mRNA_P-littoralis_Contig1.352.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1.352.2
Unique NamemRNA_P-littoralis_Contig1.352.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: D8LI32_ECTSI (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI32_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 1.610e-157
Identity = 252/275 (91.64%), Postives = 263/275 (95.64%), Query Frame = 2
Query:  233 MSAVEPTMNGKPALAGVSRGPGGG-DGAAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGASPMQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
            MS VEP+ NGK A+AGVSRGPGGG DG AEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA+P+QLLRRVREGGMWWLLVEYDDEYETQGWKGFADEA VSEFA+SVNVGEPL IPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAA DKEQV ALEDELQR+R+ELTDKEESWR  +QK+V+E E+LKREGGDTALAAQWRQRYEKLSLEK
Sbjct:    1 MSVVEPSTNGKAAMAGVSRGPGGGGDGTAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGATPLQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEAAVSEFANSVNVGEPLNIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAVDKEQVHALEDELQRVRDELTDKEESWRQAYQKQVKETEVLKREGGDTALAAQWRQRYEKLSLEK 275          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: H3GH33_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH33_PHYRM)

HSP 1 Score: 144 bits (363), Expect = 2.200e-34
Identity = 90/252 (35.71%), Postives = 150/252 (59.52%), Query Frame = 2
Query:  317 EQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA-SPMQLLRRVREGGMWWLLVEYDDEYETQ-----GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
            + + ++ET  K KRLL++A+RSI+ +++++ EKD  +  LR+ L  ++ AR      A   SP QLL +V  GG+ W LVEY DE E +      W  F DE  +  +AD  + GEPL +P  SL+P E   V +  ++++  ++EE+R++RV+SE+ RKQ++AEIR++SA  +A++  +I     + + +  +A    L + + E  ++E  WR +  K +++ E L    G T LA +WR+RYE+   EK
Sbjct:   13 KMQEMEETETKLKRLLAMAKRSIDNSKQELVEKDEVIEKLRDELSKSQQARHSWVVDASTRSPRQLLHKVSHGGLLWCLVEYADEIEFEDSKEFAWHCFRDEGEIQAYADRAS-GEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANVMAKQTEQILETDLSGELQSSKAQVRRLTKAQAEAEERESDWRRKFDKLMKDYEKLSGTMGGTVLAMEWRERYEQSVREK 263          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A6A3FS57_9STRA (GRIP domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FS57_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.510e-33
Identity = 91/258 (35.27%), Postives = 154/258 (59.69%), Query Frame = 2
Query:  314 AEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA------SPMQLLRRVREGGMWWLLVEYDDEYETQ-----GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
            A+ + +++T  K KRLL++A+RSI+ ++++I EKD  +  LRE L     A+ R  +H+ A       P QLL +V  G + W LVEY DE E        W  F  EA +  +A+  + GEPL +P  SL+P E   V +  ++++  ++EE+R++RV+SE+ RKQ++AEIR++SA ++A++  +IS    + + +  +A    L + + E  ++E  WR + +K +++ E L    G+T LA +WR+RYE+   EK
