEVGGRTTAVVPAVQGKPL 312
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A516AG26_LINPO (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG26_LINPO) HSP 1 Score: 290 bits (743), Expect = 6.080e-88 Identity = 153/299 (51.17%), Postives = 190/299 (63.55%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVLD-KPPHPLFHFGMTGAFTVKGEKRHKFVKFKVDEEWPPRFAKLELQMSNG----TCLALTDPRRLARVRLRSEPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQKKG 919
MPELPEVE R +E CVG + +V + E GGGP DG+FD VIGEGV + L+++L R ++ RRRGK +W L + P LFH GMTGA + G +R F F+VDE WPPRF KL+L++ T LA DPRR +V LR PP+SLLGPDPL P LE FA L + AP+KA+LL Q++ V GVGNWVADEV +A VHP A TL+ Q+AALHR +LSV + A AD FPK WLFH RWG+G S G + G + F+ VGGRTTA VPA+Q+ G
Sbjct: 1 MPELPEVEAMRGLLERHCVGCKVLRVISLEAGGGPLDGKFDSKVIGEGVGPQQLEAALLRRPVLAARRRGKHLWLELGGQGPQLLFHCGMTGALAIDGVERFSFQSFRVDEAWPPRFTKLQLELGGRGQEPTRLAFADPRRFGKVLLRQNAAEEPPVSLLGPDPLASPFPLEAFAEQLRRSAAPVKALLLDQEKAVCGVGNWVADEVLREARVHPAAPARTLSDGQLAALHRGVLSVLKRAVAVDADAARFPKNWLFHCRWGQGPSGAGVC-LPDGSEVAFEDVGGRTTAYVPALQRPG 298
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A7S0NUS3_9EUKA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NUS3_9EUKA) HSP 1 Score: 273 bits (698), Expect = 8.580e-81 Identity = 154/300 (51.33%), Postives = 185/300 (61.67%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVLDKPPHP------LFHFGMTGAFTVKGEKRHKFVKFKVD-EEWPPRFAKLELQMSNGTCLALTDPRRLARVRLRS-EPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQK 913
MPELPEVE R +E +G +T + ATEQGGGPRDG+FDD ++GEGVT L ++L+ + ++ ++RRGKQ+W L L HFGMTGA +KG + KF +D WPPRF KLEL + T LA TDPRR R+ LR P PP+S L DPLT PL L FAAAL + +APIKA LL Q GVGNWVADEV +QA V P A CN L+ Q+ H ++L+VC AC A AD + FP WLFHHRW S GS G I FD VGGRTTA VPA QK
Sbjct: 1 MPELPEVEAQRRTIEAATLGKQVTLLVATEQGGGPRDGEFDDKIVGEGVTPPELAAALQDKWVLAVKRRGKQLWVELSATRGGACCGCLLLHFGMTGAVVIKGRDAPLYKKFSIDMSSWPPRFTKLELVFGD-TSLAYTDPRRFGRILLRGPSPSDVPPLSELAADPLTDPLPLANFAAALRRKSAPIKAALLDQGFAFCGVGNWVADEVLYQAGVLPSAPCNRLSDAQIERTHAQVLAVCNVACAAGADASAFPPGWLFHHRWQNQTS--GSMDSPLGR-IHFDTVGGRTTAFVPAKQK 296
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A0M0JLU5_9EUKA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLU5_9EUKA) HSP 1 Score: 271 bits (694), Expect = 2.670e-80 Identity = 149/296 (50.34%), Postives = 182/296 (61.49%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSL-EGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKV-DEEWPPRFAKLELQMSNGTCLALTDPRRLARVRLRSEPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQKKG 919
MPELPEVET+R + CV IT E GGGPRDG FD+IV + + SSL EG+++VE+RRRGKQ+W VL PPH L HFGMTGAF V+G + +F+V DE WPPRF KLELQ G LA DPRRL R+RLR++P+ P L PDPL P+ + LA IKA+LL Q +VSGVGNWVADEV F A VHP A C +L+ QV L L V A A FP++WLFH+RWGK + R G +I F VGGRT+A+V + Q+KG
Sbjct: 1 MPELPEVETARNLLATHCVSQRITMAVTVEGGGGPRDGLFDEIVFDDKEADAAIVSSLLEGKQLVEVRRRGKQLWLVLSSPPHLLAHFGMTGAFVVRGVAAQSYKEFRVHDEAWPPRFTKLELQFEAGNALAFCDPRRLGRLRLRADPQNEEPWRSLAPDPLIDPIEKGRWLEVLAAKGCNIKALLLDQAALVSGVGNWVADEVLFHAGVHPEAICRSLSDAQVDRLRAALTHVLNVAVSCGAKDEEFPRDWLFHYRWGKVPGTVPGER---GGAITFLTVGGRTSAVVLSRQRKG 293
