mRNA_P-littoralis_Contig1.313.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 117 bits (293), Expect = 6.710e-30 Identity = 60/133 (45.11%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNKS-GSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
GKEK R+T+ LAV GD +KV R I+KG P + G A +P KNS+++E LP+ R+ GYP GG+S GVQ+ SWCD + W+ + RP + S QRP +LVLDDF+CH+++ F +L A T+
Sbjct: 87 GKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTI 219
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE) HSP 1 Score: 115 bits (288), Expect = 6.540e-29 Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
GKEK R+T+VLAV DG+KV PRII+KG PF+ T + G + P KNS+++E P R +PA G+S GVQ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+
Sbjct: 10 GKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHAHPANGMSFGVQGKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTI 142
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.380e-28 Identity = 62/133 (46.62%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
GKEK R+T+VLAV DG+KV PRII+KG PF T + G + P KNS+++E P R G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+
Sbjct: 149 GKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTI 281
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.940e-27 Identity = 64/134 (47.76%), Postives = 84/134 (62.69%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG-GTNKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
GKEK R+T+ LAV DG+KV RII+KG PFV T G A +P KNS+++E LP R+ G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+
Sbjct: 303 GKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTI 435
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 114 bits (284), Expect = 2.230e-27 Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG-GTNKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
GKEK R+T+VLAV DG+KV PRII+KG PF+ + G + P KNS+++E P R +PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E + L A T+
Sbjct: 149 GKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTI 281
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 115 bits (287), Expect = 2.620e-27 Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG-GTNKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
GKEK R+T+ LAV DG KV RII+KG PFV T G A +P KNS+++E LP R+ G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+
Sbjct: 262 GKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTI 394
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 114 bits (286), Expect = 4.520e-27 Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
G EK R+T+VLAV DG+KV PRII++G PF+ T + G + +P KN +++E P R G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH +E F L A T+
Sbjct: 344 GNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTI 476
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 112 bits (279), Expect = 3.430e-26 Identity = 63/134 (47.01%), Postives = 83/134 (61.94%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG-GTNKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
GKEK R+T+ LAV DG+KV RII+KG PFV T G A +P KNS+++E LP R+ G P G+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+
Sbjct: 274 GKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTI 406
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 110 bits (276), Expect = 3.680e-26 Identity = 59/133 (44.36%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
G+EK R+T+VLAV DG+KV RII+ G PF+ T + G + P KNS+++E P R G+PA G+S GVQ+ SW D + + W + + RP + S QRP +LVLDDF+CH++E F L A T+
Sbjct: 83 GEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTI 215
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 107 bits (268), Expect = 5.210e-26 Identity = 58/133 (43.61%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTL 393
GKE+ R+ +VLAV DG+KV PRI +KG PF T + G + P KNS+++E P R G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+ H++E F L A T+
Sbjct: 30 GKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTI 162 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.313.1 >prot_P-littoralis_Contig1.313.1 ID=prot_P-littoralis_Contig1.313.1|Name=mRNA_P-littoralis_Contig1.313.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNKSGSAKKPGKNSLSback to top mRNA from alignment at P-littoralis_Contig1:1444392..1444785- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.313.1 ID=mRNA_P-littoralis_Contig1.313.1|Name=mRNA_P-littoralis_Contig1.313.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=394bp|location=Sequence derived from alignment at P-littoralis_Contig1:1444392..1444785- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1444392..1444785- >mRNA_P-littoralis_Contig1.313.1 ID=mRNA_P-littoralis_Contig1.313.1|Name=mRNA_P-littoralis_Contig1.313.1|organism=Pylaiella littoralis U1_48|type=CDS|length=393bp|location=Sequence derived from alignment at P-littoralis_Contig1:1444392..1444785- (Pylaiella littoralis U1_48)back to top |