mRNA_P-littoralis_Contig10.132.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: A0A6H5KW18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW18_9PHAE) HSP 1 Score: 274 bits (700), Expect = 3.300e-84 Identity = 128/137 (93.43%), Postives = 135/137 (98.54%), Query Frame = 2 Query: 2 SINMDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVITLVFAPIVVFWAIAMLEFWKRKEKRVAL 412 SI++DILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLR NWLVAKQWPWE PY+Q+KDYYGEKIGLYFHFLGHLTTWLIPLG+AGL+TAMTVYISGNEEHVITL+FAPIVVFWAIAMLEFWKRKEKRVAL Sbjct: 354 SISIDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRNNWLVAKQWPWETPYEQIKDYYGEKIGLYFHFLGHLTTWLIPLGVAGLITAMTVYISGNEEHVITLIFAPIVVFWAIAMLEFWKRKEKRVAL 490
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: D7FQE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE2_ECTSI) HSP 1 Score: 246 bits (629), Expect = 1.930e-77 Identity = 117/134 (87.31%), Postives = 124/134 (92.54%), Query Frame = 2 Query: 2 SINMDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVITLVFAPIVVFWAIAMLEFWKRKEKR 403 SI++DILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLR NWLVAKQWPWE+PYDQ+KDYYGEKIGLYFHFLGHLTTWLIPLG+AGL+TAMTVYISGNEEHVITL+FAPIVVFWAI R E R Sbjct: 353 SISIDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRNNWLVAKQWPWESPYDQIKDYYGEKIGLYFHFLGHLTTWLIPLGVAGLITAMTVYISGNEEHVITLIFAPIVVFWAIGEESAKARLETR 486
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: A0A7S2SUB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUB7_9STRA) HSP 1 Score: 111 bits (278), Expect = 7.050e-26 Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 2 Query: 5 INMDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVITLVFAPIVVFWAIAMLEFWKRKEKRVAL 412 I I + P G G +D+L I+ +P H K+ K+ L WL +Q PW P D +++Y GEKI LYF FLGH TTWL+P+GI G+ ++ + + L FA + W+ MLEFWKR+E +A+ Sbjct: 204 IMHSIFETPRAEKGCGFNLDELVADKCIITAYPLHNKREKMLLERRWLRIEQLPWNQPLDGIQEYLGEKIALYFVFLGHYTTWLVPIGIFGIAVWAEIFAEESYNVQLQLYFAVFIACWSTLMLEFWKRRESTMAM 339
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: A0A6V2ZSX1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2ZSX1_HETAK) HSP 1 Score: 107 bits (268), Expect = 1.590e-24 Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 2 Query: 44 GAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVITLV-FAPIVVFWAIAMLEFWKRKEKRVAL 412 GA L + ++K + I LFP H + L + WL QWPW+ P D +KDY+GEKIGLY+ +LGH TTWL+P + GL + G + + + L+ F+ ++ WA LE+WKRKE A+ Sbjct: 255 GANLNITEMKDKKGIEDLFPLHDYDELVGLEKRWLKLMQWPWQQPTDDIKDYFGEKIGLYYVWLGHYTTWLMPPMLTGLGFWFAIATQGGDPNTVYLIPFSALIALWATFFLEYWKRKESETAM 378
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: A0A812UTJ6_SYMMI (Ano4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTJ6_SYMMI) HSP 1 Score: 100 bits (250), Expect = 2.660e-23 Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 17 ILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVITL-VFAPIVVFWAIAMLEFWKRKE 397 I+ A G L + K+ +G +L FP H L E WL Q PW P D++K+Y+GEKIGLYF +LGH T+WL + G + + N+ + + + FA + FWA LEFWKRKE Sbjct: 45 IIAAKQYENGCNLDIYKMSKEGALLGFFPLHDHVELHTLEEKWLQFIQLPWNQPTDEIKNYFGEKIGLYFLWLGHYTSWLSVAAVVGFFCWINIAADDNDPNAVIMPYFASFIAFWATLFLEFWKRKE 172
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: D8LEZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ6_ECTSI) HSP 1 Score: 103 bits (258), Expect = 3.430e-23 Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 14 DILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVI-TLVFAPIVVFWAIAMLEFWKRKEKRVAL 412 IL A G L + +L +LA FP H K L+ WL + PW+ P D VK+Y+GEKIGLYF +LGH TTWLIP I G++ + V +SGN+ + + + +F+ + W EFWKRK+ R A+ Sbjct: 148 SILVAKTADSGCNLDILRLVKSKCLLAFFPLHDKVELRALQRKWLQYFRPPWKEPIDDVKNYFGEKIGLYFLWLGHYTTWLIPASIVGVMAWVHVALSGNDPNALGSALFSIFIGLWTTLFTEFWKRKQARCAM 281