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A8J5XVG9_DIALT (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVG9_DIALT) HSP 1 Score: 271 bits (692), Expect = 3.430e-79 Identity = 152/307 (49.51%), Postives = 186/307 (60.59%), Query Frame = 2 Query: 38 MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVLDKP-------PHPLFHFGMTGAFTVKGEKRHKFVKFKVDEE-WPPRFAKLELQMSNGT----CLALTDPRRLARVRLRS-EPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQKKG 919
MPELPEVE R +E CVG + + EQGGG RDG FDD VI EG+TA+ L S+L G ++ RRRGKQMW L + L H GMTGA +G + K+ + +D WPP+F KLEL +++ T LA TD RR R+ LR + SPPI L DP+ +P S E FA LA+PT IKA LL Q R+V GVGNWVADEV +QA + P A CN L+ +Q AALH L+ VC AC+A AD ++FP WLFHHRW + GS G I FD VGGRTTA +P VQK G
Sbjct: 1 MPELPEVEAQRAMLERSCVGMRVRALTTVEQGGGGRDGLFDDKVIAEGLTAERLTSALVGLWVLAARRRGKQMWLELGASRDAKTAISNLLIHLGMTGAVLARGGEGPKYKRLTIDATVWPPKFTKLELSLADETGCTCSLAYTDSRRFGRILLREGDATLSPPILALAADPILNPPSAEEFARMLARPTTSIKAALLDQSRLVCGVGNWVADEVLYQARILPSAPCNALSAEQCAALHATLIDVCTTACKANADSSLFPPAWLFHHRWAN--QTTGSISSPLGR-ICFDTVGGRTTAFLPHVQKPG 304
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Match: A0A7S2W0X7_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0X7_9STRA) HSP 1 Score: 265 bits (678), Expect = 2.190e-78 Identity = 139/277 (50.18%), Postives = 173/277 (62.45%), Query Frame = 2 Query: 134 GGPRDGQFDDIVIGEGVTAKGLKSSLEGRKIVELRRRGKQMWFVL-DKPPHP--------------LFHFGMTGAFTVKGEKRHKFVKFKVDEEWPPRFAKLELQMSNGTCLALTDPRRLARVRLRSEPEASPPISLLGPDPLTHPLSLEVFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQAEVHPGAACNTLATQQVAALHRKLLSVCREACEAQADYTVFPKEWLFHHRWGKGKSSEGSPRVSSGHSIIFDVVGGRTTAIVPAVQKKG 919
GG R+GQFDDIVIGEGV+ + ++L R+ V RRGKQ+WF L D P LFH GMTG+F VKG R +V+FKVDE WPP+F KL L+ G +A DPRRL R+ LR PE PPIS L PDP+ PL F + L + P+K+VLL Q++VV GVGNWVADEV +QA VHP A N+L+ Q A+H L VCR A A FP++WLFH RWGKGK G + + G ++F+ +GGRT+AIVPA QK G
Sbjct: 1 GGAREGQFDDIVIGEGVSEADITAALVSRRFVSAHRRGKQVWFCLSDHKPGSRSGTKGLAGEATAVLFHCGMTGSFAVKGVDRVSYVRFKVDEAWPPKFTKLLLKFEGGVEVAFCDPRRLGRILLRRCPEEEPPISKLAPDPIEQPLQSAEFCSRLQSFSGPVKSVLLDQEKVVCGVGNWVADEVLYQARVHPNAKANSLSDSQALAVHESLDVVCRTAVSVNARSAAFPEDWLFHVRWGKGK---GPVKDAQGQRVVFETIGGRTSAIVPARQKMG 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.183.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.183.4 >prot_P-littoralis_Contig10.183.4 ID=prot_P-littoralis_Contig10.183.4|Name=mRNA_P-littoralis_Contig10.183.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=612bp MPELPEVETSRLYVEEFCVGSTITKVHATEQGGGPRDGQFDDIVIGEGVTback to top mRNA from alignment at P-littoralis_Contig10:663079..670585- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.183.4 ID=mRNA_P-littoralis_Contig10.183.4|Name=mRNA_P-littoralis_Contig10.183.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=7507bp|location=Sequence derived from alignment at P-littoralis_Contig10:663079..670585- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:663079..670585- >mRNA_P-littoralis_Contig10.183.4 ID=mRNA_P-littoralis_Contig10.183.4|Name=mRNA_P-littoralis_Contig10.183.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1836bp|location=Sequence derived from alignment at P-littoralis_Contig10:663079..670585- (Pylaiella littoralis U1_48)back to top |