Sbjct:   67 AKLQEMEDTENKLKRLLAMAKRSIDNSKQEIAEKDAAIQQLREEL-----AKSRQTQHSWAVDAATRDPRQLLHKVSHGNLLWCLVEYADESELDEAKEFAWHCFRSEAEIQAYANRAS-GEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANAMAKQTEQISETDLSGELQSSKAQIRRLTKAQAEAEERESDWRRKFEKLMKDYEKLSGTMGETVLAMEWRERYEQSVREK 318          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A7S2S2V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2V8_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.040e-31
Identity = 101/284 (35.56%), Postives = 158/284 (55.63%), Query Frame = 2
Query:  293 PGGGDG--AAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRR----------------------DDEHAGAS------PMQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
            PGGG    AA  +   + + ++KRLL  +R+ +E  Q+++ EK+  +  L   L      R+                       +   +GA       P + LRRV   G   +L E++   +   W+ F ++  +S+F    + GEPL +P   L+PEES  V E+A+  VA I EE+R+FRV++E+ RKQ++AE RQ +A SIAE+QRRI+GQ   ++ ++ +   +++ +LR +L D+EE WR +  K  +E E L+ EG + ALAAQWRQRYE+ S EK
Sbjct:   22 PGGGPATPAAPGDKAAQQINQYKRLLIQSRQMLENYQKKLQEKERIVEHLAHELQTTRQQRQSAXXXXXXXXXXXXXXXXXASTAEPHPSGAGDSRKAVPHRALRRVDVNGGISVLFEFETGEDQ--WRIFHNDLELSDFIRR-DSGEPLALPLACLTPEESEHVAEEAKNSVAKITEEFRRFRVRAEISRKQKDAEARQATASSIAEQQRRINGQDVESELQKARLQAEQVVQLREQLADQEERWRKQCDKLSRENEKLRSEGSEAALAAQWRQRYEQCSREK 302          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A2P4YJD4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJD4_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.920e-31
Identity = 86/253 (33.99%), Postives = 150/253 (59.29%), Query Frame = 2
Query:  314 AEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA-SPMQLLRRVREGGMWWLLVEYDDEYETQ-----GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
            A+ + ++ET  K KRLL++A+RSI+ +++++TEKD  +  LR+ L  ++ AR      A    P QLL +V  G + W LVEY +E E        W  F  E  +  +A+  + GEPL +P  S++P E   V +  ++++  ++EE+R++RV+SE+ RKQ++AEIR++S   +A++  +IS    + + +  +A    L + + E  ++E  WR + +K +++ E L    G+T LA +WR+RYE+   EK
Sbjct:   57 AKMQEMEETENKLKRLLAMAKRSIDNSKQELTEKDETIQKLRDELVKSQQARHSWFVDASTRDPRQLLHKVAHGNLLWCLVEYANESEFDDSKELAWHCFRTEEEIQAYANRAS-GEPLTLPDFSMTPYEVERVKKGLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSMNVMAKQTEQISETDLSGELQLSKAQIRRLTKAQTEAEERESDWRRKFEKLMKDYEKLSGTMGETVLAMEWRERYEQSVREK 308          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A8K1CW38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW38_PYTOL)

HSP 1 Score: 137 bits (344), Expect = 4.740e-30
Identity = 82/253 (32.41%), Postives = 152/253 (60.08%), Query Frame = 2
Query:  311 AAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRR-DDEHAGASPMQLLRRVREGGMWWLLVEY--DDEYETQ--GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
            +A+ + ++ET  K KRLL++A+RSI+ +++++ +KD ++  LR  L    +A    +       P ++L +V +G   W LVEY  DD  +T    W  F  E  +  +A+  N GEPL +P +SL+P E   + +D ++++  ++EE+R++RV++E+ RKQ++AEIR++SA ++A +  +IS    + + +  +A    L + + E  ++E  WR + +K +++ E L    G+T LA +WR+RYE+   E+