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: A0A482SUW2_9ARCH (Anoct_dimer domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUW2_9ARCH) HSP 1 Score: 103 bits (257), Expect = 4.610e-23 Identity = 58/133 (43.61%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 17 ILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHV-ITLVFAPIVVFWAIAMLEFWKRKEKRVAL 412 I+ A GG L V +LK ILA FP H L E WL Q PW+ + VKDY+GEKI L+F FLGH T+WL P GI G+ + V N I FA V W+ +LE+WKRKEK A+ Sbjct: 243 IIAAKQTEGGCDLDVYRLKRDSCILAFFPLHDAVELRELEEKWLRMCQVPWKQNVEAVKDYFGEKIALFFLFLGHYTSWLFPAGIIGVFAWINVVSDDNNPSAPIMPFFAAFVAIWSTLLLEYWKRKEKTFAM 375
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: A0A7S3ZQH0_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQH0_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.320e-22 Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 11 MDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVITLVFAPIVVFWAIAMLEFWKRKEKRVAL 412 M ILK GAGL ++KL ILA FP H + + WLV WPW+ P+ ++KDY+GEKIGLYF FLGH T I G++ + ++G + F ++ WA LE WKRK+ R A+ Sbjct: 338 MSILKCDPNENGAGLVLEKLLKAEIILAAFPLHDRSELQACQAKWLVYWSWPWDQPFVKIKDYFGEKIGLYFVFLGHYTEQAGVAAIIGVIVWLAACLTGGVNSPVIPFFCVVMSVWATVFLETWKRKQSRYAM 471
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: A0A835ZD27_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD27_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.120e-22 Identity = 54/128 (42.19%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 17 ILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVI-TLVFAPIVVFWAIAMLEFWKRKE 397 I+ A GG L + KL IL FP H K L+ W Q PW P VKDYYGEKIGLYF +LGH TTWL+P I G++ + V +GN+ +V T F+ V W EFW+R++ Sbjct: 152 IMVAKSSEGGCNLDIVKLLKYKAILGFFPLHDKVELRLLQRAWFRYVQAPWAQPIQDVKDYYGEKIGLYFLWLGHYTTWLLPASICGILAWINVAAAGNDPNVPGTAAFSVFVALWCTMFTEFWRRRQ 279
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Match: A0A7S1U393_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U393_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.060e-21 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 11 MDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRENWLVAKQWPWEAPYDQVKDYYGEKIGLYFHFLGHLTTWLIPLGIAGLVTAMTVYISGNEEHVITLVFAPIVVFWAIAMLEFWKRKEKRVAL 412 + IL+ P GGA LP+DKL+ +G +L FP H ++ + + PW P+D+++DY+GEK+ LYF +L H TTWL I G +T + V + + F + WA+ EFWKRKE A+ Sbjct: 180 LSILRYPGA-GGANLPLDKLQHEGVLLHAFPIHTAHELELVKSGIMSLARMPWSIPHDEIRDYFGEKVALYFVWLSHFTTWLFAAAIMGTITWIDVVAEDSYSATLVPFFCVFMALWAVLFQEFWKRKESTRAM 312 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.132.1 >prot_P-littoralis_Contig10.132.1 ID=prot_P-littoralis_Contig10.132.1|Name=mRNA_P-littoralis_Contig10.132.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=138bp VDQHGHLEGAHVPRRRWASRGQAQAPGENPRPVSEALQTEQAAAPGELARback to top mRNA from alignment at P-littoralis_Contig10:508178..511593- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.132.1 ID=mRNA_P-littoralis_Contig10.132.1|Name=mRNA_P-littoralis_Contig10.132.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3416bp|location=Sequence derived from alignment at P-littoralis_Contig10:508178..511593- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:508178..511593- >mRNA_P-littoralis_Contig10.132.1 ID=mRNA_P-littoralis_Contig10.132.1|Name=mRNA_P-littoralis_Contig10.132.1|organism=Pylaiella littoralis U1_48|type=CDS|length=414bp|location=Sequence derived from alignment at P-littoralis_Contig10:508178..511593- (Pylaiella littoralis U1_48)back to top |