mRNA_P-littoralis_Contig10.100.1 (mRNA) Pylaiella littoralis U1_48
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-littoralis_Contig10.100.1 vs. uniprot
Match: A0A6H5JIW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW5_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.300e-24 Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 97 MNALHNVPLKWRLLIGGQVLITAGLVVHRFETVNSMNVERRGAVGEGRFAAPG-VEQPGHARRKDDSSPTRG 309 MNALHNVPLKWRLLIGGQVLITAGL+VHR ET+N+M ER+ A GEGRFA P +E+P ARR+ + S T G Sbjct: 1 MNALHNVPLKWRLLIGGQVLITAGLMVHRMETINTMKEERKTAGGEGRFAPPAPLEEPDRARRRSEGSTTEG 72 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig10.100.1 >prot_P-littoralis_Contig10.100.1 ID=prot_P-littoralis_Contig10.100.1|Name=mRNA_P-littoralis_Contig10.100.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=73bp MNALHNVPLKWRLLIGGQVLITAGLVVHRFETVNSMNVERRGAVGEGRFAback to top mRNA from alignment at P-littoralis_Contig10:432266..433750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig10.100.1 ID=mRNA_P-littoralis_Contig10.100.1|Name=mRNA_P-littoralis_Contig10.100.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1485bp|location=Sequence derived from alignment at P-littoralis_Contig10:432266..433750- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig10:432266..433750- >mRNA_P-littoralis_Contig10.100.1 ID=mRNA_P-littoralis_Contig10.100.1|Name=mRNA_P-littoralis_Contig10.100.1|organism=Pylaiella littoralis U1_48|type=CDS|length=219bp|location=Sequence derived from alignment at P-littoralis_Contig10:432266..433750- (Pylaiella littoralis U1_48)back to top |