Sbjct:   51 SAKIQEMEETETKLKRLLAMAKRSIDNSKQELADKDAEIEQLRAELATKAHASHTWETNETTRDPRRILSKVAQGNTLWCLVEYASDDSDDTSDFAWHRFQSEEQIKAYANRAN-GEPLALPSLSLTPFEVERMKKDLKEEIDRVQEEFRRYRVRAEITRKQKDAEIRKMSANAVARQAEQISETDLSGELQSARAQIRRLSKQQAETEEREAEWRRKFEKLMKDYEKLSGTMGETVLATEWRERYEQAVRER 302          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A7S2G525_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G525_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.130e-28
Identity = 70/174 (40.23%), Postives = 116/174 (66.67%), Query Frame = 2
Query:  329 VQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGASPMQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQ 850
            +Q+ L ++K+LL  +R+++E+ Q QI EKD  + +LR  L  + +            P++ LR +   G  W+L ++++E + + W+ F  E  + +F    + GEP++IPP+SL+PEESA V+ +AR+ V  I EE+R++RVKSE+ RKQ++AE +QV+A SIAE+Q+RI+GQ
Sbjct:    3 MQDKLNQYKKLLIQSRQTLEKYQLQIVEKDRMVDSLRSELEKSASRVELATPLGQKKPVRALRCIHHSGKIWVLFQFEEEGDEE-WRSFMSEVELHDFVRR-DSGEPVRIPPISLAPEESAKVVTEARQSVTKISEEFRRYRVKSEINRKQKDAEAKQVAASSIAEQQQRINGQ 174          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A2D4C3D3_PYTIN (GRIP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3D3_PYTIN)

HSP 1 Score: 128 bits (322), Expect = 1.930e-28
Identity = 81/254 (31.89%), Postives = 150/254 (59.06%), Query Frame = 2
Query:  311 AAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGA-AENARRRDDEHAGASPMQLLRRVREGGMWWLLVEYDDEYETQG-----WKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
            +A+ + ++ET AK KRLL++A+RSI+ +++++ EKD ++  LRE L      A   + + +   P + + +V  G   W  VEY  E++        W  F  E  V  +A ++  GEPL IP +SL+P E  +V +D ++++  ++EE+R++RV++E+ RKQ++AE++++SA ++A +  +IS    + + +  +A    L +   E  ++E  WR + +K  ++ E L    G+T LA +WR+RYE+   +K
Sbjct:   40 SAKLQEMEETEAKLKRLLAMAKRSIDNSKQELAEKDTEIDHLREELKKKVAVAHSWEPDESTRPPRRFIYKVAHGSSIWCYVEYASEHDHDAQRDYAWHRFHSEEQVKAYA-ALASGEPLVIPALSLTPFEVESVKKDLKEEIDRVQEEFRRYRVRAEITRKQKDAELKKMSANAVARQAEQISETDLSGELQSARAQIRLLTKQNTETEEREADWRRKFEKLYKDYEKLSGTMGETVLATEWRERYEQAVRDK 292          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A3R7KVI4_9STRA (GRIP domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KVI4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.430e-28
Identity = 82/242 (33.88%), Postives = 144/242 (59.50%), Query Frame = 2
Query:  311 AAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA-SPMQLLRRVREGGMWWLLVEYDDEYETQ-----GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQ 1018
            +A+ + ++ET  K KRLL++A+RSI+ ++++++EKD  +  LRE +  +   R      A    P QLL +V  GG+ W LVEY +E E        W  F DEA +  +A+  + GEPL +P  SL+P E   V +  ++++  ++EE+R++RV+SE+ RKQ++AEIR++SA  +A++  +IS    + + +  +A    L + + E  ++E  WR + +K +++ E L    G+T LA +
