mRNA_P-littoralis_Contig10.131.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: D7FQE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE1_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.320e-55 Identity = 103/137 (75.18%), Postives = 112/137 (81.75%), Query Frame = 1 Query: 1 EPVVGVACERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 EPV+GVACE+SCMSLLATNLTIVFVVQLVVGNLTEVLIP++KYTMR+K+EKR D HGH+ IQRTQAEKGL+LEQYDPIMG LMDYAELAVQFGYITLFVV+FPLAPLLALANNYVE Sbjct: 164 EPVIGVACEKSCMSLLATNLTIVFVVQLVVGNLTEVLIPFIKYTMRVKAEKRGDG-HGHDG------------VPVVSGKNIQRTQAEKGLYLEQYDPIMGALMDYAELAVQFGYITLFVVAFPLAPLLALANNYVE 287
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: A0A6H5KW18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW18_9PHAE) HSP 1 Score: 186 bits (472), Expect = 4.420e-52 Identity = 102/137 (74.45%), Postives = 112/137 (81.75%), Query Frame = 1 Query: 1 EPVVGVACERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 EPV+GVACE+SCMSLLATNLTIVFVVQLVVGNLTEVLIP++KYTMR+K+EKR D +GH+ IQRTQAEKGL+LEQYDPIMG LMDYAELAVQFGYITLFVV+FPLAPLLALANNYVE Sbjct: 684 EPVIGVACEKSCMSLLATNLTIVFVVQLVVGNLTEVLIPFIKYTMRVKTEKRGDG-YGHDG------------VPVVSGKNIQRTQAEKGLYLEQYDPIMGALMDYAELAVQFGYITLFVVAFPLAPLLALANNYVE 807
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: A0A7S2UW13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW13_9STRA) HSP 1 Score: 112 bits (281), Expect = 5.080e-28 Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 1 Query: 1 EPVVGVACERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSE-KRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 +P VG CM LATNL I+++VQL+ GN+TEV++PYVKY M++++E K DE G + + Q TQ E LE+YD +M T+ DYAE+A+QFGY+TLFV + PLAPLLAL +N+VE Sbjct: 60 DPDVGTCSGLDCMEALATNLVIIYMVQLISGNMTEVILPYVKYRMKLRAETKEKKDEKG-------------------PRERTQITQEEIDYALEEYDVMMSTISDYAEMAIQFGYLTLFVAAMPLAPLLALISNWVE 178
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: A0A7S3XWN0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWN0_HETAK) HSP 1 Score: 89.7 bits (221), Expect = 1.930e-18 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 31 SCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLH-------LEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 SCM LA NL I+F+VQLVVGN+ ++++PYV+ R++ E DD I+ T KG L+ YD IMG + DY +A+QFGY++LFV +FPLAPL+ALANNYV Sbjct: 50 SCMRTLAKNLGIIFLVQLVVGNVQDIVVPYVRVKKRLRDE--LDD--------------------------IRNTGKTKGASPVEYEYTLDTYDNIMGPINDYISVAIQFGYLSLFVAAFPLAPLMALANNYVS 155
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: A0A7S2RXH3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXH3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.740e-16 Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 16 VACERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 + C +C S L T L I+F+ ++ GNL EV++P VK ++ K E + I+ T EK E YD ++GT DYAE+ +QFGY TLF+ +FPLA +LAL NNY+E Sbjct: 235 IRCYPNCFSELNTCLGIIFIANIIAGNLAEVVVPIVKARIKEKKESKG------------------------MVLDIKMTDVEKQFIAEPYDQLLGTFKDYAEMIIQFGYCTLFIAAFPLATVLALVNNYIE 342
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: A0A7S3YMB0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YMB0_HETAK) HSP 1 Score: 78.6 bits (192), Expect = 2.570e-14 Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 13 GVACE--RSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 G CE CM LL NL I+++ ++VGNL EV +P++K + +R+A + K + AEK +E YD +MGTL DY+E+AVQFGY+TLFV ++P+APL L N VE Sbjct: 233 GKDCEGGADCMDLLGYNLMIIYLYYIIVGNLQEVGLPWLKKIWK---------------QRKAAKGGALGALSMGRGHKKFLSPAEKEFLMEPYDVMMGTLTDYSEIAVQFGYLTLFVAAWPMAPLFGLVANLVE 352