Sbjct:   65 SAKIQEMEETETKLKRLLAMAKRSIDNSKQELSEKDEAIQNLREEVSRSAQTRHSWSVDASTRDPRQLLHKVAHGGLLWCLVEYANESEFDEAKEVAWHCFRDEAEIQAYANRAS-GEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANVMAKQTEQISETDLSGELQSSKAQIRRLTKAQTEAEERESEWRRKFEKLMKDYEKLSGTMGETVLAME 305          
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A7S4D4P1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4P1_HETAK)

HSP 1 Score: 122 bits (307), Expect = 4.700e-28
Identity = 80/226 (35.40%), Postives = 131/226 (57.96%), Query Frame = 2
Query:  305 DGAAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREAL------GAAENARRRDDEHAGASPMQLLRRVREGGMWWLLVEY----DDEYETQGWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEH 952
            D A++Q  ++ET+ K+K+LLS+AR+ +E+NQR +++KD Q+  L+  L       A ENA+ R  E    +P +++RRV + G+ W+L E+     D      W+ F     + +F   V+ GEP++IPP  L+ +E+   + DA+ +V   +EE+RK+++KSE+ RKQ+EAE +Q     +AE  RRI+G    A   + +    +   LR EL  +E  WR  H
Sbjct:   20 DPASQQ--LKETILKYKKLLSMARQGLEDNQRHLSDKDEQIRQLQHELESSKQRNAKENAKTRGLE---MNPKRIVRRVDQDGVIWVLFEWYSVETDARSPPSWREFNSYGELEDFVQCVS-GEPIEIPPACLTSDETQQKINDAKAEVKKTQEEFRKYKIKSEIARKQKEAETKQALGAGLAEASRRIAGADLEAQARRGREARAQADALRQELAQQELMWRKAH 239          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI32_ECTSI1.610e-15791.64GRIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
H3GH33_PHYRM2.200e-3435.71Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3FS57_9STRA2.510e-3335.27GRIP domain-containing protein n=16 Tax=Phytophtho... [more]
A0A7S2S2V8_9STRA1.040e-3135.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2P4YJD4_9STRA1.920e-3133.99Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A8K1CW38_PYTOL4.740e-3032.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2G525_9STRA1.130e-2840.23Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A2D4C3D3_PYTIN1.930e-2831.89GRIP domain-containing protein n=1 Tax=Pythium ins... [more]
A0A3R7KVI4_9STRA3.430e-2833.88GRIP domain-containing protein n=3 Tax=Phytophthor... [more]
A0A7S4D4P1_HETAK4.700e-2835.40Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1553532..1558391 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LI32
PFAMsGRIP
Model size1744
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.26e-161
EggNOG OGs2CN6M@1|root,2QU6G@2759|Eukaryota
DescriptionGRIP domain
Cds size1152
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.352.2prot_P-littoralis_Contig1.352.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1 1553539..1557806 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789321.4794383-UTR-P-littoralis_Contig1:1553531..15535381680789321.4794383-UTR-P-littoralis_Contig1:1553531..1553538Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1553532..1553538 +
1680789321.546473-UTR-P-littoralis_Contig1:1557806..15583911680789321.546473-UTR-P-littoralis_Contig1:1557806..1558391Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1557807..1558391 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789321.4927874-CDS-P-littoralis_Contig1:1553538..15538651680789321.4927874-CDS-P-littoralis_Contig1:1553538..1553865Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1553539..1553865 +
1680789321.5048907-CDS-P-littoralis_Contig1:1554138..15542781680789321.5048907-CDS-P-littoralis_Contig1:1554138..1554278Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1554139..1554278 +
1680789321.5153828-CDS-P-littoralis_Contig1:1555911..15561341680789321.5153828-CDS-P-littoralis_Contig1:1555911..1556134Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1555912..1556134 +
1680789321.5259068-CDS-P-littoralis_Contig1:1556469..15567061680789321.5259068-CDS-P-littoralis_Contig1:1556469..1556706Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1556470..1556706 +
1680789321.536077-CDS-P-littoralis_Contig1:1557581..15578061680789321.536077-CDS-P-littoralis_Contig1:1557581..1557806Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1557582..1557806 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1.352.2

>prot_P-littoralis_Contig1.352.2 ID=prot_P-littoralis_Contig1.352.2|Name=mRNA_P-littoralis_Contig1.352.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=384bp
MMRWTRDSPGGEAASPFSVFLPFYFLPEKGVPIKTIEITMRGHERKFRRT
QRSSPACCVLYPGVTSVVLAPRFGHMSAVEPTMNGKPALAGVSRGPGGGD
GAAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAA
ENARRRDDEHAGASPMQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEA
TVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRV
KSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRL
RNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEKV
VVHLWLLLLVLFVFVMLMFYRHPPLVCLTPCHV*
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mRNA from alignment at P-littoralis_Contig1:1553532..1558391+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1.352.2 ID=mRNA_P-littoralis_Contig1.352.2|Name=mRNA_P-littoralis_Contig1.352.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4860bp|location=Sequence derived from alignment at P-littoralis_Contig1:1553532..1558391+ (Pylaiella littoralis U1_48)
CGCGTCAATGATGCGCTGGACCCGAGACAGCCCGGGTGGAGAAGCAGCTT CGCCTTTTTCTGTCTTTTTGCCTTTTTACTTTTTACCCGAGAAGGGAGTT CCAATCAAAACGATAGAGATTACTATGAGGGGACACGAACGGAAATTCCG GCGCACACAGCGCAGCAGCCCTGCCTGCTGTGTCCTCTATCCCGGAGTGA CTTCGGTTGTGCTTGCACCGCGCTTTGGACACATGTCTGCGGTTGAGCCG ACAATGAATGGCAAGCCTGCTTTAGCTGGGGTATCGAGGGGGCCGGGAGG TGGAGATGGTGCGGCTGAACAGGAAAACGTTCAGGTTTGGACTCCAAGAT TGCACAGGCATCATACTTCTATGATAGATACATGGAACAAAACGTTTTTA GTTGGTTCGTTTTCCTGTTTCTGTCTGCCTCTGCTGCCGCATTTGGTTCC TCCGTGAAGTGCCGACTGCTGTACTCCTTTAGTCACAACTGCATTATAGG CAATGCTTTACACCAGAGGACATCGCGCACACCTTGCTGAGAGATGAGTG TGTCCACACCTTGTCCGCCCCCTTTCCTCTCCGGGTTTTGTTGGCAATCA CCTGTAGGAAACGCTTGCGAAGTTCAAGAGGTTGCTCTCGCTGGCCCGCC GAAGCATCGAGGAGAACCAGAGACAGATCACAGAGAAGGACGGGCAGCTC GCCGCGCTGAGAGAAGCGCTAGGAGCTGCGGAGAACGCTCGCCGAAGGTA TTGTCTATGGTATTTGAGTTGACTTCACGTGTGCGTGTTGAGCATGCACT