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: A0A835ZD27_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD27_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 9.520e-14 Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 22 CERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKY-TMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYV 408 C +CM+ LATNL +F+ +L VGNLT+VL+P +K ++ +S D E + AEK LE YD ++G DYAE+A+QFGY TLFV ++PL+ L+A NNY+ Sbjct: 442 CVDTCMNELATNLGAIFLTRLAVGNLTQVLLPLLKARALQRRSAAALDPER-------------------------MPSIAEKEYVLEIYDVMLGPFNDYAEMAIQFGYATLFVAAYPLSCLMAFINNYI 546
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: A0A7S2Y160_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y160_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.050e-13 Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 22 CERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 C SCMS L+TNL +F+ + +VGN+TEV +PY+ R K ++D A D+ + AEK +Y ++GT DY E+ +Q+GY TLFV ++PLA L+ NN++E Sbjct: 58 CVGSCMSQLSTNLGTIFLTRCLVGNITEVGVPYL--AARAKESSESED---------AEPDRTP-------------SMAEKEFFASEYHVMLGTFDDYLEMVIQYGYATLFVAAYPLALLMCFVNNFIE 163
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: A0A397F6J1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F6J1_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.790e-13 Identity = 51/129 (39.53%), Postives = 68/129 (52.71%), Query Frame = 1 Query: 25 ERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 + C+ L +L I+F ++L GN E ++PY+K + + K E G +R +A AE+ +HL YD MG DY E+ +QFGYITLFVVSFPLAP LAL NNY E Sbjct: 60 KGGCLFDLMFSLGIIFGLRLTSGNFFEAVLPYIKRKLAARFRKPDTSEDG--VQRHVSA-------------------AEEQMHLGAYDN-MGIFADYNEMIIQFGYITLFVVSFPLAPFLALLNNYFE 166
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Match: H3GQ58_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQ58_PHYRM) HSP 1 Score: 75.5 bits (184), Expect = 3.390e-13 Identity = 47/129 (36.43%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 25 ERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEKRADDEHGHEAERRANADKXXXXXXXXKKAKIQRTQAEKGLHLEQYDPIMGTLMDYAELAVQFGYITLFVVSFPLAPLLALANNYVE 411 E CM L L I+F++++VVGN TEV +PY+KY ++ SE++A AN ++ ++AK+ ++ + DY E+ +Q+G+I LFVV+FPL PLLALANN +E Sbjct: 660 EDDCMRELRDQLLILFLIRIVVGNTTEVAVPYLKYRYQLFSERKA-----------ANTEEKSGHNYIEEQAKLVPYESNEAFE------------DYNEMVIQYGFINLFVVAFPLTPLLALANNMLE 765 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.131.1 >prot_P-littoralis_Contig10.131.1 ID=prot_P-littoralis_Contig10.131.1|Name=mRNA_P-littoralis_Contig10.131.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=138bp EPVVGVACERSCMSLLATNLTIVFVVQLVVGNLTEVLIPYVKYTMRIKSEback to top mRNA from alignment at P-littoralis_Contig10:501655..503769- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.131.1 ID=mRNA_P-littoralis_Contig10.131.1|Name=mRNA_P-littoralis_Contig10.131.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2115bp|location=Sequence derived from alignment at P-littoralis_Contig10:501655..503769- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:501655..503769- >mRNA_P-littoralis_Contig10.131.1 ID=mRNA_P-littoralis_Contig10.131.1|Name=mRNA_P-littoralis_Contig10.131.1|organism=Pylaiella littoralis U1_48|type=CDS|length=414bp|location=Sequence derived from alignment at P-littoralis_Contig10:501655..503769- (Pylaiella littoralis U1_48)back to top |