CTTGTGCCTTGTTTCGTTGTAAAAGCGCCCTTTTTGTCACGGACGGTATC GACTGCCTGCTGCTGTAGCCGTCACACCTTTCGAAAAGTGATGGGGTTAT AATAAGGCGGTATACACGGCTGACCGTGGGGCATACCTGGCACTGCTGTT TATCAAAACCAGGCTGCTGCAGGACTCTGTAGCATATGTATATAGGACAA ACACAAACGCAGTTTTTTTGTCAGTACTTGTAGCCTTTACAAAGGAGACC TTAGGAAGTGGTGAGTCATGAGTAAAGTCCATATCTATTGTTCAAACAGC AGAGGGGATGCCGCTTGAAAGTAGAAGAGGTTTTACTTCCCCAAATGCCG TCCTTCTGCTGCAGCAGTGCAATACTGCTCTAGTGCCACAAACGCCACAG CACTGGCAACCTGGTTCGAGGGTGACCACGGCCGGTGCGAGTCCGAGCAG CCATGCTTTCCCACGGCAATCTAGCTATTGGCGTGAATTTCCTCGTCGAT TGTGGTGCCTCAACCGATAAATCTAAGATCTAAATAGGGCACTATTTTGC GGGGCAACACATGACAACACATGAAGACAGCCGTGGCAAATACGCCTCCA AGTCACGAAGAAACCTCGTTTGTAACTTCCCCCCATAGCCTATGTAACTC ATGTAAAGAAATATACTGAACAAATCATGGAAATGGCGAAATATCTGATG GATATGGTTGGCTAATACCCCAAATCGATGTCGCCATCTCATTGGCAGTC ATCAACAGTCCTTGTTGTGTTTTTCCACGTTCCACATGGCTGATGTTGTG TGAGAGCTGGGTGTTGTTGCTGTTGTTCCGCGGCGACGTCGGGCGAAAGA ACGTGCAGATAAGTGGCACTACCGTGGGACGACAGCAGTACCGCCGTACA GAAGGAGTCAGAGCCGGCGATTGCCAAAGCATATACCAGGACAAACGATG TCGAACGCGAAAGCTCGCGGGAACAGGAGAAGCAAAGCAAAGTGTTTAAC ACGCGAAATAAACTGCTACAGCAGTGTCAGGCTTGATACGAAGTTCTACG TAGCTCGCAGGGTTGGTACTGCTCCTGCTGCTGATGGAGGCTGCTGCTGT TGTTTTGGGTTAGGGTTAGGGTTAGGGTTAGGTACCGTTCCGTTCTCTCA CACTTCGTATTCAACTTGTGCGAGCCGCTGCGAGCTGCTGCTGATTGCCG CGACAATAACAGTACAGTACAGGGCATGGTACAGAGGTGACGGAGCACGG AACTCACGCAGCCATCCCGCCACTAGCAGTGCGCTTCAGCAGGAGCAACG ACAACCCAAGCCAGGGCCCCCGTTTCTCTGGTAATGCGACGGTTTCGGGG TTGCCCGACGCCTGTCCCCTAATTCTACTCCTCATATGAGGCCATAATCT TCCTCAACCCCCTTATCATAATCCTGGCACCAGCGTTTCTTAATTTTATT TCGCCATTCCAGTACTAAATTTGGTATGTTAATTTACACAGACTGCATAG GCGCCTCTCCCCCGCCTCCTCACAACCCCAACTCAACGGCAATCTCAAAC CGCAGCCTTCCAATTTTTTGTCTACGACAGAGATGACGAACATGCGGGAG CTTCGCCCATGCAGCTCCTCCGAAGGGTACGCGAGGGGGGCATGTGGTGG CTACTGGTGGAGTACGACGACGAGTACGAGACGCAAGGCTGGAAAGGTTT CGCAGACGAAGCGACCGTCTCTGAGTTCGCCGACAGCGTCAACGTGGGGG AGCCGCTCAAGATTCCTCCTGTCTCGCTGTCTCCGGAGGAATCGGCGACG GTGGTGAGTGCGATATGTGCGGTAGGGAGCACCGCGGGGGGGGTTAGGCG GGGGGTCAGGGTACCCCTGATGGCGCGCGGACGTAGCAACGCTTTCGGAA TATTACTCGTCAACACCTGCTCTGTAGATGGAGGAAGGGATATAAAACAT ACAAAATGTACGAATATCGCGGAGATATACCCAGAAAGTTCCGATGATTT GTTGCTTGTCGATGAAAATCCCACCAGGGGTCTACCTTTCCTCTTTTCTC CGTCCCCGAACACCCGTAGCACCGCTGGCGTCACCGGCATCCTGCTCTTC ACCTCGTTGCATCACTCGCCGTCCCTTCGCCCCGCTAGTTGGAAGATGCC CGGAAGCAGGTGGCGAGCATACGCGAGGAGTACCGAAAATTCCGGGTGAA GTCGGAGCTGGGGAGGAAGCAGAGGGAGGCTGAGATCCGGCAGGTGTCGG CGGAGAGCATCGCGGAGAAGCAGCGGCGTATCTCTGGGCAGGGCGCGGCT GCGGACAAGGAGCAGGTGCAGGCGCTGGAGGACGAGTTACAGCGCCTTCG GAACGAACTCACCGACAAAGAGGAGGTGACGACAAAGTTATGCGGAGGTT TAGCTGCATTGAAGAAGAATTTCAACCCATGCGAGGAATACCATTGATTG CTGAAGGCAGCCGTTTTGTCTGGTGAGCTACCGAGGTATACTGGTATGTT CTGGTGGTACCGGATAGGTTTGATCTGATACCGAACATGGACATCTGATC CAACATGTGAACATGTGTCACCAACCTGATAATCACCATTCGAAAATAAC ATGCCAGCAAGAGGCGGTGCTAAGTGGAACTGCTGCGTATACGAGGATTT GACCGGCATCGACGTGTGCCCAGTCACGCTGGCGACGTGGCTAAACAATC GGTTCGTCTCCCCCGTTCTTCCATGCCCGTTGGTCTACCTTGCTAGATGT GCCTCAAGTCATATTCTCACAGGAACTCTTCATGAATCAGCCGCCATGCT TTGCGCCCTCTCGACTGCACACACAAGAGCCTTGCAGAATGCGATTGGCG TCACGGTCGATCGAGCCAACCCTGATCACGTCGAGGCCTTTCAACTACAT AATGTCTTATTGGTGATTTCCGTCTCTGAACAAAGTTCGACTCGATAGAA AGTCAACGAGGGAGAAGGACGGTCGAACTCTTCCCGCGAAAGAAATGAAG GCAACCACCACCGTAGGAGAAAGATGGAGAACAAAATAATCTTGTGTGAC CTCCACTGATGCTCTGAGGTACACCCAAAGGTGTAGGCATAGACTGGCGT CCAGCCTAGATGAGACAGCATTCACACACAAAACACACAAGACATAACAC AAATCTCCAGCCAACGATGCGATACGTTGCCTTTCTTATAAAGTCGCTGA TAGTTGTTGATTTTTGCCCGTCTTTTCTTGTCTGTCGGCGGTTCGAGCAG AGCTGGAGACACGAACACCAAAAACGGGTGCAGGAGATCGAGCTGTTGAA GAGAGAGGGGGGCGACACCGCCCTTGCCGCCCAGTGGCGGCAGCGCTACG AGAAGCTCAGCTTGGAAAAGGTTGTAGTACATTTGTGGTTGCTGTTGCTG GTGTTGTTTGTGTTCGTCATGTTAATGTTTTATCGGCACCCCCCACTGGT GTGTCTCACTCCGTGCCATGTGTAGTTGAGTTGGAGTTTTCGATACGGGT ATTGGCTCGTCTTTCGCTCCGAGAAGGTAGAAGCGTGGACGAGATACGAG TTTTAGTTTTTGTTGCTGTTGGACGGAGGCAGCGACGGAGAAGGGAAAGC TTCCTCACGCCCCTGAAGCGTTCCATCTAACGTGTCGTTTCGTCTTTCTT TCGAAATTTCTAGGAACGCACCTTGGCTGAACACCATAGAGACGTGTGTG GTCGACTTTGTGTTTGATACTCACCCAACCAACAGAGGCATGTCGTGGCA ACGTTCACGGAGTATCAATGGTCTCCGGATGGCCTCTGTAGCAGTGGTGT TCAGTGTCGAACTTCGCAGGCTCTCAGCAGCACAAGAGTGTGCAGAGGAT GCCCTGCTGTGTGGAATGCTGCTACAAATTGCAGCAGTTGATACGTCTCT TGAACAGCAGTAGAAAACAAGTGAGCGTCACCCAAAACCTAGATATTGAC CTACAACACTGTTGTATTTGGCACCTCGTTTTGTCTCCGCTATTTTGGTT CTTCAGGAAGACGCGATGGCGAAGCTGGAGATGTTTAAGGGTGACGGAAG TGGTTCTGGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1:1553532..1558391+

>mRNA_P-littoralis_Contig1.352.2 ID=mRNA_P-littoralis_Contig1.352.2|Name=mRNA_P-littoralis_Contig1.352.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1152bp|location=Sequence derived from alignment at P-littoralis_Contig1:1553532..1558391+ (Pylaiella littoralis U1_48)
ATGATGCGCTGGACCCGAGACAGCCCGGGTGGAGAAGCAGCTTCGCCTTT
TTCTGTCTTTTTGCCTTTTTACTTTTTACCCGAGAAGGGAGTTCCAATCA
AAACGATAGAGATTACTATGAGGGGACACGAACGGAAATTCCGGCGCACA
CAGCGCAGCAGCCCTGCCTGCTGTGTCCTCTATCCCGGAGTGACTTCGGT
TGTGCTTGCACCGCGCTTTGGACACATGTCTGCGGTTGAGCCGACAATGA
ATGGCAAGCCTGCTTTAGCTGGGGTATCGAGGGGGCCGGGAGGTGGAGAT
GGTGCGGCTGAACAGGAAAACGTTCAGGAAACGCTTGCGAAGTTCAAGAG
GTTGCTCTCGCTGGCCCGCCGAAGCATCGAGGAGAACCAGAGACAGATCA
CAGAGAAGGACGGGCAGCTCGCCGCGCTGAGAGAAGCGCTAGGAGCTGCG
GAGAACGCTCGCCGAAGAGATGACGAACATGCGGGAGCTTCGCCCATGCA
GCTCCTCCGAAGGGTACGCGAGGGGGGCATGTGGTGGCTACTGGTGGAGT
ACGACGACGAGTACGAGACGCAAGGCTGGAAAGGTTTCGCAGACGAAGCG
ACCGTCTCTGAGTTCGCCGACAGCGTCAACGTGGGGGAGCCGCTCAAGAT
TCCTCCTGTCTCGCTGTCTCCGGAGGAATCGGCGACGGTGTTGGAAGATG
CCCGGAAGCAGGTGGCGAGCATACGCGAGGAGTACCGAAAATTCCGGGTG
AAGTCGGAGCTGGGGAGGAAGCAGAGGGAGGCTGAGATCCGGCAGGTGTC
GGCGGAGAGCATCGCGGAGAAGCAGCGGCGTATCTCTGGGCAGGGCGCGG
CTGCGGACAAGGAGCAGGTGCAGGCGCTGGAGGACGAGTTACAGCGCCTT
CGGAACGAACTCACCGACAAAGAGGAGAGCTGGAGACACGAACACCAAAA
ACGGGTGCAGGAGATCGAGCTGTTGAAGAGAGAGGGGGGCGACACCGCCC
TTGCCGCCCAGTGGCGGCAGCGCTACGAGAAGCTCAGCTTGGAAAAGGTT
GTAGTACATTTGTGGTTGCTGTTGCTGGTGTTGTTTGTGTTCGTCATGTT
AATGTTTTATCGGCACCCCCCACTGGTGTGTCTCACTCCGTGCCATGTGT
AG
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